Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00447 TTAATTTTTCCATCTCTCTAAAGACCAAGATGGGACTTGGGAGGGACAGTGTGTGAACAGTATAGAAGATAAACAAATCTCTCTTTCCCTTGCCTTGCTTTCTCCTTCTTCTTCTTCCTTCTCTGCTGGGTTGGATTTTTTGGGTGAGTGGTTATGGCTTGGCAAATGGCAAGGTTTCCTTTTTGGATGTGGGTCATAATTTTCTGATCTGGGGTTTGATTATTATATCTCCCTTTTTGAGAGCTTGAAGAGGAAGCTTTGGAATTGGGGAAGCAAAAATCTCGTAGCCTTCATCTTTTGTTTTGGTGATGATGATGATGATTGATAGTGTAATGAAGAAGAAGGAGATATCCTTTTGACCAGAGAAGAAAAGAAGAAAAAGATCAGATAAAAGTAAGAATTTAAAAGAAAAGAAAAGAAAAGAAAAGCAACAAAGTGAGCAAACATTGCTGCCTGTGATTGTCAATGAGAGCGACAGTGTAGTGTAGGAAGGCGAAAGCAAAAAAAGAAAAAGAGAAACAAACAACAAACACCTCTCCTCTCTTCTCTCTGTTTTCTCTTCCTCACTTTTTCTTCCTTTTCCTTCCCACACGTTCCTCTGGTCTCTCCCCTGTTCAACTTTGCTTTGTTTTTTATACGATTTTAATCTCTTCATTTATCAGATTCAGATTCATCTTCAGTTTTCCCAAAAGGGTTTTGCCAAAATGCCGATGTACCAGCCTGCTACTTGGAGAGAAGGGGATCCCAAGCTCGTCGTCGGCTGCGGTGCGCAGATTCTAGATCTGGAAACTGTGGTCAAAGATGGGATTCTCGGTGGAGGCGGGGGTATAATTTGCGGCGGTGGTGAGAAATTGGATCTGAAGGACATGATTGAGGAGTTGGAATCGTCCATAGAGGTTCCATCGGTGTTCATTTGCCCAATCTCGCTCGAACCCATGCAAGATCCAGTGACCCTCTGTTCCGGGCAGACCTACGAGCGGTCCAACATTCTGAAATGGTTCTCTTTAGGGCATTTAACTTGTCCCACCACAATGCAAGAGCTTTGGGATGATTCCGTCACACCGAATCGGACCCTTCACCAGTTGATTCACACCTGGTTTTCGCAAAAGTACTTGGCATTGAAGAAGAGATCAGAGGATGTGCAGGGGAGAGTTTTAGAGCTTTTGGATTCGTTGAAGAAGGTCAAGGGTCAAGCTAGGGTTCAGTCCCTCAAAGATCTCCGACATGTCGTCACCACCCATTCCTCCGCCAAGAAGATGGTGGTCGACAACGGCGGTGTCGCTCTAATCTCCTCTCTTTTGGGTTCTTTCACCTCTCACGCAGTTGGGTCCGAAGCCGTGGGGATCCTCGTAAATTTGGATCTCGATTCAGAGTTGAAGAAGAATCTGATTCAACCCACAAGAATTTCCCTAATTGCAGATATTTTAAACGAAGGGTCCATCGAAACCAAGATTAATTGCACAAAATTCATCAAGATGTTGATTGTGGGTGAGGATTTAAGAACAGAGAACGTTTCTAGTTTAAGTCTCCTCGTCGGATTGTTGAGAATGGTGAAGGATCAGAGACACCCAAATGGTGTAACCGCCGGACTCAGTTTACTCCGAACGCTCTGTTCAAACGAACCAATCAGGAAGCAACTCGTTAGTATCGGCGCCGTCGCAAAACTCGGCGGCGCCCTCTCAAACTTAAACACCGATTGCTTGGAATCGGCGCTTTATATTCTCGACGTTTTGTCATCCCTTCCAGAGGGGAGATTAGCGTTGAAGAACTGTGAAGATACGATTAGGAATTTGGTGAAATTGTTGATGAAAGTATCAGAGATTTGTACTCAATTTGCGTTATCGATTTTATGGGCGGTGTTCAAGCTAGCGCCAGAGGAATGTTCGGTGCTTGCGGTGGAGGCTGGATTAGCGGCGAAATTGCTGCTTGTAATCCAAAGTGGGTGCAATCCAGAGCTTAAACAGAGATCTGCAGAGCTATTGAAATTGTGTAGTCTAAATTACCCAGATTCTATCTTCATTTCTAAATGTAAGCTTACAAGAACTATACAATAAAAGATAGCTTGTCAAAATTGTTCATACACCCCTTTTTTTTCCTTTTAATTTTTGGTTTATTATGCATAATTTGATTCTTCAAATAGTCTTTGTGAATGTGAATGAATGCGAGAAGCAAATTTTGATTCCCATGTT 2189 42.85 MPMYQPATWREGDPKLVVGCGAQILDLETVVKDGILGGGGGIICGGGEKLDLKDMIEELESSIEVPSVFICPISLEPMQDPVTLCSGQTYERSNILKWFSLGHLTCPTTMQELWDDSVTPNRTLHQLIHTWFSQKYLALKKRSEDVQGRVLELLDSLKKVKGQARVQSLKDLRHVVTTHSSAKKMVVDNGGVALISSLLGSFTSHAVGSEAVGILVNLDLDSELKKNLIQPTRISLIADILNEGSIETKINCTKFIKMLIVGEDLRTENVSSLSLLVGLLRMVKDQRHPNGVTAGLSLLRTLCSNEPIRKQLVSIGAVAKLGGALSNLNTDCLESALYILDVLSSLPEGRLALKNCEDTIRNLVKLLMKVSEICTQFALSILWAVFKLAPEECSVLAVEAGLAAKLLLVIQSGCNPELKQRSAELLKLCSLNYPDSIFISKCKLTRTIQ 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11180965 11183153 + XM_039028732.1 Bhi04g00447 32056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00447 449 Gene3D - 138 446 IPR011989 -
Bhi04g00447 449 ProSiteProfiles U-box domain profile. 64 138 IPR003613 GO:0004842|GO:0016567
Bhi04g00447 449 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 137 IPR013083 -
Bhi04g00447 449 PANTHER WDSAM1 PROTEIN 38 448 IPR045185 GO:0061630
Bhi04g00447 449 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 30 38 448 - -
Bhi04g00447 449 SMART Ubox_2 68 131 IPR003613 GO:0004842|GO:0016567
Bhi04g00447 449 CDD RING-Ubox_PUB 69 111 IPR045210 -
Bhi04g00447 449 Pfam U-box domain 65 135 IPR003613 GO:0004842|GO:0016567
Bhi04g00447 449 SUPERFAMILY RING/U-box 62 135 - -
Bhi04g00447 449 SUPERFAMILY ARM repeat 154 436 IPR016024 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi04g00447 Bhi09g03207 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00447 Bhi-Chr4:11180965 Bhi09g03207 Bhi-Chr9:82258321 0 dispersed
Bhi04g00447 Bhi-Chr4:11180965 Bhi09g03206 Bhi-Chr9:82258321 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00447 - - csv:101211594 833.172