Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00561 CTATTTTTCCTTCTCTTTCCGCGTAGCGATCACGTTGTCTTCGATTGAGCGAGGGATTTTTTTCCCCTCCTGAAGAAGCAGCGTTTCGCCGTCTTTTATCGTCTTCAACTTCAACCTCAACCTCAACCTCAACCTCAAACCCTTTCTCCAAGTCAGAGATCGGGTATTTACCCTGTTTATTGTATTTTCTCCTTGGTTCCTGTTAGGGTTTTGTTTCTATTAAGTTTTCTTTCGCCATACTTTCCGTCCCAGGAAAACAGAAATTCTAGGTTCCAATTCTTGGATTGAATTAGCTCTTTGCAGAATTTGTACTTGCGTTTTTATGTGTTTCAATTTTGTAATTTCGTTCAAAGGGTTCAGTCAAATTTTGAACTGAATTTTGACTTCTTAAGCTTGAAGGTAGTTATCGAGTGTGTTTACGGTTTCGTCTCGAGCTTGTAGTTTCTGTGTAATTATGGCGGCTGGGCGACATGGAGGTTACCGTGAGAACGAGTTCAGGGACCGGGAGACCAATTTTCATGTGTCGAGGAGGTCGTTTGGCAGTGCTAGACAAGAGTTTGATAGAGTTAAGATGAGCAATGATGATCATGCTGTTCGTCGGAGTCTAGCGCGGGACGTCAAAGACAAGGTTAGGGTTAGGCACCAAGATATGAAGGAGAACGCGGTTGTTAATGGTCATTATCGTTCGTCTTCTACCAGGGGCAATTCAAGTAACAGTGATGGTGGTGTCAGTGGTAGTGATTATGGCCCGATTGAAAATAGGGTTTCTAGTACCATCGACAGGGAGCCGGGTGAGTTATCCAGTGAGAGTGGTTCTGATGCAATTGGTTTGGCGGTCAAAGACAGACAGGTTTCAGAAGTAGTAAACAATGGGAAACTATCTTCTATGAAGAAGAAAAGAAAATTTTCGCCTATAGTTTGGGATAGTGACGACAACAAATCGAGCTATGCATCCTGTAATGGGACTGCCTCAACAGTGATGGGTCTTCCACCGCCCCAGAAGTTGACTCGCCAGTCTCCTAATATCATCTTAGACCGAGGTGAACATACATCTTCAGTTAGGAATAGTGATAGTGAAAATTTTGCATCTTCTTCTGAATTTAAATCTCCTTTAGTCTCTGGACTTGAAATGTCTGAGTCATTAGCCTCTCCTGTTTTACGAAAGAATTTACACCATAATGTAGAAGTAGAATTGTTAGATAATGAAAATAATGGCCCAACAAGGAATATCTCATTTTCAAGGTGGGCAGGTGGAAATACCTCCCCAGCTGATGAAGGTGAGGTTTTAGATGATAAAGAAATGCTAAGACAAAAGATCCTAATTAGTGGAATTCGGGAAACTGAGCTACATGGCAAGACCCCGAGTGACTTATTTTCTGAGGCTGGGGACCTCAAAAGCAATGGTTTCAAGTCAAGTGGAATGAGAGTGAGGTCATCTGAATCCAATGAACGAGGTGCCCACTGTAGATTTGATTCTGGTGGTGATGCGGAAAAGGAGGACTACATTGAGGTTGATGAGAGACATGATATTAGTGATGTTAGTTTTAGTCCCTCAGATACCGACTCTGATGATGATGTTTGCGCCACCCATGAACCTCCAACAACCACTCAAAGAAGTGTGAACATGCTTCAGGGATGCAGAAGTGTTGATGAATTTGAGAGATTAAACAAGATCGACGAAGGCACCTATGGAGTTGTGTTTAGAGCTAGAGACAAGAATACTGGGGAAATTGTGGCCTTGAAGAAGGTAAAAATGGAGAAGGAGCGGGAAGGGTTCCCGCTGACTTCCTTGAGAGAGATAAATATTCTTCTTTCATTCCATCACCCATCCATTGTTGATGTGAAGGAAGTTTTGGTGGGGAATAGTCTTGATAGCATTTTTCTGGCCATGGAATACATGGAACATGATCTTAAAGGACTTATGGAAACCATGAAACATCCTTTTACTCAGAGTGAAGTAAAATGCCTGATGATTCAGCTATTGGAGGGTGTTAGATATCTCCATAGTAACTGGGTGCTTCATAGAGATTTGAAGACGTCTAATTTGCTTTTGAACAACCAGGGTGAACTGAAGATTTGTGACTTTGGATTGGCTCGGCAGTATGGAAGTCCTTTGAAGCCATATACACATTTAGTTGTTACACTTTGGTACAGGGCACCTGAACTACTGTTGGGAGAAAGACAGTATTCCACCGCTGTTGATATGTGGTCGTTGGGTTGTATCATGGCTGAACTTTTATCTAAGGAACCTCTTTTTAATGGGAAAACTGAAGTTGAGCAGCTTGATAAGATTTTTAGAACTCTAGGCACTCCAAATGAGACTATTTGGCCTCGATTCTCCAAGCTACCTGGTGTTAGAGTCAACTTTGTCAAGCATCAGCTTCCAGCTTTGGGTTCAATCTGCTTCGTAAGAAATTCCCTGCTGCATCATTTACTGGCTCCCCAGTTCTATCTGATTCTGGGTTTGATCTGTTGAGCAAACTTCTGACATATGATCCTCAAAAGAGAATATCAGCTGAAGAAGCTCTGGATCATGAGTGGTTCCGTGAAGTGCCTCTCCCCAAGTCTAAGGAGTTCATGCCCACGTTCCCTGCTCAGCATGCCCAAGACAGGTAGCT 