Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00589 TGTACATTATAACTGCTCCCTCCCTATGCTTGCTAATATAATTTCATTTTTATATACTTTTATTCCTTTTTCTGCACTGTCTTTGATTAATTATTATATGGTCATTTCAATGCTTTTGTATGGAAAAAAAATAATATATATGGAAGTTGTGCTTCAACTAAGCAGGTCCCTTGTAAAGATGCCTTTTTCCCCATCTGATATTCTTTCACCTCTTTCATTTTGCTAAGGGAGTTACCTTTCCCTTATTTTATTTCTCTGTTTTTGTTGTTTATTTTGTAAATATATAACATTCTATGAATCTTTTGAAGGGAACAGTTAGGCTCTTGTATTAATTGGTTCCTCTTTCTATCTCTTTAAACTTGGGCCATTTTTAAAACCAAGAGAATTTTGAAGTTTTTAAGGCTCTTTCCTCAAAAACTGTTGCAAACTCACTGTTCATTTTCTCCTTCCTAATCTCCACCAGAGCACCATCCTCATGGAAAATGGCTTCTCTTCTCCTCGAAATGATGCGTTTCCTATCGGTCTTCGTGTTCTTGTTGTTGATGATGATCCAACATGGCTGAAAATCCTGGAAAAGATGCTCAAGAAGTGCTCTTACGAAGTGACTACATGTTGTTTGGCAAGGGAGGCTCTGAGCCTGCTTAGGGAGAGAAAAGATGGATACGATATCGTAATCAGCGACGTCAACATGCCTGATATGGATGGCTTTAAACTCCTTGAGCATGTGGGATTGGAAATGGACCTGCCAGTTATCATGATGTCGGTTGATGGAGAAACGAGTAGAGTAATGAAAGGGGTCCAACACGGTGCTTGTGATTATCTTCTGAAGCCAATACGAATGAAAGAACTTAGGAATATATGGCAGCACGTATTGCGAAAAAAAATACAGGAGGGAAGAGATATTGAAGGCCATGATGTTATTGAAGGCATCCACATCCTAAGAAATATGGCAGATAGGTATGATGATAGCCAGTTCCTCAGGGGAGAGGAACTATTTTCAGTGAGGAAACGAAAAGATATTGATAAGCATGAGGACAAAGACTTTTGTGACACTTCTTCCACAAAGAAAGCAAGGGTTGTTTGGTCAGTTGATCTGCACCAGAAATTTGTAAAAGCAGTAAACCAAATAGGTTTTGACAAAGTTGGCCCTAAAAAGATACTTGATCTGATGAATGTTCCATGGCTAACTAGGGAAAATGTAGCTAGCCACTTGCAGAAATATCGCCTCTATTTGAGTCGACTACAGAAAGAAAATGATCCAAAAGCTTGCTTTGTTGTTGGGATGAAACAAACTGATTCGTGTTCAAAGGATGGAGATGGAAACTTCAGCCTTCGTAGCTCATTAGCCATGCCACAAAATGATATCACAAATAGCAACTTCAGTTTCTCAGGTGATAACTTCCTGCTACATAATGTAGATTCCATAGGCTGCGAAGTTGATAGGAAAAGGATTGTTCAAGAGCAAACATCAGAGCCAAAAAGAGCTGCTACTAGGAGTGTTCCTGAACCGATAAAGACACGATGTACGCAGATGAAATTCAGCAATTCTATTCACTCTGTTGAACCTGAAGGGAAGTTTGCAGCATTTGATCCAAGCAACCGAAGCTGTTATCCTTGGGTTGAAGCTCCAGAAATCAAGTTCAAACAAGAAAACAAGCCAATTGTGCATTTAGAAGGAGATTTCAGTCAATTCCCTCCAACGGTTCCACCACATCAAGTTCAAATGGACCAACTACAATCGATTTCATCCATTAGTTCTGGATGGTCAGCAACAGAGAAAGATAAAGCAAGCTCCATTGAAAGTAAGCCTCCATATTCTGAGGACTGTAGCCAACAGATGGTCCATTTAAATCTACCAAAAACTCCAACTGATTCACTTTCTGGCAAGGCTAAGAGTTTCAATGAGATGAATGACCATTTTGATCCCAATTCAACTACTACTACTCCAATGGGCAAAAACCAGAATTTCAATCTTAGCTGCATTTCAAATGATTTAGGAAGTGGGTTAACTTTTGCAACCATTGATGAAGACTTGCAGGGCTATTTGCTTCAAGATGGCTGCTATCCAAAGAACCTTGAACATCAGATTATAGAGTTTCCAGATTATGGTGATCCAGGCATCTTCACTGAAGTTCCTACTCACCTTTACGATGCAATGAGGTTTGGCTATGATTATTCCTATGACCCAACTGAGTATCCGGTGATAGATGAAGGCCTATTTATTGCATGATTATGCTATTTACATACTCCCTCTGTATGCAAGGAAAAATGATGTCTTGCTAATAAGTAAGTTCCTTAAATTAACGGATTGAATATTACCTTCCCAACCTATTGGGATTTGGATTTTGAAATGTGTATATAGAAGTAGTAATGAAAAACTTCTTCAA 