Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00810 AAAAATTGATGGCCACTCTCTCATCCCCTCTCTTATCCTTTCTTTTCTCCCCTCTTTAAATTATATATTTTTTATTATTCTCCAAAAGGGTTAACTTGAAAACCCCCCCAAAAAATTACTTTTTTAATTTTTTAAAAAATATTTTGTTGTTTTGTTTTATTTATAAACACATCTGAAGAAGATATACAGAACCCATATTTTGTTTTGTTTTAATCTAATCTCCGGCAAAAGAAAGTTTTCATTTTTAATTTTTTTTTTCAAAAAAAAATCGATTTTTTTTGGGGATTCTTCAAAAATGGAATTTGACGAGGAGAACGACGATGAAATAATGGAAGAGATGCCAATCGCCACTCACCACTACGACTCGCTCAGTAACTCAGCTTCAACTCGGCCCAAACACGGAGAAGGTTCATCGGCGGTGAGAAAAAGCAGCAGCAGCAGCAGCGGAGGGAGTAATATTAGATATAGAGAGTGTTTGAAGAATCACGCCATCGGAATCGGCGGACACGCGGTGGACGGTTGCGGCGAATTTATGCCGGCGGGAGAAGAAGGGAGTATAGATGCACTAAAATGCGCCGCCTGTAACTGTCACCGGAATTTTCACCGGAAAGAAACGGATTCAGATCAAGGACATTACTATTACCAACAACAGCAGCTACAAATTTGTTCATATCGTGGGCCCACCCCGCACCCATCTGCTTACGTGTACTTAAGAGGAGCCCCAGTTCAACCAAGGGCGTTGGCGTTGCTGGCGGCGGGGAGGGAGGAGGATGATACGTCAAATCCGAGTAGTAGTGGCGGAGGAGGCGGCGGCGGCGGAGGAAGTGGAAGTGGGTTGTTGAAGAAGAGATTTAGGACAAAGTTTAGTACAGAGCAAAAGGAGAAAATGTTAGGGTTTGCGGAGAAAGTTGGATGGACAATTCAGAAACACGACGAGGCTGACGTGGAACGATTCTGTACGGAAACCGGAGTCCGTCGGCAAGTACTTAAGGTGTGGATGCATAACAATAAGCATACTTTGGGGAAGAAACCCTAAATTTAATTAGGGTTTTGTTTCATTTTAATTTGGTGAGTTTAATTAGCAATGGATTATTATTATTGATCTTCTTCTTTCTTCTTCATGATGATTATGATCATGTTCTTTAGTGCATTGTTGAAGAAAAATTCCCAATTTAGGGGTTGAAAACTAGGGTAGATTAACTAGGGGCTTTTTTTGGGATGAGTTTGAGTAGTTTTGAAGTTTTTTGGGGGGAAGGTATGAATTTGATGAGGATGATGATGTTAAGAATTAAAAAATGAATTGCACACACCATTTATTAATGGGGTTGTGTTGAAAATTTGAAA 1344 40.33 MEFDEENDDEIMEEMPIATHHYDSLSNSASTRPKHGEGSSAVRKSSSSSSGGSNIRYRECLKNHAIGIGGHAVDGCGEFMPAGEEGSIDALKCAACNCHRNFHRKETDSDQGHYYYQQQQLQICSYRGPTPHPSAYVYLRGAPVQPRALALLAAGREEDDTSNPSSSGGGGGGGGGSGSGLLKKRFRTKFSTEQKEKMLGFAEKVGWTIQKHDEADVERFCTETGVRRQVLKVWMHNNKHTLGKKP 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20322896 20324239 - XM_039029631.1 Bhi04g00810 32419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00810 246 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 37 245 - -
Bhi04g00810 246 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 183 239 IPR006455 -
Bhi04g00810 246 Gene3D - 169 244 - -
Bhi04g00810 246 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 37 245 - -
Bhi04g00810 246 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 56 106 IPR006456 -
Bhi04g00810 246 SUPERFAMILY Homeodomain-like 170 244 IPR009057 -
Bhi04g00810 246 MobiDBLite consensus disorder prediction 1 53 - -
Bhi04g00810 246 MobiDBLite consensus disorder prediction 21 53 - -
Bhi04g00810 246 MobiDBLite consensus disorder prediction 155 182 - -
Bhi04g00810 246 Pfam ZF-HD protein dimerisation region 55 107 IPR006456 -
Bhi04g00810 246 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 57 106 IPR006456 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00810 Bhi-Chr4:20322896 Bhi06g00400 Bhi-Chr6:8781289 1.64E-50 dispersed
Bhi08g01167 Bhi-Chr8:36727427 Bhi04g00810 Bhi-Chr4:20322896 2.93E-22 dispersed
Bhi08g01168 Bhi-Chr8:36727427 Bhi04g00810 Bhi-Chr4:20322896 9.09E-23 dispersed
Bhi01g02358 Bhi-Chr1:57657076 Bhi04g00810 Bhi-Chr4:20322896 4.57E-45 transposed
Bhi04g00174 Bhi-Chr4:4152079 Bhi04g00810 Bhi-Chr4:20322896 2.31E-53 transposed
Bhi11g00836 Bhi-Chr11:23129785 Bhi04g00810 Bhi-Chr4:20322896 1.92E-52 transposed
Bhi03g01151 Bhi-Chr3:23235117 Bhi04g00810 Bhi-Chr4:20322896 6.65E-15 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
908 PF04770 ZF-HD_dimer 2.60E-30 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00810 - - csv:101216697 388.267