Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00456 ACGTGGTCTTTCTCAAAATATACACAGATCCCTATGGAGTGCAGGGATGCTACCCAACATTTCCTCATTTCCCCTTCCTTCTTCATATTCCATTCTCTTTGTTTTCTTTGAAGTTTTAAACACACCATCTCCTTTGCTTCTTCTTCTCTATTCTTTACCCAACTCCACTCTTTCTTCTTCTTCTTCTTCTTCTTCATTCTTCTTTTAAATTTGTCATTTATAAAAAAGATATTGGAGAACAAATTTAATTAAAATGGTGGGTAGGAGAAAAAAAAAATTGTAAGTAGTTTGTATCATGAATAGTTAGTTGTTTTGTTTTGTCCCCAATGATTAATTTCGGTTCTTGCAGCTAGAAAAAGAAAGAAAATAGAACAAGAAGAGAAGATGAAGTCCATGAATGAGAATGATAATAGTAATAATAATAACAATAACAATAATAGTTGGTTGGGATTCTCTCTTTCTCCTCATATGAAAATGGAGGTTTCTTCTTCTGATCATCATCCTTACAATCAACACCATTCTCACTCTGCTTCAAATCCTTTCTACTTGTCTCCTCATTTCAACAACAGCAATACTGAAATCTTTTATGGAATTCCTGATAATTCCTCTCTCCACCATCACTCTGCTGCCGCTTCCCTCTCTGTAATGCCTCTCAAATCCGATGGCTCGCTCTGTATTATGGAAGCCCTTTCAAGATCCCAAACCGAAGGGATGGTACCGAGTTCTTCACCGAAGCTTGAGGATTTTCTTGGTGGTGCAACAATGGCGGGTCGAGGAGGCTATTTCAATCAAAATGCTGAATCTGAATCCGACAGGGAACATTCTTTGGACCTTCTCCACAGACCCATTAGACAAAATCAACAGATTTTAATTCAAAATTCCAATCAATACTATTCTGGGTTAGTTCCATCTTCCATTGGAATTGGAACTTGCGATCCCCATATTCTTCCCACTGAGAACGACGAAATCCCTTGCCTTAGAAACTGGGTTTCTCGTTCTCACTACTCCGCCACCCATAATACTCTGGAGCAGCACATTACTGGCGGTGCCGGCGGCGGCGCTCTTGTAAATGACGGTAGTGGCGGTGGCTCTGCTTCTATTGGAGGAATGAGCTGCGGGGAATTGCAGTCGTTGAGTTTGTCGATGAGTCCAGGTTCTCAATCAAGCTCATTTACGGCTTCCGGCCAGATCTCCCCTACTGGAGGCGACGGCGCCGCCGTGGAAACTAAAAAAAGAGGTCCCGGAAAACTCTGCCAGAAACAACCCGTTCACCGCAAGTCCATCGATACTTTTGGCCAAAGAACCTCCCAGTATCGTGGCGTCACCAGACATAGATGGACTGGGAGATATGAAGCTCATCTGTGGGATAATAGTTGCAAGAAAGAAGGGCAAACCAGAAAAGGAAGACAAGTGTATCTTGGGGGATATGATATGGAAGAAAAAGCTGCAAGAGCTTACGATCTTGCTGCCCTCAAGTACTGGGGACCCTCTACCCATATAAACTTTCCATTGGAAAATTATCAGACTGAACTTGAAGAAATGAAGAATATGAGCCGCCAAGAATATGTTGCTCACTTGAGAAGAAAAAGCAGTGGCTTTTCAAGGGGCGCTTCAGTTTTCCGTGGAGTCACAAGACATCACCAACATGGAAGATGGCAAGCAAGGATTGGGAGAGTTGCTGGAAACAAAGATCTCTATCTTGGGACATTTAGCACGCAAGAGGAAGCGGCTGAGGCTTATGACATTGCAGCAATCAAATTCCGCGGTGTAAATGCAGTCACCAACTTTGACATTTCCAGATATGATGTAGAGAGAATCATGGCTAGTAATACTCTACTGGCTGGCGAGCTTGCAAGAAGAAACAAGGATGTCGAACCGAGCAACGATACGACTGTCGTTCCTTATGACTCCTCGGTTGTGGCAAACAACAATGTGGGGATTGGGATTGGGATGGAAATCAATCCCGACGACAATGGCACAAATGGTAATGCTAATGATTGGAAGATGGCATTGTATCAGAGTCCATCCCATCAACAACAACAGAACTGTGTTGCTGAATCATTGGATCATCATCATAATAAGTCCATGACTGTACCGGGAGGTTATCGAAATGCTTCGTTTTCGATGGCATTGCAAGATTTAATTGGGATCGAGTCATTGAATGCTAATACTCATGGGATTGAAGATGGTGTGAGCAAACAAGTGACTCATTTTTCAAATTCGTCGTCGTTGGTGACGAGTTTGAGTAGCTCGAGAGAAGGTAGTCCCGACAAGATGAATATGTCAATGCCGTTTGGAAAGCCCCCACCCTTGATGGCGTCGAAGCTAATCGGTACAACGAGTGGGGTTGGGGTTGGGGTTGGTGCGTGGTATCCATCCCCACAGCAGCTGAGGCCAACAGCAGCCATTTCCATGGCACATTTGCCTGTTTTTGCAACTTGGAATGACACTTAAGAAAAACAAAACCCCTTTTCTTTCCCTTGATTACTTTTGGATTTAGTTTCTTTTAAATTTTGGTTTTGCATGAAGGTGAATGAAAAGAAAGAAAGCAAGAAAAATATGAATGATGATGTCTAGGAGGCAAGAAAAAAAAGAAAACAAGGAAAAAAAAAGAAAAGAAAAGAAGGGATGGGTTTTGAGAAGATAGAATTTTGATTACAATCCCTTTATTATTATTTCCTTTTTTTTTTTTCTTTCTAAGTTGTCAGTGGGAGAAAAATGGGGACTAAAAAATGGGAATAGTGGGGCCCAATTTCTGTGTCTGTAATCCATCTTTTTTCAAACCGAACCTTTTGGCTCCTCT 2803 