Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00862 AAAAGGAGGAGTAGAGTATGCTTTGCATAAACAAAGGCTAAGCTCTCCATATCTCTCTATTTCCATCGTTTTGCTCTTCTTCCTGCTCCTCTGTACTTCAAAATCAACTCACCCTTCTCTCTTCTTCTTTGTTTATCGTTCCATAGATCTCCCCCTTCCCTATCGCTGTGCCCTAGTGATTTTCCCACATTTTCTCCTCTCAATTTGAAATTTGGGGTTCCGATGACCCTAAATGCTTCCTGATTCTTCTTCTCCGGCGAAGTCTTTCGCCCTTCATGGACCACCATCTGTACCATGCCTGAGCTCCGTCGCAAACCAGGTAGGAGCCGGGTATCTGAAGACCCAGTACCGATTGCACACCAGACACCCATTAAGTTAACTGTAACAACACGCCACCGAGGGCAACCCGCTAAACGCAGTGGTGGGAAGAAGGGGAAAGACGCGATCGATGCCGATGGTGACAGGGATATTGTGAACCCTGGAATCGGTCTTGAAACGAGGCTACTGTGTGAGAATAAAGACGAAGTTGGGAAGGATAAAGACCTACTGCAGGTTGGTGTTAGAGTATTAGCTATGGACGAGTTCGATAGCGGTGGACGGAACGGCGATAAGGCTCCTGTAGCTGAAGATGAAGGCACGGCTACTCCTCTTCCGGAGAAGGTTCAGGTTGGTGGCTCTCCATTATATAAAGTAGAAAGAAAACTGGGTAAAGGGGGTTTTGGTCAGGTGTATGTGGGTAGACGGATGGGTCCTATGAGTTTGAATGAAAGATCTGGCCCTGGAGCTGTGGAGGTAGCCTTAAAATTTGAGCATAGAAGTAGTAAAGGGTGCAACTATGGACCTCCTTACGAGTGGCAGGTTTACAATGCACTAGGTGGTAGCCATGGTGTGCCACGAGTTCATTACAAGGGTCGGCAAGGTGACTATTATGTCATGGTGATGGACATGCTTGGACCTAGCCTCTGGGATGTCTGGAATAACAATGCTCACACGATGTCAATTGAAATGGTAGCATGTATTGCCATCGAGGCAATCTCCATATTAGAGAAGATGCATTCTAGAGGGTACGTGCATGGTGATGTGAAGCCTGAAAATTTTCTGCTCGGCCCTCCAGGAACCCCAGAAGAGAAAAAGTTGTTTCTTGTAGATCTTGGTTTAGCAACGAAGTGGCGAGATAGTTCGACTGGTCAACATGTTGAGTATGATCAACGACCAGACGTTTTCCGGGGAACAGTTCGGTATGCTAGTGTGCATGCACATCTTGGCAGAACTGCTAGTCGGAGAGATGACTTGGAATCGCTTGCTTACACTCTTGTTTTTCTTCTTCGCGGTCGGCTGCCTTGGCAAGGATATCAGGGAGAAAATAAAGGATTCCTTGTGTCCAAGAAGAAGATGGCTACTTCCTCTGAGACATTGTGCTGTTTTTGCCCTCAGCCTTTTAGACAGTTTGTTGAGTATGTTGTGAATTTGAAATTTGATGAAGAGCCAAACTACGCAAGATATATCTCCCTCTTTGATGGTATTGTCGGTCCGAATCCAGATATCCGTCCAATAAACACAGATGGTGCACAGAAACTTATATTTCAGGTTGGGCATAAGAGAGGAAGGCTATCCATGGAGGATGAAGATGATGAACAACCAAAAAAGAAGGTTCGAATGGGGATGCCTGCAACTCAATGGATTAGCGTTTATAATGCCCGTAGACCAATGAAACAAAGATACCACTATAACGTTGCTGATATGAGGCTCTCTCAGCATATTGAGAAGGGGAATGAAGATGGTTTATTTATTAGTTGTGTTGCTTCATGTTCGAACCTTTGGGCCCTTATTATGGATGCTGGAACTGGATTTACCGCTCAAGTTTATGAACTCTCACCATTCTTTCTTCACAAGGAGTGGATCATGGAACAGTGGGAAAAAAACTATTACATCAGTGCAATAGCAGGAGCTAATAATGGGAGCTCATTGGTGGTAATGTCGAAAGGGACTCAGTATCTCCAGCAATCCTATAAAGTCAGCGATTCATTTCCCTTCAAGTGGATAAATAAGAAATGGAGGGAGGGGTTTTACGTTACTGCCATGGCCACTGCCGGCAGTAGATGGGCAATTGTCATGTCACGTGGTGCGGGATTTTCTGACCAGGTTGTGGAACTAGATTTCCTGTATCCCAGTGAAGGCATTCATCGCAGGTGGGATAGTGGTTACCGAATCACATCAACTGCAGCAACTTTGGACCAGGCTGCTTTTGTTTTGAGTGTGCCAAGGAGAAAGCCTGCTGATGAAACTCAAGAAACACTCCGTACATCTGCCTTTCCTAGCACACATGTCAAGGAGAAATGGGCAAAGAATCTTTATATTGCATCTATTTGCTACGGCCGAACTGTTTCATGAAACACCCCCAAGTTGTTGCCACTTAGAGCCTGGACTTTTAACAGATGGTGCTCTTCTTTGGGCGGATATGAATTTTTAAGACACAATTGACTGGGGTTAATGGAGTTGACGTAACCAAACTGTTCAGTGACATCGCCAACGTATTGCATCAATTTTTGACACCTGTGCTCTGGCTTTCATTCATGTTATTCAAGTATGAGCTAATTTTAGATCTTTCATGTCCCTGGGGTTTGGGTATTTTTACCAATTTGTTAAAGGTTTTGTATAGTCTTGAGCACTAGTTCTTGGTTGAAGGCATGTGCACAGCATAGGTCATCTTTTCTGGGTGCTGGGGAATATGCTGTTATGGTTATCAAGCATCAGTGGGCTCTGGATATTCATACCCATTTTGCTTGTACTTAGATCTTTATCTCTCACCTTTTTGGAATTAAGGATATTCTAAACGTCTGAACCTGGAAGATATCAATTTTACACTTTTAAGCGACACTTCTAGTGGATTTTCTATCAATATAATCATTAGTTAACTGACGACTT 2925 44.38 