Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00527 TCCTAGAACCTTCTACTCCGACGCCATTAAAATTCAGTTTCTTCCCTCCTTTTATCATTCAATCAAACTCTAAAATCTCTTTCCTTCTTTAATTAATCACGCTCATTAACTTCCCAATCCCGGATTAACTACTTCCGATCAAACCAGCAATGGATGAACTGAAAGTGAAACCAGAGGAGTCAGCAGTGGCCACCGGCACGGCGGCGTCTTCTTCTTCTTCTTCTTCTTTTTCTTCCTCGTCTTCATCCGTCACTCCTCAGCCGATCGAAGGGCTACACGATGTTGGTCCGCCTCCATTTCTGACGAAGACCTTTGAAATGGTGGAAGATCCATTGACGGACTCCATTGTTTCCTGGAGTAAAGCTCGTAATAGTTTCATCGTTTGGGATTATCACAAATTCTCTACTACTTTGCTGCCTCGTTACTTCAAGCACTCCAATTTCTCTAGTTTCATTCGTCAACTCAATACTTATGGTTTTCGTAAAGTCGATCCTGATCGTTGGGAGTTTGCGAATGAGGGGTTTCTGGGAGGACAGCGACATCTGTTAAGAACCATAAAGAGGAGGAGACATTCACATCAAAACATCCAGCACCAAGGAGGAACATGTGTGGAATTAGGGCAATTTGGACTGGAAGCCGACCTTGAGAGGTTGAGAAGGGACAGAAGCTCGTTAATGGCGGAATTAGTGAGATTGAGGCAGCAACACCAGAGCTCAAGAGAGCAAATAATGGCCATGGAGGATAGGTTAGAGAAAGCAGAGAGTAAACAGAAGCAGATCATGACATTCCTCAGCAAAGCCCTCAAGAACCCTTCCTTCATTCAGAAATTTATTCATAGTAATCAGGGAAAAGAATTGAGATGCGTTGAAATTGGACGAAAGCGAAGACTAACTGCCAGCCCAAGTGTAGAGAATCTCCAGGATGAGAATGTATCAGTAGCTGTTAAACAAGAAGAGCTAGAAACTTCTGAACCAGATATAGAGACGCTGTTAACAGTTAACTTTGAAGACGAGTCAAGCATTGAGATTACGGACCCTGTTTCTGATATGGGTCACTCTGCTCATGAGGAATTGGGGGTTTTCGGTCAACTTTGGGCTGAAGATCTTATAGCTGGACATCCAGAAGAAGCCATAACTGTTGGTAATCAATCAGATGTTGATGTGGAAGTGGAGGATCTGATTGCTGAACCCCTGGATTGGACTGAGGACTTGCAGGAACTCGTCGATCAAATGGGGTTCCTCCGGTCGAAGCCATAAACATAACGGTGTAGTCAATATGTTTGGCATTTTGCTTCTGTTCATGTGGAATAGGTTTCAGCTGGCTCGTGTAGGAAGCAATGGTGGATATTGCAGGGGAGCCACAGATTGTTCCTGTTTCCTTATATCCTTTGAAACTCATTGGTTTTTCAATATTATGTACTTCAATATTTTTGGTTATGATAAATTTGTTGTGGTTATTTTTTTCATCCGTGGTTTTATTTGCAGGCATGTGCAGAGAAAGGAAACCTGCGTGAAGATTCAGTCATTTGCTGATTTCATTATCATTAAGTCAAGAGTAATCATCCCATTCACTAATTGAGAACCATTAACTGCTATTCATTTGAAGTGTACGAGTCTGCTGTAAACTAGATCCAAATTTTTTCCCTCAAGTATAGTGAGGTGTTCGCTATTTTATGTGGAAGATACCAAAAGGCAGCTATTTTCCTTTGTCATAGCTTAGGAAATATAGTTCTGATAAAATATTTTAGATCTTGAAGGGCTTTTGGTCCTTGATTCATTATTCGTGTTTGAGCTTAATAATGTTAAGCTCTGTTATGTAAGATGGAATAAACAAGTTTGAAGTTCTAGGCTTTATTAACTTACGGGCAA 1868 41.33 MDELKVKPEESAVATGTAASSSSSSSFSSSSSSVTPQPIEGLHDVGPPPFLTKTFEMVEDPLTDSIVSWSKARNSFIVWDYHKFSTTLLPRYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQRHLLRTIKRRRHSHQNIQHQGGTCVELGQFGLEADLERLRRDRSSLMAELVRLRQQHQSSREQIMAMEDRLEKAESKQKQIMTFLSKALKNPSFIQKFIHSNQGKELRCVEIGRKRRLTASPSVENLQDENVSVAVKQEELETSEPDIETLLTVNFEDESSIEITDPVSDMGHSAHEELGVFGQLWAEDLIAGHPEEAITVGNQSDVDVEVEDLIAEPLDWTEDLQELVDQMGFLRSKP 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 13020279 13022265 + XM_039029442.1 Bhi04g00527 32136

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00527 368 SUPERFAMILY Winged helix DNA-binding domain 46 139 IPR036390 -
