Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00924 TTTTCGTCGGTTTTTAAATTTACATCCAACGATTATTAGGAGGAGGAAACGAATAACCTTTTTTCATACTTTACCATATCTCTCTTATAAAGTCTGAATTTTATGTATGGCGGTGGGCCCCATCTCCACCTCCCAAAACAGCGGCGCCACTGCTCTTTTTCACTTTATTTTCAACCTCACCCACCTTCCTCCACCACCCTATCTCATTTTTAATTTTCTATAAACAAATTCCCATTTCTTCCCTTCCTCTATTCCCTTCTCTCTTTCCCTTTTCTTTTATTTCATTTCCAAATTTCTCCCAAAAAAATTAAAAAACCCATTACTTTAAATTAAGAAAATCCTTTAATTGGGATTAATTTGAAGGGAAAAAAAGAAAGAATGAAAGGCGATTTTGCTCATCCCAAGAGCAAAACTTCCAATATGTTATCAAAATTCCATCTCTCAACCCACCCTTTCTCCAACCATCCTCCGCCGCAACAACCCGCCGACGAGCCCACCGCCGCCGTGCCTTCCGCCTTTAAACACCACACGGAACTAACCTCCACCGCCGATGGTTCCACCATCGAGGTGGTCCGTCGGCCGAGGGGTCGCCCACCGGGTTCCAAAAATAAACCTAAACCGCCTCTTGTTATAACCCGGGAACCCGAACCGGCTATGCGGCCGTACGTTCTAGAAGTCCCTGGGGGAAACGACGTCGTTGAAGCTATTTCAAGATTTTGCCGTCGCAAAAATTTGGGCCTTTGTGTTCTCAACGGTTCCGGTACCGTTGCTAATGTTTCTCTCCGTCAACCCTCCGCTACCCCTGGCGCCACCGTTACTTTTCACGGTCGTTTTGAGATTCTCTCCATTTCCGCTACCGTCTTCCCTCAAACCACGCCGTTACCTTTACCTAATGGTTTCACTATCTCCCTCGCCGGACCTCAGGGTCAAATCGTTGGCGGCTTGGTCGCCGGCGCTTTAATTTCCGCCGGTACTGTTTTTATTGTTGCCTCGTCCTTTAATAATCCGCTGTACCACCGGCTTCCGGATGAGGAAGAGATTAAGAATTTGGGATCCGGCGGCGGCAGTGGCGGTGGCGAAGTTCATTCCCCACACGTCTCCGGCGGTGGAGATAGTAGCGGGCACGGGCACGGGCACGGGCACGGGCAGCTTGTAGAATCGTGTGGAATGGCTATGTACAGTTGCCACGCGCCGTCTGACGTAATTTGGGCGCCAACGGCGAGACAACCGCCGCCGCCGCCGTACTAATCCATAACTTTTCATTTTGTTTTCTGCTGATTTCTTTTTCCTATAAATCCTTTTTTTCCCCATTAATTTTCCATTGCTCTTCTGTTAAATTTGTAGGGTTTGTGGTCTGTTCTAGAATTTTTCTTTGATTTGAAATGACTTGAAAAGGAAATGAACTGATTTTTTTTTTTTTTTTGCAAA 1428 46.57 MKGDFAHPKSKTSNMLSKFHLSTHPFSNHPPPQQPADEPTAAVPSAFKHHTELTSTADGSTIEVVRRPRGRPPGSKNKPKPPLVITREPEPAMRPYVLEVPGGNDVVEAISRFCRRKNLGLCVLNGSGTVANVSLRQPSATPGATVTFHGRFEILSISATVFPQTTPLPLPNGFTISLAGPQGQIVGGLVAGALISAGTVFIVASSFNNPLYHRLPDEEEIKNLGSGGGSGGGEVHSPHVSGGGDSSGHGHGHGHGQLVESCGMAMYSCHAPSDVIWAPTARQPPPPPY 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23669358 23670785 - XM_039029527.1 Bhi04g00924 32533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00924 289 SUPERFAMILY AF0104/ALDC/Ptd012-like 92 219 - -
Bhi04g00924 289 Pfam Plants and Prokaryotes Conserved (PCC) domain 94 209 IPR005175 -
Bhi04g00924 289 MobiDBLite consensus disorder prediction 10 27 - -
Bhi04g00924 289 CDD DUF296 94 207 IPR005175 -
Bhi04g00924 289 Gene3D - 93 225 - -
Bhi04g00924 289 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 34 288 IPR014476 GO:0003680
Bhi04g00924 289 MobiDBLite consensus disorder prediction 1 86 - -
Bhi04g00924 289 ProSiteProfiles PPC domain profile profile. 90 228 IPR005175 -
Bhi04g00924 289 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 34 288 - -
Bhi04g00924 289 MobiDBLite consensus disorder prediction 222 255 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g01453 Bhi-Chr2:39298549 Bhi04g00924 Bhi-Chr4:23669358 3.12E-49 dispersed
Bhi04g00924 Bhi-Chr4:23669358 Bhi09g02495 Bhi-Chr9:67484446 6.24E-102 dispersed
Bhi04g00924 Bhi-Chr4:23669358 Bhi01g00104 Bhi-Chr1:2168956 1.87E-50 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00924 - - bhj:120075835 506.523