MPELRRKPGRSRVSEDPVPIAHQTPIKLTVTTRHRGQPAKRSGGKKGKDAIDADGDRDIVNPGIGLETRLLCENKDEVGKDKDLLQVGVRVLAMDEFDSGGRNGDKAPVAEDEGTATPLPEKVQVGGSPLYKVERKLGKGGFGQVYVGRRMGPMSLNERSGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNALGGSHGVPRVHYKGRQGDYYVMVMDMLGPSLWDVWNNNAHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPEEKKLFLVDLGLATKWRDSSTGQHVEYDQRPDVFRGTVRYASVHAHLGRTASRRDDLESLAYTLVFLLRGRLPWQGYQGENKGFLVSKKKMATSSETLCCFCPQPFRQFVEYVVNLKFDEEPNYARYISLFDGIVGPNPDIRPINTDGAQKLIFQVGHKRGRLSMEDEDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVADMRLSQHIEKGNEDGLFISCVASCSNLWALIMDAGTGFTAQVYELSPFFLHKEWIMEQWEKNYYISAIAGANNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDSGYRITSTAATLDQAAFVLSVPRRKPADETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVS 698
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21655263 21660970 - XM_039029358.1 Bhi04g00862 32471

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00862 698 PANTHER CASEIN KINASE-RELATED 100 672 - -
Bhi04g00862 698 ProSiteProfiles Protein kinase domain profile. 131 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g00862 698 PANTHER CASEIN KINASE 1-LIKE PROTEIN HD16 100 672 - -
Bhi04g00862 698 SMART serkin_6 131 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g00862 698 MobiDBLite consensus disorder prediction 1 56 - -
Bhi04g00862 698 MobiDBLite consensus disorder prediction 97 120 - -
Bhi04g00862 698 Gene3D Transferase(Phosphotransferase) domain 1 104 454 - -
Bhi04g00862 698 Pfam Protein kinase domain 131 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g00862 698 ProSitePatterns Protein kinases ATP-binding region signature. 137 170 IPR017441 GO:0005524
Bhi04g00862 698 SUPERFAMILY Protein kinase-like (PK-like) 131 413 IPR011009 -
Bhi04g00862 698 MobiDBLite consensus disorder prediction 42 56 - -
Bhi04g00862 698 CDD STKc_CK1 131 407 - -
Bhi04g00862 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00862 - - - csv:101218249 1334.32
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bhi04g00862 Bhi09g02568 CCT
Bhi04g00862 Bhi09g02568 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00862 Bhi-Chr4:21655263 Bhi09g00456 Bhi-Chr9:9764569 0 dispersed
Bhi12g01608 Bhi-Chr12:52078886 Bhi04g00862 Bhi-Chr4:21655263 3.25E-50 dispersed
Bhi12g01609 Bhi-Chr12:52079598 Bhi04g00862 Bhi-Chr4:21655263 3.76E-58 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g5 . Blo12g01057 . Bda03g00159 . . . . Cmo05g00120 . . . . Car12g00229 Sed09g1609 Cpe07g00209 . Bhi04g00862 Tan02g2553 Cmetu03g1333 . Hepe10g0373 . Lcy13g1421 . . . . . . . . Cone7ag1308 . . . . . . . . . . . Bpe04g00141 . . . . . . Cma12g00246 . . . . Bhi09g02568 . . . Hepe01g2213 Mch11g0761 . Cla08g01215 Cam08g1676 Cec08g1254 Cco08g1373 Clacu08g1374 . Cre08g1159 . Csa02g02262 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000235 6 9 5 7 6 4 9 4 4 5 4 4 8 4 4 7 4 6 8 4 4 4 4 4 4 4 4 11 5 5 161
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87670 PF00069 Pkinase 7.80E-16 CL0016 Bhi PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi04g00862 Bhi_Chr04 FPKM 6.588131 7.69011 10.551839 9.714869 16.730238 15.361626 16.489651 8.717265 9.684977 9.670124