Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00939 ACACTGTAAAAATTTATAATAATTTCTATCCAACGCCGCTGCATTTTGATTGGTCCACGCTGGCATTTGAACCCTTACGCCCCTACGTCGACCGGGAATTTCTTCCATTTGGACCTTCTTCTTGCGTCTACGCTGCCGGTGCTAGGTTTCTATTTAGAGCAAAGTCGATAACCGAGATTTCCCTTACTTTTCTCTTCTTTTGATTCTCGAGGTACTAGACATTCTATTGTAAATTGCTGAGCTCTGAACCAAGAAATCTCACTACATTATTGAGCCCCTTTTACGGGGTTCAGTGTACAAACTAACTTAATCTGCATTGGGATACTATCCTTGCACATCACTGTTTTCAGCTCATTCAACGATGGTTCATCCTGGTTCAACCCAATTTTCACATAAATTGGGGATTCAAAGTGTTCATGGATGCAACAAGCTACATATTAGTGTCAAGGGAAAGACTCGTCTACATCTTGTTACTATAGTTCCTACATCACACGGTCTGAGGCACGATCCTGGAAGTCTTCAGCTCTTACAGAGTGTAAGACGCCCGATGTATCCTGTGTCTTCCAGAGCAAATGTTTTTGTGTGTCGATCTGTTCTGGAATCAGGTGGTGGAGCTGGGACTGCTGTTCTAAAATCTGCAGCTGTGGTTTTGACAAGGTCTTATGATGCTTTACGTGGCAGTCCTCTGTTACTTAAATTAATTCCAGCAGCTTGTGTCATTGCTTTTGCTGCTTGGGGTGTTGGACCTCTTATGCGTTTGGGGAGGATTCTATTTCTTCATGAGCCAGATGGCAGTTGGAAGAAAAGTAGTACATACTATGTTACGACTTCTTATGTTCAGCCTTTACTGCTTTGGACTGGAGCTACGCTGATTTGCAGGGCATTGGATCCAGTAGTTTTACCTTCAGTAGCCAGTCAGGCTGTCAAACAACGACTTCTGAATTTTGTTAGATCTTTATCTACTGTTCTCGCATTTGCCTATTGTATATCCAGCTTGATTCAACAAGTACAAAAATTTGCTTCTGAATCAAATGACTCGAGTGATGCAAGAAATATGGGCTTTGATTTTGCCGGGAAAGCTGTTTACACTGCAGTCTGGATTGCTGCTCTTTCATTGTTCATGGAGTTGCTCGGCTTTTCAACCCAGAAGTGGCTCACAGCTGGGGGTCTTGGAACTGTATTGCTTACCCTTGCTGGTCGTGAGATATTTACCAACTTCCTTTCAAGTGTCATGATTCATGCAACACGACCATTTGTGGTAAATGAATGGATTCAAACAAAGATCGATGGATACGAAGTATCAGGAACGGTTGAGCACGTTGGTTGGTGGTCGCCAACCATCATCCGAGGCGATGATCGTGAAGCGGTCCATATTCCAAATCACAAATTTACTGTTAGTATTGTGAGGAATCTTACCCAGAAGACTCATTGGCGTATCAAGACTCATCTTGCCATCAGCCACTTGGATGTTAATAAGATTAATTATATTGTAGCTGATATGCGCAAAGTTTTGTCCAAGAATCCTCAAGTTGAACAGCAAAGGTTACACCGCAGAATTTTTTTGGATAATGTCAATCCTGAAAACCAGGCTCTTATGATTATGGTTTCTTGCTTTGTGAAAACTTCTCGTTTTGAAGAATACCTGTGTGTCAAGGAGGCAATTCTCTTGGATCTCCTCAGGGTTATCAGCCATCATAGGGCCCGGCTCGCCACACCTATTCGCACTGTTCAGAAAATATATGGTGAGGCTGACTTGGAGAATGTACCATTTTCCGACACCATGTATTCTCGTTCGGGAGCTACTAACCGTCATCTGCTTCTTATCGAGCCATCTTATAAAGTCAATGGTGATGATAAAACCAAAGTCTCTAGTCGTTCCACTCGTCCATCAAACGAAGAAAAGGAAGCCAAACAAGAGGCAGTCTCGACGTCAGGGACAAAAGCCCCCGACACAACTGGATCAACATCAAATCTTGATATGAAAACAGACGATAAAAAATCGATTTCTCCATCTGGTACTACACCTAAGCCTTCAACAGGATCGATATCCAACACACAGACACCAAATCTATCAACCAGCATTTCAGAACAAAGCAGCGCAGAAAAGCCAATAACAAGCAATGAGATAAAAGGACTGAATTCCAAGGACAATATGACACGAGGGACTCCGCCCAAAAGATCACCCTCAGCTTCTGGTCCCATCAGCGAGAAAGCTGATATTCCTTCCTCAAGCTCACAGAATAAGCTAGACAGCGAGAAGCCCTCTGCATCGCCATCAGTAGCAAGGCCACCATTGGAGGAGAATATTGTTCTGGGAGTTGCTTTGGAAGGCTCCAAAAGAACTCTTCCGATTGATGAAGATTTGGATTCAAAAGAAGTTTCTACGCAGAGGAATGGGTGTGAGTTTCCTACCAACAGCAAGGATATGAAAGATGGCCAAATGCCTGCAGTTCCAGGTGCGACAAAAAATGATTGATGAGTAGGCATCTCGAGGGTTGCTTTCTCCCAATTATTACCCCGATTTTTGAAGCGATGCGAAAATGAAATGCAGAGCTGCATTTTTAAGCAAGCATTTTGCAGGCTCGCCAGTGTAAAAAATTCATATCTTGTTCCAAAGGCAATGTTGGCTACGCTAACTTTCCCCCCAGAAAAGAAAATAGGAAAAAAAAAAAAGGATAATTACGTTATCATTCTTATTGTTAAATGATTTCTCAGGATCAGTCTGTCATTAGTGAGTTGAATATACATTAGAACTGGGATAGATTTAGCAAATTGAGCATAATTTAACTGGTTTAGACATGTACTTTGAAGAAGGTTGACAGATGAATAACGTGACACCTGTAAAGGTCACATGGATGTAAGGGTCAAAGTAAAACATTACATTTTTCTTGGGCTAA 2897 42.15 MVHPGSTQFSHKLGIQSVHGCNKLHISVKGKTRLHLVTIVPTSHGLRHDPGSLQLLQSVRRPMYPVSSRANVFVCRSVLESGGGAGTAVLKSAAVVLTRSYDALRGSPLLLKLIPAACVIAFAAWGVGPLMRLGRILFLHEPDGSWKKSSTYYVTTSYVQPLLLWTGATLICRALDPVVLPSVASQAVKQRLLNFVRSLSTVLAFAYCISSLIQQVQKFASESNDSSDARNMGFDFAGKAVYTAVWIAALSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIDGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVSIVRNLTQKTHWRIKTHLAISHLDVNKINYIVADMRKVLSKNPQVEQQRLHRRIFLDNVNPENQALMIMVSCFVKTSRFEEYLCVKEAILLDLLRVISHHRARLATPIRTVQKIYGEADLENVPFSDTMYSRSGATNRHLLLIEPSYKVNGDDKTKVSSRSTRPSNEEKEAKQEAVSTSGTKAPDTTGSTSNLDMKTDDKKSISPSGTTPKPSTGSISNTQTPNLSTSISEQSSAEKPITSNEIKGLNSKDNMTRGTPPKRSPSASGPISEKADIPSSSSQNKLDSEKPSASPSVARPPLEENIVLGVALEGSKRTLPIDEDLDSKEVSTQRNGCEFPTNSKDMKDGQMPAVPGATKND 704
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23892852 23899848 - XM_039030869.1 Bhi04g00939 32548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00939 704 MobiDBLite consensus disorder prediction 660 674 - -
Bhi04g00939 704 MobiDBLite consensus disorder prediction 616 634 - -
Bhi04g00939 704 Gene3D - 194 296 - -
Bhi04g00939 704 MobiDBLite consensus disorder prediction 496 704 - -
Bhi04g00939 704 Pfam Mechanosensitive ion channel 239 446 IPR006685 GO:0016020|GO:0055085
Bhi04g00939 704 MobiDBLite consensus disorder prediction 521 538 - -
Bhi04g00939 704 SUPERFAMILY Sm-like ribonucleoproteins 282 352 IPR010920 -
Bhi04g00939 704 Gene3D - 298 353 IPR023408 -
Bhi04g00939 704 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 1 696 - -
Bhi04g00939 704 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 696 IPR045042 -
Bhi04g00939 704 MobiDBLite consensus disorder prediction 547 609 - -
Bhi04g00939 704 MobiDBLite consensus disorder prediction 496 520 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00939 Bhi-Chr4:23892852 Bhi11g00900 Bhi-Chr11:27799182 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00939 K22047 - csv:101213477 1268.83