Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00868 TCTTCTCTCATTTTTCCACCAAAATTCCTCCAAAAAAAAAAAAAAAAAAAAAACCCAAAGAAAAAAAGAAAAAAAGAAAAAAAAAAGAGAAAATTTTGTAATTCCCACACACCCAAATGGAAGCTCCTGAATATTTCCAGATCAATGGGTACTGTTCCCAATTCTCAACGCACTCCTCCTCCGACACCGACACTACCACCGCCACCGCCACTGCCGGACCGGAGCATTTCATCGTGGAAGAGCTTCTGGATTTCTCCAACGACGATGACGGCGTAGTTGGCGACGGTGGAGGATTGTTTTACAATACTAACAATGGGAATAATAATAACAATAATTCAACGGAATCTTCCGCCGTTACGGTGATTGAGAGTTGCAATTCGTCGTCGTTTTCAGGTTGTGAACCAAACTCGTCGTTTTTGGAAGACATTAGTGGCTCTAATTTAGCCGACGCTCATTTCTCCAGCGAACTCTGCGTTCCGTACGACGATTTAGCTGAGTTGGAATGGCTTTCACATTTCGTAGAGGAATCATTTTCCAGTGAGGACATGCAAAAGTTGGAACTAATCTCCGGAGTCAAAGTCAGATCAGACGAACCCACCAATTCCCGACAACCCACCGCCACCCGAAACGCCGCCGCAATTTTCAAACCCGATATCGTTTCGGTTCCGGCAAAAGCCCGTAGCAAACGCTCACGCGCCGTCCCATCCAATTGGAACAACTCCCGCCTCCTTCCTCTTTCTCCAACCACCGAACCCGAAATTACCGCCACAGCCGGACCACCCCACCCCATAAAAAAAAACCCTCCCAAGGCCGCGACAGCCAAGAAGAAGGACAGCCCGGAGGTCGGAGTGTCATCCGGCGAGGGGCGGAAGTGCATGCACTGCGCCACCGACAAGACGCCGCAGTGGCGGACCGGCCCAATGGGCCCGAAAACGCTGTGTAACGCTTGCGGCGTTCGCTACAAATCCGGTCGCCTGGTGCCGGAGTACCGCCCCGCCGCTAGCCCCACCTTCGTTTTAACCAAACACTCCAATTCTCACCGGAAAGTTTTGGAGCTCCGGCGGCAGAAGGAGCTTCTTAGAGCCCAACAACAGCAACAACAACATTTGCTTTTGGATCATCATCAAGATATGATCTTTGATGCATCCAACGGTGATGATTATCTCATTCATCAACATATGGGCCCTGATTTCCGGCAGCTGATCTGACCGCCGCCCGCCGCCGCTAGGGGTAGAGTTCGGCCAATCTGATTCATTTTGGGTTTTTTCCCCCTGAAATTTTTA 1283 49.88 MEAPEYFQINGYCSQFSTHSSSDTDTTTATATAGPEHFIVEELLDFSNDDDGVVGDGGGLFYNTNNGNNNNNNSTESSAVTVIESCNSSSFSGCEPNSSFLEDISGSNLADAHFSSELCVPYDDLAELEWLSHFVEESFSSEDMQKLELISGVKVRSDEPTNSRQPTATRNAAAIFKPDIVSVPAKARSKRSRAVPSNWNNSRLLPLSPTTEPEITATAGPPHPIKKNPPKAATAKKKDSPEVGVSSGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKELLRAQQQQQQHLLLDHHQDMIFDASNGDDYLIHQHMGPDFRQLI 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21889062 21891655 + XM_039030378.1 Bhi04g00868 32477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00868 363 PANTHER GATA TRANSCRIPTION FACTOR 1 363 - -
Bhi04g00868 363 PIRSF Txn_fac_GATA_plant 21 342 IPR016679 GO:0003677|GO:0005634|GO:0045893
Bhi04g00868 363 Gene3D - 246 297 IPR013088 GO:0006355|GO:0008270
Bhi04g00868 363 CDD ZnF_GATA 252 299 IPR000679 GO:0006355|GO:0043565
Bhi04g00868 363 ProSiteProfiles GATA-type zinc finger domain profile. 247 283 IPR000679 GO:0006355|GO:0043565
Bhi04g00868 363 Pfam GATA zinc finger 253 286 IPR000679 GO:0006355|GO:0043565
Bhi04g00868 363 MobiDBLite consensus disorder prediction 193 215 - -
Bhi04g00868 363 MobiDBLite consensus disorder prediction 186 248 - -
Bhi04g00868 363 ProSitePatterns GATA-type zinc finger domain. 253 278 IPR000679 GO:0006355|GO:0043565
Bhi04g00868 363 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 249 311 - -
Bhi04g00868 363 SMART GATA_3 247 297 IPR000679 GO:0006355|GO:0043565
Bhi04g00868 363 PANTHER GATA TRANSCRIPTION FACTOR 1 363 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00868 Bhi-Chr4:21889062 Bhi09g00450 Bhi-Chr9:9668213 1.02E-86 dispersed
Bhi03g00894 Bhi-Chr3:16827000 Bhi04g00868 Bhi-Chr4:21889062 2.28E-36 transposed
Bhi11g01509 Bhi-Chr11:43730845 Bhi04g00868 Bhi-Chr4:21889062 6.12E-39 transposed
Bhi04g00868 Bhi-Chr4:21889062 Bhi09g02574 Bhi-Chr9:69908601 3.21E-125 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
914 PF00320 GATA 1.90E-15 CL0167 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00868 - - csv:101205219 488.419