Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00791 CTTACTCTTTCTCTTTCTCTTTCACTGTCTTGCTGCTGTGTGAGTACTGATACACACATTGCAATCTCACGTGCAGTTTGTTCTCTTGTAATGCTTTTCTTTTAATCAATTCTTTTTTTTCTTTAAAAAGCCCTTACCCTTTTCTTTTTTCTCCATGAGCTGGGAAAAAAAAGAAAAAAGAAAAAAGGAAAAGCTAAGCTTGGTTGTTGGGAGGTCTTTTGGGTTTGTCTTCAATTTTGCTTTTATATAAATATTTCCCCTCTTCGTCTCCTTCTTCCTTTCAAATTTGGGTCTCTCTCAACCAAACAAACAAAAACAACCCCCCAAATTTCTCTTCTTTTCTCTCTCAAATCCGTCTCTCTTTTTATGATCGAGAAGTTGAAAAACAGAGTGATCGTTGATGATGGCATTGGAAACTGTGGTTTACCCACAAGATACATTTAGTTATGTTTGCAGGGATTTCTGTTCTTACGGAGGAGGAGGTCCTTGGGGTAGTTACGATTATGGCTTCCAATTAGAAGAACAAAAAGCCTTCCTAGGAGTCATTCAAAACCAAACAGAGGACCAAAAATTGGCTACTAGTTGGGAGGCTTCACCGGAGGAATGTTCAATCAATCAACCACTCTCCGGAGGAGCTCTCTACCCGCCAGTGGAAGTAGAACCACCACCACCACTGCCAACCACCGGAAGAAGAAAACGGCGGCGGACCCGTAGCACGAAAAACAAAGAAGAAATTGAAAACCAGAGGATGACTCATATCGCCGTGGAACGTAATCGCCGGAAGCAAATGAATGAGTATCTTTCCGTTCTCCGATCATTAATGCCATCTTCTTACGTTCAAAGGGGAGACCAAGCTTCCATTATTGGTGGTGCCATTAACTTTGTCAAGGAATTAGAACAACAACTGCAATTCATTAAAGTCCATAAAGAACAAACTGGTACCTCCCCTTTTGCCGACTTCTTTTCCTTCCCTCAATACTCAACTCGTGCCACAACTCAGTCCAAAAACAACAACTCGCCCCATGACTCGTCCATCGCTCACACCCAATGGCCCGCCGGGGACATTGAAGTCACTATGGTCGACAGCCATGCCAACCTTAAAATACTGTCCCAAAAACGCCCAAGACAGCTCCTTAAAATGGTGGCTGGATTTCAAAGCTTGAGACTTACTATTCTTCATCTCAACGTTACCACTTCAGATCAAATGGTTCTTTATTCTCTAAGCATTAAGGTTGAAGAAGGATGTCAGTTGAATACGGTGGATGAAATTGCTGCAGCTGTGAATCAAATCCTACTCTCTATTCAAGAGGAAGCCGTTTTTAGCTGACATAGCTTTAATTTAATCTGTGTTCTTTTTATGAATGTAATTTCTAATTTGTTAAGAATATCTTCCCATTTTGGCCTTAAGGTGATCCAACAATTTTCCATGTAAAAGAAGCATATAGCGTTGGTTCCTTTCTCATCTGTTCCATTTTAATTTCATGAAATTGGTAATTACGTACTA 1504 40.62 MMALETVVYPQDTFSYVCRDFCSYGGGGPWGSYDYGFQLEEQKAFLGVIQNQTEDQKLATSWEASPEECSINQPLSGGALYPPVEVEPPPPLPTTGRRKRRRTRSTKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPSSYVQRGDQASIIGGAINFVKELEQQLQFIKVHKEQTGTSPFADFFSFPQYSTRATTQSKNNNSPHDSSIAHTQWPAGDIEVTMVDSHANLKILSQKRPRQLLKMVAGFQSLRLTILHLNVTTSDQMVLYSLSIKVEEGCQLNTVDEIAAAVNQILLSIQEEAVFS 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19588772 19590823 - XM_039028296.1 Bhi04g00791 32400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00791 308 Pfam Helix-loop-helix DNA-binding domain 115 166 IPR011598 GO:0046983
Bhi04g00791 308 PANTHER MAX DIMERIZATION, MAD 2 307 - -
Bhi04g00791 308 SMART finulus 120 171 IPR011598 GO:0046983
Bhi04g00791 308 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 114 165 IPR011598 GO:0046983
Bhi04g00791 308 Gene3D - 108 178 IPR036638 GO:0046983
Bhi04g00791 308 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 114 182 IPR036638 GO:0046983
Bhi04g00791 308 MobiDBLite consensus disorder prediction 79 112 - -
Bhi04g00791 308 PANTHER HELIX-LOOP-HELIX-LIKE PROTEIN 2 307 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00645 Bhi-Chr1:11850739 Bhi04g00791 Bhi-Chr4:19588772 5.95E-56 dispersed
Bhi01g00646 Bhi-Chr1:11851075 Bhi04g00791 Bhi-Chr4:19588772 6.74E-47 dispersed
Bhi01g00857 Bhi-Chr1:16161798 Bhi04g00791 Bhi-Chr4:19588772 7.32E-39 dispersed
Bhi02g02012 Bhi-Chr2:54377772 Bhi04g00791 Bhi-Chr4:19588772 8.46E-77 dispersed
Bhi04g00791 Bhi-Chr4:19588772 Bhi05g00483 Bhi-Chr5:10178743 2.10E-69 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
907 PF00010 HLH 4.40E-10 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00791 - - csv:101218813 514.612