Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00498 GAGTCGATCTCTTCTGGTGGAAAGGAGTATTTTGTGAAAACCTGTTATGGTGTTGTTTCTGTCACTGTGGTTGGAGACCAGGACAAACCAGCTCTAATCACTTATCCTGATTTAGCTCTAAATCGTGAATATGTTCTGCTTCCAAGGATTAATGTTTTGTCCAGAAGCTTGTTCGTTATTGCTTCACAACTTTTGCATATATCATATCAGCCCTCCTGGACATGAGTTAGGAGCTGCTGCAATTTGCCCTGATGATCCTGTACTTTCTGCAGATGACTTAGCAGATCAAATTGCTGAAGTTCTTAACTATTTTGGACTTAGTGCCGTGATGTGTATGGGTGTTACTGCTGGGGCATACATCCTCACTCTCTTTGCCATGAAGCACAGGCATCGTGTTCATGGTTTGATATTGATTTCTCCCATATGCACAGCGCCCTGTTGGACAGAATGGTTGTATAATAAGGTGATGTCAAATTTTCTTTATTTCTATGGCATGTGTGGGGTAGTGAAGGAGTTGTTGCTAAAGCGGTATTTCAGTAAGGAAGCTCGTGGTTGTTCTCAAGTACCAGAGTCCGATTTAGTTCAAGCATGCAGAAGATCGCTTGATGAGAGGCAAAGTTTAAACGTATGGAGGTTTCTTGAAGCGATGAATGGGAGACCTGACATATCAGAAGGGTTGCGAAAACTAAAGTGCCGTTCGTTGATATTTGTTGGGGACAGGTCCCCATTCCACTCAGAGGCTCACCACATGGCTGTTAAACTAGATAGAAGATACAGTGCCCTAGTGGAAGTTCAATCATGTGGGTCAATGGTGACGGAGGAGCAGCCTGATGCAATGTTGATACCTATGGAGTATTTTCTCATGGGATATGGTATGTATAGGCCATCTCATTTTAGCGTCAGCCCAAGAAGCCCTTTGAGCCCTTCTTGCATAGCTCCTGAGCTTCTATCGCCAGAAAGCATGGGCTTGAAGTTGAAACCAATAAAAACAAGAATCTCCTTGCAAGTCTAGACGATGGACGATGAAAGGAGGCAGAAGAACAGAAAATAAAGATCACTTTTTGTATTTATGTGTACGTGAGGACAGTTTTTTGGTTTTTCTCTGGCAATCCATCAGTTCATGAGTAAGAGGTGTGGGCTTGGGGTGTAGATAAAGAAGGAAACAGGATAATTGGTAATGAAAACTTTTAGGCAGAAATCAGAATTTGTCATTCTTTCATTTGTAATCAAAAGAGTTAGTTGAGGAGGGCCATTCTCTGTAAATCCAAGAATTATTTATTTCCAATAAATAAATAATGTTTTTA 1304 41.33 MFCFQGLMFCPEACSLLLHNFCIYHISPPGHELGAAAICPDDPVLSADDLADQIAEVLNYFGLSAVMCMGVTAGAYILTLFAMKHRHRVHGLILISPICTAPCWTEWLYNKVMSNFLYFYGMCGVVKELLLKRYFSKEARGCSQVPESDLVQACRRSLDERQSLNVWRFLEAMNGRPDISEGLRKLKCRSLIFVGDRSPFHSEAHHMAVKLDRRYSALVEVQSCGSMVTEEQPDAMLIPMEYFLMGYGMYRPSHFSVSPRSPLSPSCIAPELLSPESMGLKLKPIKTRISLQV 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12566308 12569993 + XM_039028864.1 Bhi04g00498 32107

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00498 293 PANTHER PROTEIN NDL2 1 293 - -
Bhi04g00498 293 SUPERFAMILY alpha/beta-Hydrolases 14 244 IPR029058 -
Bhi04g00498 293 Gene3D alpha/beta hydrolase 1 246 IPR029058 -
Bhi04g00498 293 Pfam Ndr family 2 251 IPR004142 -
Bhi04g00498 293 PANTHER N-MYC DOWNSTREAM REGULATED 1 293 IPR004142 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00498 - - - csv:101217037 599.356
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00497 Bhi-Chr4:12566054 Bhi04g00498 Bhi-Chr4:12566308 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g66 Blo01g01473 . Bda01g00613 . . Bpe02g00482 . Bma01g02219 Cmo05g00108 Cmo12g00573 . Cma05g00101 . Car12g00581 Sed08g1762 Cpe07g00554 . Bhi04g00498 Tan02g1646 . . Hepe08g1384 . Lcy13g2178 . . . . . . . Cone4ag1654 Cone7ag1297 Cone17ag0920 Cone20ag0263 . . . . . . . . . . . . . . . . Cma12g00632 . Car05g00087 Cpe11g00081 . . . . . . . . . . . . . . . Lsi08g01576 Csa02g01844 Chy03g01639 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000907 5 5 3 4 3 2 4 2 2 1 2 2 3 2 2 4 2 7 4 2 2 2 2 2 2 2 2 4 5 3 87
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi04g00498 Bhi_Chr04 FPKM 6.766503 9.053531 16.542376 17.012726 9.550075 8.626715 9.242891 17.59267 18.967997 18.68745