Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00874 TGCCCATACTTTTTTTCCCAATATCTCGTGAAAGTAAAGAAATTTTGAGTTACTTGAATGTAGGACACTTTGTAGAGAAACTTAAAAAGAAACAGAACTGTTCATGATCCGAGGATATGAATATCCATATTTAAAAAGTAACAATCATGTCAAAACCATTCATGAGTTTGGTAAAGAACCCGAATACAATTACCAGCTTTTGGACTTTGGCTGTGCCGTGTAAGAACAAAGCTCCCCAACCTTTGACTGTCTTAAAGATTATATGTTAACTAAATGGGACCAAAGCATCTACTTTCATATACAGTTCTACATCTTTCCCATCGTCTTTACTTTTCTGGCAAAAACCAATCCTACCAGAATAACCATTAGAAACAAGCATCCAAAAATGTCCAGAATTTCACTGCCATTTCTCACAACCCTGCTCCCTGTTTACCTCTTCTACTTCATCTCCATACAATTCCATGTAACTTCACAAACTGTCGATGTAGACCAGACCATCTTGCTTGATCTCAGGGCACAATGGGGGAATCCACCCTCTCTCTGGTTATGGAACGCCTCGTCCTCACCCTGTGGTTGGCCTGGGATCGTCTGTAGAGATGGTAGGGTCATTGGAATCTCTCTGAGGAACAAGAATATCACTGGGAAAGTCCCAGTTGTCATATGTAACCTGCAAAATCTCAGCGTGGTTGATCTTTCATGGAACTATATCATTGGTGAGTTCCCAGAAGTTCTATACAACTGTTCCAAGCTCAAATATCTCGATCTTTCAGGAAACTATTTTGGGGGTCCAATACCCCAAGACATCGAACGACTTCGAACTCTGCAATACATGGACCTTAGCGCCAACAACTTCTCAGGCAATTTTCCAGCAGCGCTAGGGCGATTGTCAGATTTGAGAACTTTGAACATTTATAGAACTCAATGCAATGGTACATTGCCAGCTGAAATTGGTAACTTGTCCAATCTTGAAATTTTGAGCATGGCGTACAACACTCTGCTTGTCCCATCAACAATACCACAAGAATTCAAGAAACTTAAGAAGTTGAAGTATATGTGGATGACAAAATCCAATTTGATAGGTGAAATCCCAGAAAGCTTTTCGGATCTTTTGAGTCTTGAACACTTGGATTTATCCAGTAACAACTTGATGGGCTCTATTCCTGCTGGGTTGTTCTCTTTGCAGAATTTAAGCAACTTATTTCTCTACCAAAATCAATTGTCCGGGGAGATCCCCAAGTCAATCCGAGCATCAAATTTACTCAATGTTGACCTTTCTGCAAACAATTTACGCGGCACAATCCCTGAGGATTTTGGGAAGTTAAAAAAGTTGCAGGTCTTGAACTTGTTTGCAAATCACTTATCTGGTGAGATTCCAAGAAGTCTAGGCCTAATACCTACACTGAAAGGTTTTCGTGTATTCAACAACAGCTTAACAGGGGGCTTGCCGCAAGAGTTGGGTCTGCACTCAAATTTGGAAGCATTGGAGGTTTCAATGAATAAACTAAGTGGTTCCTTGCCTGAACATCTCTGTAAAAATAGTGTCTTACAGGGAGTAGTTGCTTTTTCCAATAATCTTAGTGGTGAATTGCCAAAAGGGCTTGGAAATTGCAGGACCCTACGTACAGTCCAGCTTTCAAACAACAACTTTTCTGGCGAAATTCCTCCAGGTCTTTGGACTACTTTCAATCTATCAAGCATAATGTTAGATGGAAATTCATTCTCAGGCGAGTTACCAAATAGCTTATCTTGGAATCTCTCAAGACTCACGATAAATAACAACAAATTTTGGGGTCAAATTCCTCCAAATGTGTCTGCTTGGCAAAACTTGATCGTGTTTGAGGCAAGCAACAATCTGCTTTCTGGTATGTTCCCTGATGGATTGACAAGTCTTCCTCATCTTACCACACTCGTATTGAGTGGCAATCGACTCTCGGGCCAACTTCCATCGACAATTGGTTCGTGGAAATCATTGAATACTCTAAATCTCTCAAGAAATGAACTTTCAGGCCATATTCCTGCAGCACTGGGTTCTCTTCCTAACCTCCTTTACCTGGATTTATCAGGTAATAACTTCACAGGTGAAATACCACCTGAAATTGGCCACTTAAGACTGGCTTCCCTCAACTTGTCTTCCAATCAGCTTTCAGGGAAAATCCCAGATGTGTACGAGAATATAGCATATGGAAGAAGTTTCTTGAGCAACCCCAAACTATGTACCACCAGCGGTATACTTGACCTTCCGAGCTGTTACTCTAGACAAAGAGATTCAAAAGATCAGTCCTCTAAGTATCTTCCCCTCATTCTAGCTCTCACTGTTACCTTGCTCATAGTTGCTTTACTTTGGATTTCCCTCCTATATAAAAGTTATTGCAAGAAGGATGAAAGATGCCACCCTGACACATGGAAGCTAACTTCATTCCAGAGATTGAACTTCACAGAAACGAATATCTTGTCAAACTTGACAGAAACTAATCTGATCGGAAGTGGTGGATCTGGCAAAGTGTACTGCATAGACATCAACCATGCTGGTAATTATGTTGCTGTCAAAAGGATTTGGAACAACAATAAGTTAGATCACAAACTTGAGAAAGAATTTCAAGCAGAAGTTCAAATACTAGGCTCAATTCGGCATTCAAATATAGTGAAGTTGCTATGCTGTGTCTGGAATGAGAATTCAAAGCTCTTAGTCTATGAATACATGGAAAATCAGAGCCTAGATAGGTGGCTTCATAAAAAGAAGAAAAGGTTAACAGTTGCTCCAATGGATTTTGTTGATGTCTTAGATTGGCCGAGGAGGTTGCAGATTGCTATTGGAGCTGCACAAGGCCTCAGTTATATGCACCACGATTGCTCTCCACCAATCATTCATCGAGATGTGAAGTCGAGTAACATCTTATTAGACTGCAAGTTCCAGGCAAGGATAGCAGATTTTGGGCTGGCTAAGATGCTGGCCAGGCAGGGAGAGCCCCACACTATGTCTGCAATAGCAGGATCTTTCGGCTACATAGCACCAGAGTATGCCTACACAACAAAAGTCAATGAGAAGATTGATGTCTATAGCTTTGGGGTTGTACTCCTGGAACTTACAACAGGAAGGGAACCTAACTGTGGAGATGAGCACACAAGCCTAGCAGAATGGGCATGGCAGCAATATAGTGAGGGAAAGCTTATTATTGATGCTCTTGATGAGGAAATAAAAAACCCATGCAATTTTGAAGAGATGACTACTCTATTCAAACTTGGTCTAATTTGTACGAGCACGTTACCTGAAATACGACCTTCGATGAAGGAAGTTCTGCATATTCTACGCCAATGCAGCCCTTCAGAAGCTTGTGATAGGAGAAAGCATGCCATTGAATTTGATGCTGTTCCCCTCCTCGGCACCCCTCAATGACATCAACAATATCCTTACTGTTTATGGAAAATTAGTGCCACATTTTGATGGCTGTTTGTATACTCGAGCAGAGGTAGGGGATTGATAAAATTGCTGCAAAGACCACCCCCCCCCCCCAAAAAAAAAAA 3522 41.2 MLTKWDQSIYFHIQFYIFPIVFTFLAKTNPTRITIRNKHPKMSRISLPFLTTLLPVYLFYFISIQFHVTSQTVDVDQTILLDLRAQWGNPPSLWLWNASSSPCGWPGIVCRDGRVIGISLRNKNITGKVPVVICNLQNLSVVDLSWNYIIGEFPEVLYNCSKLKYLDLSGNYFGGPIPQDIERLRTLQYMDLSANNFSGNFPAALGRLSDLRTLNIYRTQCNGTLPAEIGNLSNLEILSMAYNTLLVPSTIPQEFKKLKKLKYMWMTKSNLIGEIPESFSDLLSLEHLDLSSNNLMGSIPAGLFSLQNLSNLFLYQNQLSGEIPKSIRASNLLNVDLSANNLRGTIPEDFGKLKKLQVLNLFANHLSGEIPRSLGLIPTLKGFRVFNNSLTGGLPQELGLHSNLEALEVSMNKLSGSLPEHLCKNSVLQGVVAFSNNLSGELPKGLGNCRTLRTVQLSNNNFSGEIPPGLWTTFNLSSIMLDGNSFSGELPNSLSWNLSRLTINNNKFWGQIPPNVSAWQNLIVFEASNNLLSGMFPDGLTSLPHLTTLVLSGNRLSGQLPSTIGSWKSLNTLNLSRNELSGHIPAALGSLPNLLYLDLSGNNFTGEIPPEIGHLRLASLNLSSNQLSGKIPDVYENIAYGRSFLSNPKLCTTSGILDLPSCYSRQRDSKDQSSKYLPLILALTVTLLIVALLWISLLYKSYCKKDERCHPDTWKLTSFQRLNFTETNILSNLTETNLIGSGGSGKVYCIDINHAGNYVAVKRIWNNNKLDHKLEKEFQAEVQILGSIRHSNIVKLLCCVWNENSKLLVYEYMENQSLDRWLHKKKKRLTVAPMDFVDVLDWPRRLQIAIGAAQGLSYMHHDCSPPIIHRDVKSSNILLDCKFQARIADFGLAKMLARQGEPHTMSAIAGSFGYIAPEYAYTTKVNEKIDVYSFGVVLLELTTGREPNCGDEHTSLAEWAWQQYSEGKLIIDALDEEIKNPCNFEEMTTLFKLGLICTSTLPEIRPSMKEVLHILRQCSPSEACDRRKHAIEFDAVPLLGTPQ 1043
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21995166 21999040 + XM_039028535.1 Bhi04g00874 32483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00874 1043 Gene3D Transferase(Phosphotransferase) domain 1 813 1035 - -