Bhi04g00527 368 SMART hsfneu3 46 139 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bhi04g00527 368 ProSitePatterns HSF-type DNA-binding domain signature. 89 113 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bhi04g00527 368 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 21 326 - -
Bhi04g00527 368 MobiDBLite consensus disorder prediction 14 38 - -
Bhi04g00527 368 PRINTS Heat shock factor (HSF) domain signature 50 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bhi04g00527 368 PRINTS Heat shock factor (HSF) domain signature 88 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bhi04g00527 368 PRINTS Heat shock factor (HSF) domain signature 101 113 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bhi04g00527 368 Gene3D - 43 140 IPR036388 -
Bhi04g00527 368 Pfam HSF-type DNA-binding 50 139 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bhi04g00527 368 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 21 326 IPR027725 -
Bhi04g00527 368 Coils Coil 165 206 - -
Bhi04g00527 368 MobiDBLite consensus disorder prediction 1 45 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00527 K09419 HSFF; heat shock transcription factor, other eukaryote - csv:101219171 638.262
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00527 Bhi-Chr4:13020279 Bhi09g01104 Bhi-Chr9:25569081 1.74E-90 dispersed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi01g00760 . 6 238 HSF AT4G17750 54.1 3.6e-62 236.9
Bhi04g00527 . 47 247 HSF AT4G17750 54.6 3.7e-59 226.9
Bhi05g00305 . 41 243 HSF AT4G17750 55.3 3.7e-59 226.9
Bhi05g00304 . 41 243 HSF AT4G17750 55.3 3.7e-59 226.9
Bhi09g01104 . 61 304 HSF AT4G17750 50.2 1.9e-58 224.6
Bhi06g01635 . 66 259 HSF AT4G17750 51.0 5.1e-48 189.9
Bhi06g01634 . 66 259 HSF AT4G17750 51.0 5.1e-48 189.9
Bhi08g02149 . 13 191 HSF AT4G17750 50.8 8.9e-45 179.1
Bhi08g02150 . 13 191 HSF AT4G17750 50.8 8.9e-45 179.1
Bhi04g00361 CCT 20 118 HSF AT4G17750 71.7 9.6e-39 159.1
Bhi09g03307 CCT 20 118 HSF AT4G17750 69.7 3.6e-38 157.1
Bhi12g00210 CCT 20 115 HSF AT4G17750 70.8 1.2e-36 152.1
Bhi12g00211 . 20 115 HSF AT4G17750 70.8 1.2e-36 152.1
Bhi05g00305 . 42 263 HSF AT5G16820 52.0 1.2e-59 228.4
Bhi05g00304 . 42 263 HSF AT5G16820 52.0 1.2e-59 228.4
Bhi01g00760 . 40 243 HSF AT5G16820 56.8 2.1e-59 227.6
Bhi09g01104 . 62 276 HSF AT5G16820 54.6 8.4e-56 215.7
Bhi04g00527 . 48 258 HSF AT5G16820 51.1 1.1e-55 215.3
Bhi06g01635 . 68 259 HSF AT5G16820 52.6 4.2e-47 186.8
Bhi06g01634 . 68 259 HSF AT5G16820 52.6 4.2e-47 186.8
Bhi02g01124 CCT 10 176 HSF AT5G16820 51.1 9.0e-42 169.1
Bhi11g00015 . 13 515 HSF AT1G32330 53.2 2.0e-121 433.7
Bhi01g00760 . 10 228 HSF AT1G32330 50.9 8.1e-59 225.7
