Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00500 TTTTGAATAAAAAAAAACCTAAAGATGAGAAGAAAATGAGAAGCCCAAGAAGAAAAGAGAGAACCCCCATATTGCTTTGTATGATTTGTCTCTGCGTCTTTTCAACTGAGCACACACTGACTCTGAGTCATGGGGAGGTCCGGATATTGGCGACCCACCATGGGACCTCTCTCTGAATCCCTCTGTGAACCTCTCATAACCCTTTCTGCCCTTCTTCAATTTCACCAAATGGATTCGATTTTTGGCTCAATTTTGTTTTCTTTAATCATGGGTCGAAATTTTCTACTTAAAGAGAGAGAATTGGGGGGTGGTGTTGGGGTGTTTTGACCAACCCAAAACCCTTGAAACCCCTTTTTCTTCGTCATAATTGTTTGTTTCTTCGAATCGATTCCAATTTCTGGGTTATGAAATACACAAAAAGCAAACCCAAGTAGAGAAGAAAAAGTGTGGATTGGCAGCATTTCTCTGTTTGGGTTTGCAGGTAACCAAGCGAGGAACAGACCCCACGTCCCCAAATGTTCACACTCAACCATGTGGTAATGGATGGCTAAAAAGAAAGTGACTTCGTCTGAAAAATGGTGCTGAGAAGACCTGGCAGGAACAGGAGTTTCAACAGAGAGAATCCAGATATTTTGATTATGATGATTGCAGTGGATCAGATAATAAGAGGTTATGAGCAGGACAAAGGAGATGGCACAGAGAGGAAGGGCATGGGCCCTTTAAAGCCTGCAACAAAGAGTAAGTGGTTTCTGCACCCAAGAGCAATGCTTTCTCTCTCTCTCCACCCCCCGGTTTTCTCTTATGTGACTGTTACTTCCTTCTATCTTTATTTAGTGGGTTCATTTCCTCCATCTTCACCTTCATGCAGAGTCCTCTTTTTTGCCTCTTGACTCTCTCTTTCTTCCTTTTAATGGTTCTCTGAGATGGATGTCATTCATTTTCCAGAGCTGTACCTATTTTAGCTTTAAAGTTTGAGACCGGAGATTGAGATTATACACCTCCCTGGTGTTCAATGCTCCAAACTTAAGCTTCTCGGGGTTTGGGCACTTGAAGCTATTCCATTCTCCTTTTTTCATGCAAAATTTTGTATCACTTTTCTTTTACCATCAGCTTTATGTTGTGATTTGGCAGAAGCCGGAAAAGTGGGAATACAGCACCAGTCATTATTGCTTCTTTTCCGCTTGTTTTTTTTTCTATAAAAGCAAAGCTTCTCGTCCACTTTATCTGAATTTTCACAATGTTACCCTTTTCTGGAGAAACAAGAAACCAAGTTCTTTGAATCTTCTCCTTTTGCTTTGTTAGGTTGTCTTTGATCTCCTGTGAGTGAAGAACCATAAAGCATGTGAACAGTATAACAACTTTTTTTGCGTTTTATACGTTGCAAGTTTGAAGTTCTTCACTAAGCCATCACATCCATTTATTTGCCTAATTCAGGACCACGGTGTTCCTTTCAGAAGATTTGTTGTGGGGCTTTCACTCTAAGTTTCTCATCCTATTTTAGGATGATAAATATTTATCAAATGGAAGCCAAAACGATATAGTAGTTCGAGTATGTTAACTTGTGCTGTTGCTTGGATTGTTGGAGAGTGACTTGATGAATGCTCTGGTGGATTGGATATGGCAAGCCCAAATTCTGTTGTAGGTTCTCCAATGTCTACTGCCCTGCAACGAATCGATTTGGGGGATGCTTGTTTGAGTCCATCTGGTAATGTCGAGTTTCAAAATCAGTTGGCAGGAGAAATTCCTGTTACTTCTCTCTTTCAATCCACCTTTCTTGCTCCAGTAAATGATATTCGTGAAAATGCAAAAGATTCAGCATTTCCAGACCCTCAGTTTCAGCAATTAGAAACCTTTAGAACGTGCATCTTACACAGTTCCTCTAATGCTTCTAATTCTTCATTTGCAAGTTCTCTGATATGTGAAGGTGATGAGTCTCTTTGTAATGCAAATAACAAGTGGGAAAGTGATAGGTTTCATTGTATTCAGCAACTTTCTAGGGAGAATCCAGAAAGATCAGATTTCCAGACCATCTCGTCAATGGAACACCTGCATCAGAATGGCTGGATGCCATCTAACACTATGAACTCCAAGTTATGGAATGAGCTTTCTCTAAGCCTTGCCACATCCGAACCTGTCCTCAGTGGAGGAACCAATTTCCTGGACCAGTATCCACAGTTGACCTTTTCTGATTCTAATCAGCCTTGTTTGAACAGCACGGAATTAGCCTCGAACCTGAATTCAGGCAGCTCCAGGGACCTCCCTCTTAGTTATGGATGTGGTAGTCCTGTTCACCTTTCTCGTGCAATAGCAGGATCAAGATATCTTTCTGTCATTCAGGACGTACTCTCCCAAATTGCAAGATATCCACTGGAAAGTTCGGAGCAAGCTTGTCATTCAACTACTACTGTGGGGTTTGTGCCATCCCTGGATGATGCTACAATTGAATATGGTTCTGATGTAACTGTTAGATACAATTCTCAAATGGAGCCTGAATGTCAAAAACCATCGGTTGATGCCAAGAAATCCCATCTGTTGACTCTACTACAATTGATTGATGAGAGGTACACTCAATGCCTAGACGAAATTCATACCGTTACATCTGCGTTTCATGCCGCCACTGATTTGGACCCTTGCTTGCATACTCACTATACTCTCCAGACAATCACTTCAGTGTATAAAAATCTGAGGGAGAAAATTACCAATTGTATTTTTGCTATGGGTATGCATTCTAACACAATGTGCACCAAGGAGAAGGAAAAATCCTTTGAGGCAACATTCATCCAGAAGCAGTGGGCTCTACAGCAATTGAAAAGGAAAGATAATCAATTATGGAGGCCACAGAGAGGCTTGCCTGAGAAATCTGTCTCCGTTCTAAGGGCATGGATGTTTCAAAACTTTCTCCATCCGTATCCCAAGGACACAGAGAAGCATTTACTTGCAGTAAAAAGTGGATTAACTAGAAATCAGGTGTCTAATTGGTTCATCAATGCTCGTGTCCGGTTGTGGAAACCGATGATTGAAGAAATGTATGCTGAAATGAGCAGAAGAAAATCCAGTCAAAACGAGGAAGGAATCGAAAGAATTCATCGACCCAGATAAGCAATAGCAGCAAGAAGATGGTAGCTTGAACTGTGAATGTGATAAGCGGGATTGAGCATTGTATGGGGGACTTGAATAGATTAGAAAAGTGTATTGGACCGAATTCCAACTACATATTCTTTTTGGTAATCGAATTGAAACAATTAAACCTGAA 3253 40.92 MASPNSVVGSPMSTALQRIDLGDACLSPSGNVEFQNQLAGEIPVTSLFQSTFLAPVNDIRENAKDSAFPDPQFQQLETFRTCILHSSSNASNSSFASSLICEGDESLCNANNKWESDRFHCIQQLSRENPERSDFQTISSMEHLHQNGWMPSNTMNSKLWNELSLSLATSEPVLSGGTNFLDQYPQLTFSDSNQPCLNSTELASNLNSGSSRDLPLSYGCGSPVHLSRAIAGSRYLSVIQDVLSQIARYPLESSEQACHSTTTVGFVPSLDDATIEYGSDVTVRYNSQMEPECQKPSVDAKKSHLLTLLQLIDERYTQCLDEIHTVTSAFHAATDLDPCLHTHYTLQTITSVYKNLREKITNCIFAMGMHSNTMCTKEKEKSFEATFIQKQWALQQLKRKDNQLWRPQRGLPEKSVSVLRAWMFQNFLHPYPKDTEKHLLAVKSGLTRNQVSNWFINARVRLWKPMIEEMYAEMSRRKSSQNEEGIERIHRPR 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12570126 12575506 - XM_039028860.1 Bhi04g00500 32109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00500 493 Pfam Associated with HOX 230 361 IPR006563 -
Bhi04g00500 493 ProSiteProfiles 'Homeobox' domain profile. 402 465 IPR001356 GO:0003677
Bhi04g00500 493 SMART HOX_1 405 469 IPR001356 GO:0003677
Bhi04g00500 493 CDD homeodomain 405 466 IPR001356 GO:0003677
Bhi04g00500 493 Gene3D - 398 480 - -
Bhi04g00500 493 SUPERFAMILY Homeodomain-like 406 474 IPR009057 -
Bhi04g00500 493 MobiDBLite consensus disorder prediction 474 493 - -
Bhi04g00500 493 Pfam Homeobox KN domain 422 461 IPR008422 GO:0003677|GO:0006355
Bhi04g00500 493 PANTHER HOMEOBOX PROTEIN ATH1 21 491 - -
Bhi04g00500 493 SMART prehox3 224 362 IPR006563 -
Bhi04g00500 493 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 21 491 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00500 Bhi-Chr4:12570126 Bhi04g00502 Bhi-Chr4:12570126 0 dispersed
Bhi04g00499 Bhi-Chr4:12570126 Bhi04g00500 Bhi-Chr4:12570126 0 tandem
Bhi04g00500 Bhi-Chr4:12570126 Bhi04g00501 Bhi-Chr4:12570126 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
884 PF07526 POX 5.40E-21 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00500 - - csv:101204223 854.358