41.99 MKSMNENDNSNNNNNNNNSWLGFSLSPHMKMEVSSSDHHPYNQHHSHSASNPFYLSPHFNNSNTEIFYGIPDNSSLHHHSAAASLSVMPLKSDGSLCIMEALSRSQTEGMVPSSSPKLEDFLGGATMAGRGGYFNQNAESESDREHSLDLLHRPIRQNQQILIQNSNQYYSGLVPSSIGIGTCDPHILPTENDEIPCLRNWVSRSHYSATHNTLEQHITGGAGGGALVNDGSGGGSASIGGMSCGELQSLSLSMSPGSQSSSFTASGQISPTGGDGAAVETKKRGPGKLCQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQTELEEMKNMSRQEYVAHLRRKSSGFSRGASVFRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDISRYDVERIMASNTLLAGELARRNKDVEPSNDTTVVPYDSSVVANNNVGIGIGMEINPDDNGTNGNANDWKMALYQSPSHQQQQNCVAESLDHHHNKSMTVPGGYRNASFSMALQDLIGIESLNANTHGIEDGVSKQVTHFSNSSSLVTSLSSSREGSPDKMNMSMPFGKPPPLMASKLIGTTSGVGVGVGAWYPSPQQLRPTAAISMAHLPVFATWNDT 689
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11617614 11621394 + XM_039028154.1 Bhi04g00456 32065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00456 689 SUPERFAMILY DNA-binding domain 308 377 IPR016177 GO:0003677
Bhi04g00456 689 PRINTS Ethylene responsive element binding protein signature 310 321 IPR001471 GO:0003700|GO:0006355
Bhi04g00456 689 PRINTS Ethylene responsive element binding protein signature 451 471 IPR001471 GO:0003700|GO:0006355
Bhi04g00456 689 MobiDBLite consensus disorder prediction 250 271 - -
Bhi04g00456 689 SMART rav1_2 411 475 IPR001471 GO:0003700|GO:0006355
Bhi04g00456 689 SMART rav1_2 309 381 IPR001471 GO:0003700|GO:0006355
Bhi04g00456 689 ProSiteProfiles AP2/ERF domain profile. 309 375 IPR001471 GO:0003700|GO:0006355
Bhi04g00456 689 Gene3D AP2/ERF domain 411 471 IPR036955 GO:0003700|GO:0006355
Bhi04g00456 689 Gene3D AP2/ERF domain 308 377 IPR036955 GO:0003700|GO:0006355
Bhi04g00456 689 CDD AP2 308 375 IPR001471 GO:0003700|GO:0006355
Bhi04g00456 689 ProSiteProfiles AP2/ERF domain profile. 411 469 IPR001471 GO:0003700|GO:0006355
Bhi04g00456 689 MobiDBLite consensus disorder prediction 1 21 - -
Bhi04g00456 689 Pfam AP2 domain 309 367 IPR001471 GO:0003700|GO:0006355
Bhi04g00456 689 Pfam AP2 domain 410 461 IPR001471 GO:0003700|GO:0006355
Bhi04g00456 689 MobiDBLite consensus disorder prediction 250 297 - -
Bhi04g00456 689 CDD AP2 410 471 IPR001471 GO:0003700|GO:0006355
Bhi04g00456 689 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 16 659 - -
Bhi04g00456 689 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 16 659 - -
Bhi04g00456 689 SUPERFAMILY DNA-binding domain 410 471 IPR016177 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi04g00456 Bhi09g03196 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01072 Bhi-Chr3:21682667 Bhi04g00456 Bhi-Chr4:11617614 0 dispersed
Bhi04g00456 Bhi-Chr4:11617614 Bhi09g03194 Bhi-Chr9:81862096 0 dispersed
Bhi03g01071 Bhi-Chr3:21679247 Bhi04g00456 Bhi-Chr4:11617614 0 wgd
Bhi04g00456 Bhi-Chr4:11617614 Bhi09g03193 Bhi-Chr9:81862096 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
872 PF00847 AP2 1.60E-13 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00456 K09285 - csv:101212797 1194.1