Bhi05g00305 . 20 227 HSF AT1G32330 53.2 1.4e-58 224.9
Bhi05g00304 . 20 227 HSF AT1G32330 53.2 1.4e-58 224.9
Bhi09g01104 . 50 272 HSF AT1G32330 51.8 9.0e-58 222.2
Bhi04g00527 . 36 228 HSF AT1G32330 54.6 2.2e-56 217.6
Bhi04g00361 CCT 20 117 HSF AT1G32330 71.4 6.0e-38 156.4
Bhi09g03307 CCT 22 117 HSF AT1G32330 71.9 1.8e-37 154.8
Bhi05g00305 . 42 263 HSF AT3G02990 51.7 3.8e-61 233.4
Bhi05g00304 . 42 263 HSF AT3G02990 51.7 3.8e-61 233.4
Bhi01g00760 . 40 242 HSF AT3G02990 56.0 2.1e-59 227.6
Bhi09g01104 . 62 287 HSF AT3G02990 52.6 3.9e-58 223.4
Bhi04g00527 . 48 247 HSF AT3G02990 51.7 4.8e-56 216.5
Bhi02g01124 CCT 10 172 HSF AT3G02990 50.3 1.3e-40 165.2
Bhi04g00527 . 36 368 HSF AT2G26150 50.3 1.3e-87 320.9
Bhi01g00760 . 7 238 HSF AT2G26150 55.0 5.8e-67 252.3
Bhi09g01104 . 50 271 HSF AT2G26150 54.7 7.1e-65 245.4
Bhi11g00015 . 8 243 HSF AT2G26150 55.7 4.7e-61 232.6
Bhi06g01635 . 56 278 HSF AT2G26150 52.0 5.1e-55 212.6
Bhi06g01634 . 56 278 HSF AT2G26150 52.0 5.1e-55 212.6
Bhi11g01977 . 116 359 HSF AT5G03720 59.3 9.0e-75 278.5
Bhi10g01040 . 2 188 HSF AT4G18880 50.5 1.4e-48 191.4
Bhi01g00185 . 3 462 HSF AT4G13980 51.8 2.5e-113 406.8
Bhi01g00760 . 27 219 HSF AT5G43840 53.9 9.3e-55 211.5
Bhi04g00527 . 36 225 HSF AT5G43840 52.6 1.2e-46 184.5
Bhi01g00760 . 22 324 HSF AT3G22830 52.6 1.4e-88 324.3
Bhi05g00305 . 27 349 HSF AT3G22830 51.8 1.2e-87 321.2
Bhi05g00304 . 27 349 HSF AT3G22830 51.8 1.2e-87 321.2
Bhi04g00527 . 36 228 HSF AT3G22830 59.1 6.4e-65 245.7
Bhi11g00015 . 29 242 HSF AT3G22830 58.9 1.3e-62 238.0
Bhi05g00305 . 29 322 HSF AT3G51910 54.1 1.1e-71 267.7
Bhi05g00304 . 29 322 HSF AT3G51910 54.1 1.1e-71 267.7
Bhi01g00760 . 27 239 HSF AT3G51910 57.0 1.2e-59 227.6
Bhi04g00527 . 36 228 HSF AT3G51910 56.5 6.8e-55 211.8
Bhi05g00305 . 29 333 HSF AT3G63350 50.2 1.3e-69 260.8
Bhi05g00304 . 29 333 HSF AT3G63350 50.2 1.3e-69 260.8
Bhi01g00760 . 12 228 HSF AT3G63350 52.2 3.2e-55 213.0
Bhi04g00527 . 36 235 HSF AT3G63350 51.0 9.0e-50 194.9
Bhi10g01040 . 5 139 HSF AT3G63350 57.9 3.9e-37 152.9
Bhi03g01845 CCT 2 296 HSF AT4G36990 52.0 5.8e-73 271.9
Bhi12g00210 CCT 12 300 HSF AT5G62020 50.7 1.5e-58 224.2
Bhi12g00211 . 12 300 HSF AT5G62020 50.7 1.5e-58 224.2
Bhi12g00210 CCT 16 336 HSF AT4G11660 56.8 1.0e-80 298.1
Bhi12g00211 . 16 336 HSF AT4G11660 56.8 1.0e-80 298.1
Bhi09g03307 CCT 16 119 HSF AT4G11660 74.0 2.0e-44 177.6
Bhi04g00361 CCT 16 121 HSF AT4G11660 71.7 2.6e-44 177.2
Bhi03g01845 CCT 2 107 HSF AT4G11660 72.6 8.3e-43 172.2
Bhi11g00015 . 33 126 HSF AT4G11660 69.1 2.6e-36 150.6
Bhi11g02893 CCT 20 118 HSF AT4G11660 67.7 3.4e-36 150.2
Bhi03g02582 CCT 9 209 HSF AT2G41690 54.3 4.6e-50 195.7