2618 42.67 MAAGRHGGYRENEFRDRETNFHVSRRSFGSARQEFDRVKMSNDDHAVRRSLARDVKDKVRVRHQDMKENAVVNGHYRSSSTRGNSSNSDGGVSGSDYGPIENRVSSTIDREPGELSSESGSDAIGLAVKDRQVSEVVNNGKLSSMKKKRKFSPIVWDSDDNKSSYASCNGTASTVMGLPPPQKLTRQSPNIILDRGEHTSSVRNSDSENFASSSEFKSPLVSGLEMSESLASPVLRKNLHHNVEVELLDNENNGPTRNISFSRWAGGNTSPADEGEVLDDKEMLRQKILISGIRETELHGKTPSDLFSEAGDLKSNGFKSSGMRVRSSESNERGAHCRFDSGGDAEKEDYIEVDERHDISDVSFSPSDTDSDDDVCATHEPPTTTQRSVNMLQGCRSVDEFERLNKIDEGTYGVVFRARDKNTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVLVGNSLDSIFLAMEYMEHDLKGLMETMKHPFTQSEVKCLMIQLLEGVRYLHSNWVLHRDLKTSNLLLNNQGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGERQYSTAVDMWSLGCIMAELLSKEPLFNGKTEVEQLDKIFRTLGTPNETIWPRFSKLPGVRVNFVKHQLPALGSICFVRNSLLHHLLAPQFYLILGLIC 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 13402366 13405966 - XM_039028771.1 Bhi04g00561 32170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00561 673 MobiDBLite consensus disorder prediction 73 93 - -
Bhi04g00561 673 SMART serkin_6 401 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g00561 673 SUPERFAMILY Protein kinase-like (PK-like) 393 642 IPR011009 -
Bhi04g00561 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 521 533 IPR008271 GO:0004672|GO:0006468
Bhi04g00561 673 MobiDBLite consensus disorder prediction 1 123 - -
Bhi04g00561 673 Pfam Protein kinase domain 401 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g00561 673 Gene3D Transferase(Phosphotransferase) domain 1 484 659 - -
Bhi04g00561 673 ProSiteProfiles Protein kinase domain profile. 401 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g00561 673 MobiDBLite consensus disorder prediction 301 384 - -
Bhi04g00561 673 PANTHER CELL DIVISION PROTEIN KINASE 120 646 - -
Bhi04g00561 673 MobiDBLite consensus disorder prediction 8 70 - -
Bhi04g00561 673 CDD STKc_CDC2L1 395 642 IPR045267 GO:0004674|GO:0005524|GO:0006468
Bhi04g00561 673 Gene3D Phosphorylase Kinase; domain 1 384 483 - -
Bhi04g00561 673 PANTHER - 120 646 - -
Bhi04g00561 673 MobiDBLite consensus disorder prediction 329 363 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00559 Bhi-Chr4:13401418 Bhi04g00561 Bhi-Chr4:13402366 0 dispersed
Bhi04g00561 Bhi-Chr4:13402366 Bhi07g01880 Bhi-Chr7:50868900 0 dispersed
Bhi04g00560 Bhi-Chr4:13401418 Bhi04g00561 Bhi-Chr4:13402366 0 tandem
Bhi04g00561 Bhi-Chr4:13402366 Bhi07g01879 Bhi-Chr7:50868899 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87663 PF00069 Pkinase 6.70E-65 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00561 K08818 - csv:101221702 1046.19