Bhi04g00874 1043 SUPERFAMILY RNI-like 330 636 - -
Bhi04g00874 1043 Pfam Protein kinase domain 735 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g00874 1043 SUPERFAMILY Protein kinase-like (PK-like) 724 1015 IPR011009 -
Bhi04g00874 1043 SUPERFAMILY L domain-like 87 426 - -
Bhi04g00874 1043 ProSitePatterns Serine/Threonine protein kinases active-site signature. 867 879 IPR008271 GO:0004672|GO:0006468
Bhi04g00874 1043 ProSitePatterns Protein kinases ATP-binding region signature. 739 762 IPR017441 GO:0005524
Bhi04g00874 1043 ProSiteProfiles Leucine-rich repeat profile. 284 307 IPR001611 GO:0005515
Bhi04g00874 1043 Pfam Leucine Rich Repeat 284 303 IPR001611 GO:0005515
Bhi04g00874 1043 Pfam Leucine Rich Repeat 162 184 IPR001611 GO:0005515
Bhi04g00874 1043 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 56 1033 - -
Bhi04g00874 1043 Pfam Leucine rich repeat 562 604 IPR001611 GO:0005515
Bhi04g00874 1043 Pfam Leucine rich repeat 497 556 IPR001611 GO:0005515
Bhi04g00874 1043 ProSiteProfiles Protein kinase domain profile. 733 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g00874 1043 Gene3D Ribonuclease Inhibitor 73 248 IPR032675 -
Bhi04g00874 1043 PANTHER KINASE FAMILY WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 56 1033 - -
Bhi04g00874 1043 Gene3D Ribonuclease Inhibitor 249 380 IPR032675 -
Bhi04g00874 1043 Gene3D Ribonuclease Inhibitor 381 666 IPR032675 -
Bhi04g00874 1043 SMART serkin_6 733 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g00874 1043 SMART LRR_typ_2 136 160 IPR003591 -
Bhi04g00874 1043 SMART LRR_typ_2 591 615 IPR003591 -
Bhi04g00874 1043 SMART LRR_typ_2 543 567 IPR003591 -
Bhi04g00874 1043 SMART LRR_typ_2 232 257 IPR003591 -
Bhi04g00874 1043 SMART LRR_typ_2 353 377 IPR003591 -
Bhi04g00874 1043 SMART LRR_typ_2 282 306 IPR003591 -
Bhi04g00874 1043 Gene3D Phosphorylase Kinase; domain 1 716 812 - -
Bhi04g00874 1043 Pfam Leucine rich repeat N-terminal domain 76 110 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00874 Bhi-Chr4:21995166 Bhi08g02260 Bhi-Chr8:64514596 0 dispersed
Bhi02g01956 Bhi-Chr2:52850225 Bhi04g00874 Bhi-Chr4:21995166 0 transposed
Bhi03g01254 Bhi-Chr3:25706112 Bhi04g00874 Bhi-Chr4:21995166 3.29E-66 transposed
Bhi04g00874 Bhi-Chr4:21995166 Bhi09g02571 Bhi-Chr9:69778815 1.06E-138 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87671 PF00069 Pkinase 5.50E-46 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00874 K00924 - csv:101219431 1813.51