Bhi11g02893 CCT 25 225 HSF AT2G41690 51.7 1.9e-48 190.3
Bhi04g00361 CCT 19 376 HSF AT1G46264 51.8 2.5e-86 316.6
Bhi09g03307 CCT 1 352 HSF AT1G46264 51.7 3.1e-84 309.7
Bhi03g01845 CCT 4 198 HSF AT1G46264 50.7 9.4e-49 191.8
Bhi11g00015 . 33 138 HSF AT1G46264 73.6 5.5e-41 166.0
Bhi10g01040 . 5 114 HSF AT1G46264 65.5 7.4e-38 155.6
Bhi01g00760 . 30 142 HSF AT1G46264 61.1 1.7e-37 154.5
Bhi05g00305 . 33 147 HSF AT1G46264 60.0 6.3e-37 152.5
Bhi05g00304 . 33 147 HSF AT1G46264 60.0 6.3e-37 152.5
Bhi01g00760 . 6 238 HSF AT4G17750 54.1 3.6e-62 236.9
Bhi04g00527 . 47 247 HSF AT4G17750 54.6 3.7e-59 226.9
Bhi05g00305 . 41 243 HSF AT4G17750 55.3 3.7e-59 226.9
Bhi05g00304 . 41 243 HSF AT4G17750 55.3 3.7e-59 226.9
Bhi09g01104 . 61 304 HSF AT4G17750 50.2 1.9e-58 224.6
Bhi06g01635 . 66 259 HSF AT4G17750 51.0 5.1e-48 189.9
Bhi06g01634 . 66 259 HSF AT4G17750 51.0 5.1e-48 189.9
Bhi08g02149 . 13 191 HSF AT4G17750 50.8 8.9e-45 179.1
Bhi08g02150 . 13 191 HSF AT4G17750 50.8 8.9e-45 179.1
Bhi04g00361 CCT 20 118 HSF AT4G17750 71.7 9.6e-39 159.1
Bhi09g03307 CCT 20 118 HSF AT4G17750 69.7 3.6e-38 157.1
Bhi12g00210 CCT 20 115 HSF AT4G17750 70.8 1.2e-36 152.1
Bhi12g00211 . 20 115 HSF AT4G17750 70.8 1.2e-36 152.1
Bhi05g00305 . 42 263 HSF AT5G16820 52.0 1.2e-59 228.4
Bhi05g00304 . 42 263 HSF AT5G16820 52.0 1.2e-59 228.4
Bhi01g00760 . 40 243 HSF AT5G16820 56.8 2.1e-59 227.6
Bhi09g01104 . 62 276 HSF AT5G16820 54.6 8.4e-56 215.7
Bhi04g00527 . 48 258 HSF AT5G16820 51.1 1.1e-55 215.3
Bhi06g01635 . 68 259 HSF AT5G16820 52.6 4.2e-47 186.8
Bhi06g01634 . 68 259 HSF AT5G16820 52.6 4.2e-47 186.8
Bhi02g01124 CCT 10 176 HSF AT5G16820 51.1 9.0e-42 169.1
Bhi11g00015 . 13 515 HSF AT1G32330 53.2 2.0e-121 433.7
Bhi01g00760 . 10 228 HSF AT1G32330 50.9 8.1e-59 225.7
Bhi05g00305 . 20 227 HSF AT1G32330 53.2 1.4e-58 224.9
Bhi05g00304 . 20 227 HSF AT1G32330 53.2 1.4e-58 224.9
Bhi09g01104 . 50 272 HSF AT1G32330 51.8 9.0e-58 222.2
Bhi04g00527 . 36 228 HSF AT1G32330 54.6 2.2e-56 217.6
Bhi04g00361 CCT 20 117 HSF AT1G32330 71.4 6.0e-38 156.4
Bhi09g03307 CCT 22 117 HSF AT1G32330 71.9 1.8e-37 154.8
Bhi05g00305 . 42 263 HSF AT3G02990 51.7 3.8e-61 233.4
Bhi05g00304 . 42 263 HSF AT3G02990 51.7 3.8e-61 233.4
Bhi01g00760 . 40 242 HSF AT3G02990 56.0 2.1e-59 227.6
Bhi09g01104 . 62 287 HSF AT3G02990 52.6 3.9e-58 223.4
Bhi04g00527 . 48 247 HSF AT3G02990 51.7 4.8e-56 216.5
Bhi02g01124 CCT 10 172 HSF AT3G02990 50.3 1.3e-40 165.2
Bhi04g00527 . 36 368 HSF AT2G26150 50.3 1.3e-87 320.9
Bhi01g00760 . 7 238 HSF AT2G26150 55.0 5.8e-67 252.3
Bhi09g01104 . 50 271 HSF AT2G26150 54.7 7.1e-65 245.4
Bhi11g00015 . 8 243 HSF AT2G26150 55.7 4.7e-61 232.6
