Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00746 GATGAAGGTGAAACAGAGTGAGGCCGAGCGAAATTCACAATTTTCCAAAGGAAAAAGAAAAAAAAAGAAAAAATTCGGGAGATTTTTCAGTGACTGTTCTTGTTTTCGATCTTCGTCTTCTTCTTCAATTCCCCCCTCTGTAATCCCCGCTTCTCTGAATCCCTTTCTGTTAATCATCTGTCTTTCAGTTTTCTGATTTTTGGGTTTGTTTTAGAATTGAACAGAAAAAGCAAACTTAAGAAAAAGGGTTTCTCGAAAGCACAGATAGACTTCGAGGGTTGTTTTTTGATCCCTCTTGGAGTTGAAAGGGTCGGTTATTACAGTACAAACCCTTTTCTCTGTAGAAACACTACTTGTTTTCTTCTTCTTCTTGTTTCTGTTTTGAATTTAGTAGAGAAATTATGGCTGCTTTGATGGATTTTTATGGTTGCAGAGAGATTCAGTCAGATCCATTTGGTGGTGAATTAATGGAAGCACTTGAACCTTTTATGAAAGTTGCTTCCTCTTCTTATTTTCCTTCTTCTTCTCCAGATTTCTCTTCCTCTTCTTCTATCCAAACAGAGTCCACTTCTTATCCTTCTGATTACTCTCCTCCGATGACCCATTTATTTTCCAGTGGGTTTTCGGGTCAAGATTTCCATGGCGTAGAGCAATCAGCTTCTATTGGACTCAATTACCTGACCCCCTTTCAGATCCAACAGATCCAATCTCAATTCGGTCTCCAGACACAAATCCAGCCAGTTTGGGGACAGATCAACAACCAAATAGCGAGAAATCAGAGCAACAGCGCCGGAAATTTGCTTGGACCGAAGGGGATTCCGATGAAACACGTCGGATCTCCACCGAAATCGACGAAGCTTTATCGAGGCGTGAGGCAAAGGCATTGGGGAAAATGGGTGGCTGAGATCCGTCTTCCGAGGAACAGAACTCGGCTATGGCTTGGCACCTTCGACACCGCCGAAGAAGCCGCTTTAGCCTACGACAAAGCCGCTTACAAACTCCGAGGCGATTTCGCCAGACTTAATTTCCCTCACCTCAAGCACCATGGCTCCTCCGTCGGCGGTGATTTCGGCGAGTACAAACCGCTACACTCCGCCGTCGACGCCAAGCTCGAAGCCATCTGCCAAACCTTGGCAGAGTCGCAGAAACAGGGGAAATCGGATCGAAGGAAGTCGAAGTCATCGGGTTCTCCTACCTTCGGATCGGAGTCTCAGACACCGACGGTGATCGATTCCGACGACGAAGTGAAGGCGGTGGATGGTAGATCAAGTGGATCGGAGATCTGTTGCAAGGCGGAGAAGTCCTCGTCGCCGGTTTCTGGCGAGAGTGATGAGTCAGCAGGGTCTTCGCCTTTATCGGATCTGACGTTCCCGGATACGACGGATTCGGCATGGGAACAGGCTACAGAAAGGTGTATGTTGCAGAAATATCCATCGGAAATCGATTGGGCATCGATATTCACGAGTTGATGTATGAATTTGAAAGTGTATTAGTATTAGTTTTGATTAGGAGTGTTGTATGGTTTTAGGTTGGATTCTGCGACTAAGTTTTTGCAGTTGGCAGAATCAGTTGTACGTGATTTGTGTAGGGCTTCAAAGGGTTATATATTATATTAATAAATTTGGTTTAGGAAGGGAAAATGTCCGGCACCGCCATGGCCGGCGGCCAACTTTTTTGAGCTGTTGGGGCGGCGGGAGGGGATGTACAAGTAATGGGGTAGGGAGTAGATTTCTGTAATGTAATATTGTTCAGTTAATAATAATTTATTATTATGTTGTG 1779 44.91 MAALMDFYGCREIQSDPFGGELMEALEPFMKVASSSYFPSSSPDFSSSSSIQTESTSYPSDYSPPMTHLFSSGFSGQDFHGVEQSASIGLNYLTPFQIQQIQSQFGLQTQIQPVWGQINNQIARNQSNSAGNLLGPKGIPMKHVGSPPKSTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPHLKHHGSSVGGDFGEYKPLHSAVDAKLEAICQTLAESQKQGKSDRRKSKSSGSPTFGSESQTPTVIDSDDEVKAVDGRSSGSEICCKAEKSSSPVSGESDESAGSSPLSDLTFPDTTDSAWEQATERCMLQKYPSEIDWASIFTS 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18265145 18267047 + XM_039029214.1 Bhi04g00746 32355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00746 355 Pfam AP2 domain 154 202 IPR001471 GO:0003700|GO:0006355
Bhi04g00746 355 Gene3D AP2/ERF domain 153 211 IPR036955 GO:0003700|GO:0006355
Bhi04g00746 355 PRINTS Ethylene responsive element binding protein signature 154 165 IPR001471 GO:0003700|GO:0006355
Bhi04g00746 355 PRINTS Ethylene responsive element binding protein signature 176 192 IPR001471 GO:0003700|GO:0006355
Bhi04g00746 355 MobiDBLite consensus disorder prediction 246 330 - -
Bhi04g00746 355 ProSiteProfiles AP2/ERF domain profile. 153 210 IPR001471 GO:0003700|GO:0006355
Bhi04g00746 355 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-4 1 352 - -
Bhi04g00746 355 MobiDBLite consensus disorder prediction 295 330 - -
Bhi04g00746 355 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 352 - -
Bhi04g00746 355 SUPERFAMILY DNA-binding domain 153 211 IPR016177 GO:0003677
Bhi04g00746 355 MobiDBLite consensus disorder prediction 260 277 - -
Bhi04g00746 355 CDD AP2 152 212 IPR001471 GO:0003700|GO:0006355
Bhi04g00746 355 SMART rav1_2 153 216 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00746 Bhi-Chr4:18265145 Bhi12g01500 Bhi-Chr12:48382317 9.62E-34 dispersed
Bhi01g02928 Bhi-Chr1:72616175 Bhi04g00746 Bhi-Chr4:18265145 2.15E-40 transposed
Bhi09g02625 Bhi-Chr9:70833421 Bhi04g00746 Bhi-Chr4:18265145 5.81E-104 transposed
Bhi03g01206 Bhi-Chr3:25006490 Bhi04g00746 Bhi-Chr4:18265145 8.40E-98 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
905 PF00847 AP2 4.70E-15 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00746 K09286 - csv:101222833 590.497