Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi04g00474 | CAATTCAGTACCTGTTTTGGCAACCAATTCTTCATCTCCTGCGGGCAATTTCGTAATTAGATCATCCTCTTCTTCAAATGGGAATCAGATGATCATGGCCGTAAATTCAAATCTCCCCTCCGGTTGGAGCTCCGCCAGAGGTGGCAGCGAAACTTAGTTCGGTACGGGAGGAATTCGAGCGGCGACGATCTTCAATGGCGTCCACTGAGAGTTCATCAATTGATCCTGATCTTGATCAATTTATGGAAGCTTATTATGGGATGTTAGTGAAGTATAGAGAGGAGCTAACAAGGCCAATTCAAGAAGCTGTAGATTTCATGCACAGAATTGAATCTCAGCTTAATACTCTCTGCAATGGCTCCTTTCAAATCTTAGCATCTGAAGGGAAATGTGAAGGAATGGGATCGTCGTCGTCGGAGGAAGAGAAAGGCGGGGAAGGGGAAAGAGAGATAGAAGATCAAATCGACCCACGAGCGGAAGAACGAGAGCTTAAGAATCACTTACTCAAAAAATACAGTGGTTATCTTAGCAGTTTAAAGCAAGAACTTTCCAAGAAAAAGAAGAAAGGCAAACTCCCAAAAGACGCAAGACAAGAGCTGCTTCGTTGGTGGGAATTGCACAACAAATGGCCTTACCCATCGGAGGCAGAAAAGTTGGCGCTGGCGGAATCAACTGGGCTTGACCAGAAACAGATAAATAATTGGTTCATAAACCAAAGGAAAAGGCACTGGAAGCCTTCTGAGGATGTGCAGTTTATGGGTATGGAGGGGTTTTACCATCCCAATGCCGCTGCTGCTTTTTACTTTGATGGCCATTTCATGACTGATTCCCATAATTATCGTTTGGGTCCATGAGTGGGAAGCTACAGTAATATATATATATATATATATATATATATATAATGCGCTTCTAAAACACACCTCTTGTTTTAGTTGTTAGCCTATATTTGTATGGATATACTTTTTGTTTAGTCCCTAATTAATTCCCTATTGCTTAAAAATGGAGGGGGGCGGGGTGGAGGAGTAATAGTTCATGGTAGAGTATTTGTAATTTTATTGTGCTTAAAGTCATAATTTCCTGCCCTCTCATTTGGTGAATATTCCTAAATGCAAGTCAAATAATAGTATCCAATTCCTTTCCTCA | 1143 | 41.38 | MASTESSSIDPDLDQFMEAYYGMLVKYREELTRPIQEAVDFMHRIESQLNTLCNGSFQILASEGKCEGMGSSSSEEEKGGEGEREIEDQIDPRAEERELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQELLRWWELHNKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQFMGMEGFYHPNAAAAFYFDGHFMTDSHNYRLGP | 219 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 12094223 | 12100262 | - | XM_039028644.1 | Bhi04g00474 | 32083 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi04g00474 | 219 | PANTHER | HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 | 7 | 210 | - | - | |
Bhi04g00474 | 219 | ProSiteProfiles | ELK domain profile. | 98 | 118 | IPR005539 | GO:0003677 | |
Bhi04g00474 | 219 | ProSitePatterns | 'Homeobox' domain signature. | 156 | 179 | IPR017970 | GO:0000981|GO:0006355 | |
Bhi04g00474 | 219 | CDD | homeodomain | 130 | 182 | IPR001356 | GO:0003677 | |
Bhi04g00474 | 219 | Gene3D | - | 115 | 188 | - | - | |
Bhi04g00474 | 219 | Pfam | Homeobox KN domain | 138 | 177 | IPR008422 | GO:0003677|GO:0006355 | |
Bhi04g00474 | 219 | ProSiteProfiles | 'Homeobox' domain profile. | 118 | 181 | IPR001356 | GO:0003677 | |
Bhi04g00474 | 219 | SMART | KNOX2_2 | 3 | 54 | IPR005541 | GO:0003677|GO:0005634 | |
Bhi04g00474 | 219 | Pfam | KNOX2 domain | 9 | 53 | IPR005541 | GO:0003677|GO:0005634 | |
Bhi04g00474 | 219 | Pfam | ELK domain | 98 | 119 | IPR005539 | GO:0003677 | |
Bhi04g00474 | 219 | SMART | ELK_2 | 98 | 119 | IPR005539 | GO:0003677 | |
Bhi04g00474 | 219 | MobiDBLite | consensus disorder prediction | 70 | 94 | - | - | |
Bhi04g00474 | 219 | SMART | HOX_1 | 120 | 185 | IPR001356 | GO:0003677 | |
Bhi04g00474 | 219 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 7 | 210 | - | - | |
Bhi04g00474 | 219 | MobiDBLite | consensus disorder prediction | 64 | 94 | - | - | |
Bhi04g00474 | 219 | SUPERFAMILY | Homeodomain-like | 119 | 191 | IPR009057 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bhi04g00474 | Bhi09g03182 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi04g00474 | Bhi-Chr4:12094223 | Bhi07g01752 | Bhi-Chr7:48154438 | 2.09E-66 | dispersed | |
Bhi04g00474 | Bhi-Chr4:12094223 | Bhi04g00475 | Bhi-Chr4:12094223 | 1.19E-165 | tandem | |
Bhi04g00474 | Bhi-Chr4:12094223 | Bhi09g03182 | Bhi-Chr9:81520335 | 2.11E-107 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
879 | PF03791 | KNOX2 | 2.90E-23 | No_clan | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi04g00474 | - | - | csv:101219997 | 350.132 |