Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00846 TCAAAACCAAACAAAAAATCCCCGAACCCTCAAAATCCAAAATCCCCTGTTTTCCCCGACTTAACAATGAGCAGTAAACAAATGAGTCCTTCTTCAGAAACAGAGTCTTCCACCACTTCATCTTCTTCCTCAGACTCAAACAAAAAACCCAAACGAATCAACAACAATTCCACTTCCAATTCAAAACACCCACTTTACAGAGGCGTTCGTATGAGAAATTGGGGGAAATGGGTATCTGAAATTCGAGAACCAAGGAAGAAATCCCGCATTTGGTTAGGAACTTTTCCCAGCCCTGAAATGGCTGCTCGAGCTCATGATGTTGCAGCTCTAAGCATCAAAGGAAATTCCGCTATTCTTAATTTCCCTGATCTTGTTCATCTTCTTCCTCGCCCTGTTTCTCTTGCTCCTCGTGATGTTCAAGCCGCCGCCGCTAAAGCTGCCCATATGCATAATCTTTCATCTAATACTAATCATAGTACTAACAATAATAATAATACTAATTCCTCCTCTGCTTTCTCCGATGAACTTACTGAGATCGTTGAGTTACCCAGTCTTGGAACGAGTTATGACGGTGGTGGTGGTGGTGGTGAGTTTGTGTTTGTTGACTCGGAATTGGAATCGGGTGCGTGGCTTTACGCGCCGCCGTGGCTTCAGAGCTTGGAGGAAGATTGTCATGATGATAATGGGGATTGTGGTAAGTTGGGAATGGGATTTCTTTCTAATGGGTTTAAAGGGTTTTTGTGGGATTATTGAAAAATCTATTGTATTTTACTTTCCTCTGTTTTGTTCTGTTCTGTTCATCAACTTTTTTTTTTTTTTTTTTTGCCACTTCTTCTTCAGTTCTTAAGGTTTATATTTCTCGAAATGTTTTTTTTTTGCTTTTCAGTCCTTTTGGTTTTTCTTTCAAAGGGCTTGAAAAACTCTGTTTTTCTCTCTTGTTGGCCTTATTTTTCTCTCTTCTTCAATGCATACAACTGTACAGTGTTGACTGTTGAAATGAAATGAAATCAATTCCCTCTTCTTTTT 1026 39.57 MSSKQMSPSSETESSTTSSSSSDSNKKPKRINNNSTSNSKHPLYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGNSAILNFPDLVHLLPRPVSLAPRDVQAAAAKAAHMHNLSSNTNHSTNNNNNTNSSSAFSDELTEIVELPSLGTSYDGGGGGGEFVFVDSELESGAWLYAPPWLQSLEEDCHDDNGDCGKLGMGFLSNGFKGFLWDY 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21311079 21312104 + XM_039029741.1 Bhi04g00846 32455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00846 228 ProSiteProfiles AP2/ERF domain profile. 43 100 IPR001471 GO:0003700|GO:0006355
Bhi04g00846 228 SUPERFAMILY DNA-binding domain 43 101 IPR016177 GO:0003677
Bhi04g00846 228 Gene3D AP2/ERF domain 43 101 IPR036955 GO:0003700|GO:0006355
Bhi04g00846 228 PRINTS Ethylene responsive element binding protein signature 44 55 IPR001471 GO:0003700|GO:0006355
Bhi04g00846 228 PRINTS Ethylene responsive element binding protein signature 66 82 IPR001471 GO:0003700|GO:0006355
Bhi04g00846 228 SMART rav1_2 43 106 IPR001471 GO:0003700|GO:0006355
Bhi04g00846 228 MobiDBLite consensus disorder prediction 1 42 - -
Bhi04g00846 228 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 5 203 - -
Bhi04g00846 228 CDD AP2 42 102 IPR001471 GO:0003700|GO:0006355
Bhi04g00846 228 MobiDBLite consensus disorder prediction 1 45 - -
Bhi04g00846 228 Pfam AP2 domain 42 92 IPR001471 GO:0003700|GO:0006355
Bhi04g00846 228 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 5 203 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g01202 Bhi-Chr2:28213831 Bhi04g00846 Bhi-Chr4:21311079 4.25E-61 dispersed
Bhi04g00846 Bhi-Chr4:21311079 Bhi06g02000 Bhi-Chr6:54954420 1.91E-54 dispersed
Bhi01g00563 Bhi-Chr1:10181030 Bhi04g00846 Bhi-Chr4:21311079 5.74E-42 transposed
Bhi04g00846 Bhi-Chr4:21311079 Bhi09g02579 Bhi-Chr9:70068021 1.77E-64 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
913 PF00847 AP2 1.40E-13 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00846 K09286 - csv:101206242 330.102