Bhi06g01635 . 56 278 HSF AT2G26150 52.0 5.1e-55 212.6
Bhi06g01634 . 56 278 HSF AT2G26150 52.0 5.1e-55 212.6
Bhi11g01977 . 116 359 HSF AT5G03720 59.3 9.0e-75 278.5
Bhi10g01040 . 2 188 HSF AT4G18880 50.5 1.4e-48 191.4
Bhi01g00185 . 3 462 HSF AT4G13980 51.8 2.5e-113 406.8
Bhi01g00760 . 27 219 HSF AT5G43840 53.9 9.3e-55 211.5
Bhi04g00527 . 36 225 HSF AT5G43840 52.6 1.2e-46 184.5
Bhi01g00760 . 22 324 HSF AT3G22830 52.6 1.4e-88 324.3
Bhi05g00305 . 27 349 HSF AT3G22830 51.8 1.2e-87 321.2
Bhi05g00304 . 27 349 HSF AT3G22830 51.8 1.2e-87 321.2
Bhi04g00527 . 36 228 HSF AT3G22830 59.1 6.4e-65 245.7
Bhi11g00015 . 29 242 HSF AT3G22830 58.9 1.3e-62 238.0
Bhi05g00305 . 29 322 HSF AT3G51910 54.1 1.1e-71 267.7
Bhi05g00304 . 29 322 HSF AT3G51910 54.1 1.1e-71 267.7
Bhi01g00760 . 27 239 HSF AT3G51910 57.0 1.2e-59 227.6
Bhi04g00527 . 36 228 HSF AT3G51910 56.5 6.8e-55 211.8
Bhi05g00305 . 29 333 HSF AT3G63350 50.2 1.3e-69 260.8
Bhi05g00304 . 29 333 HSF AT3G63350 50.2 1.3e-69 260.8
Bhi01g00760 . 12 228 HSF AT3G63350 52.2 3.2e-55 213.0
Bhi04g00527 . 36 235 HSF AT3G63350 51.0 9.0e-50 194.9
Bhi10g01040 . 5 139 HSF AT3G63350 57.9 3.9e-37 152.9
Bhi03g01845 CCT 2 296 HSF AT4G36990 52.0 5.8e-73 271.9
Bhi12g00210 CCT 12 300 HSF AT5G62020 50.7 1.5e-58 224.2
Bhi12g00211 . 12 300 HSF AT5G62020 50.7 1.5e-58 224.2
Bhi12g00210 CCT 16 336 HSF AT4G11660 56.8 1.0e-80 298.1
Bhi12g00211 . 16 336 HSF AT4G11660 56.8 1.0e-80 298.1
Bhi09g03307 CCT 16 119 HSF AT4G11660 74.0 2.0e-44 177.6
Bhi04g00361 CCT 16 121 HSF AT4G11660 71.7 2.6e-44 177.2
Bhi03g01845 CCT 2 107 HSF AT4G11660 72.6 8.3e-43 172.2
Bhi11g00015 . 33 126 HSF AT4G11660 69.1 2.6e-36 150.6
Bhi11g02893 CCT 20 118 HSF AT4G11660 67.7 3.4e-36 150.2
Bhi03g02582 CCT 9 209 HSF AT2G41690 54.3 4.6e-50 195.7
Bhi11g02893 CCT 25 225 HSF AT2G41690 51.7 1.9e-48 190.3
Bhi04g00361 CCT 19 376 HSF AT1G46264 51.8 2.5e-86 316.6
Bhi09g03307 CCT 1 352 HSF AT1G46264 51.7 3.1e-84 309.7
Bhi03g01845 CCT 4 198 HSF AT1G46264 50.7 9.4e-49 191.8
Bhi11g00015 . 33 138 HSF AT1G46264 73.6 5.5e-41 166.0
Bhi10g01040 . 5 114 HSF AT1G46264 65.5 7.4e-38 155.6
Bhi01g00760 . 30 142 HSF AT1G46264 61.1 1.7e-37 154.5
Bhi05g00305 . 33 147 HSF AT1G46264 60.0 6.3e-37 152.5
Bhi05g00304 . 33 147 HSF AT1G46264 60.0 6.3e-37 152.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006629 1 1 2 2 1 1 2 1 1 1 1 1 2 1 1 2 2 2 2 1 1 1 1 1 1 1 1 1 1 1 38
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
894 PF00447 HSF_DNA-bind 3.50E-31 CL0123 Bhi TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi04g00527 Bhi_Chr04 FPKM 14.842478 15.445629 11.130498 12.362715 17.600384 16.005428 18.505524 10.720613 10.254544 11.072774