2387 38.46 MENGFSSPRNDAFPIGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLAREALSLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVLRKKIQEGRDIEGHDVIEGIHILRNMADRYDDSQFLRGEELFSVRKRKDIDKHEDKDFCDTSSTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLSRLQKENDPKACFVVGMKQTDSCSKDGDGNFSLRSSLAMPQNDITNSNFSFSGDNFLLHNVDSIGCEVDRKRIVQEQTSEPKRAATRSVPEPIKTRCTQMKFSNSIHSVEPEGKFAAFDPSNRSCYPWVEAPEIKFKQENKPIVHLEGDFSQFPPTVPPHQVQMDQLQSISSISSGWSATEKDKASSIESKPPYSEDCSQQMVHLNLPKTPTDSLSGKAKSFNEMNDHFDPNSTTTTPMGKNQNFNLSCISNDLGSGLTFATIDEDLQGYLLQDGCYPKNLEHQIIEFPDYGDPGIFTEVPTHLYDAMRFGYDYSYDPTEYPVIDEGLFIA 584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 14084815 14088242 - XM_039029251.1 Bhi04g00589 32198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00589 584 CDD REC_typeB_ARR-like 19 133 - -
Bhi04g00589 584 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 492 - -
Bhi04g00589 584 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 198 251 IPR006447 GO:0003677
Bhi04g00589 584 Gene3D - 194 257 - -
Bhi04g00589 584 Gene3D - 17 173 - -
Bhi04g00589 584 SUPERFAMILY CheY-like 16 141 IPR011006 -
Bhi04g00589 584 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 492 IPR045279 GO:0009736
Bhi04g00589 584 Pfam Response regulator receiver domain 19 128 IPR001789 GO:0000160
Bhi04g00589 584 PIRSF RR_ARR_type-B 1 534 IPR017053 GO:0003677|GO:0003700|GO:0009736
Bhi04g00589 584 SMART REC_2 17 129 IPR001789 GO:0000160
Bhi04g00589 584 SUPERFAMILY Homeodomain-like 196 255 IPR009057 -
Bhi04g00589 584 MobiDBLite consensus disorder prediction 426 449 - -
Bhi04g00589 584 Pfam Myb-like DNA-binding domain 200 250 IPR001005 -
Bhi04g00589 584 ProSiteProfiles Response regulatory domain profile. 18 133 IPR001789 GO:0000160
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00589 Bhi-Chr4:14084815 Bhi09g02983 Bhi-Chr9:77402042 7.88E-88 dispersed
Bhi04g00589 Bhi-Chr4:14084815 Bhi12g01898 Bhi-Chr12:60731990 1.80E-97 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
900 PF00072 Response_reg 1.20E-24 CL0304 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00589 - K14491 csv:101204370 1094.72