Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00947 CTTACAGCTCGGCAATGGCAGGCTATGAGGTTGGGTTAGTTGACATCTTTGAACACCCACCACTACTATCCTACTTCGCATTTATTATTCCCAATTTCCCATTTTTCCTTCAATGCCGACGAAATTACCAACGCCATCATTCTAATCGCTAAACCTCCTCTTTCTCTGTGTTCTTGCTTCTACAGACTTGGAATTTGGGGTTCATTCTTTTATGGGTTTTAATGGATTTCCCATTCTTCACATACCCTTCCTTTTTTATTTTCCAATTCCTCGCGGTTTGTTGGCCGCTACCAGCTTTTGGGATTGCTTGTTCCCCAGTTTCTAACATTTCTAAACCATCTTTCTTCATCTTCACCCTTTCAGATCGCTTCTAATTTTTTAATCTTCTTCTTGGGTTCTTCTCGTTTATCTTGCCTCTCTCATTCTCTGGAAAAAGGGTGATGGAAACCACCGGATTTGGTGATTGTTTGTCGGTTATTATATGGCTCAATTTGCTTCTCCTGAGGTTCAGACCCTGCGCCGCTGGTTTTCAGAGCGTTGGGCAGATTTCTCCAGGGCTTCAAGGAACTCAAATGAATTGGGTCGATCATGATGGGGTGTTTCTTCAATCCAATAACTCTGAGTTTGGGTTTGGATTCACTAATCCACAGGAAGTAACGCAGTATTTTCTAGCGATTATTCACTTGAGTAGCAGGAGTATCGTCTGGACTGCGAATCAGGCCTCTCCGGTTACGACTTCGGATAAATTCGTGTTCGATGAGAAAGGTAATGTAGTTTTATACCATGAAAGCAATGTGGTTTGGTCTACAAACACTGCGAATAAAGGAGTCTCTGCTCTTGCGTTGATGGATTCGGGAAATTTGGCTTTGCTTGGGAGTGATAATGCAGTGGTTTGGGAAAGTTTTGGCCATCCGACTGATACCCTTTTGTCGAATCAGGGTTTTGTTGAAGGAATGAGACTTGTAAGTAAGCCGGATTCGAATAATTTGACGTATTTTCTGGAATTGAAATCTGGGGATATGGTTTTGTCTTCAGGATTCAAAACTCCACAACCGTATTGGTCAATGAGCAGAGAGAATCGCAAAACGATTAACAAAGATGGTGGGTCTGTAGTCTCTGCAATTCTCACAGCAAACTCTTGGAATTTCCATGGTGAAAACGATGTATTACTCTGGCAATTTGCCTTCTCAACCAATACTGACGCAAACGCTACATGGATTGCGGTTCTGGGTAATGATGGATTTATTTCCTTTTACAAGCTTCAAAATGGTGGGTCTGGTGATGCTTCATCCATTCGAATTCCTGAAGATCCTTGTGGAACACCAGAGCCATGTGGGTCCAATTTTATCTGTTACAGTGAAAAAAAGTGTCTCTGTCCTTCAATTCTTGGCTCTCGTCCAAATTGCCAAACTGGGATTACTTCGCCGTGTGACCAATCTGGTGAACCTGCAGAGCTTGTGGAGTCTCAAGATAAGATGGGTTATTTTGCACTCCAATTCATGCAGCCCTCTTCGAAAACAGATTTGGAGACTTGCAAATCCTCTTGCAGTAGTAACTGCTCTTGTATTGCTCTGTTTTTCCAAGCGAGTACAGGGGGCTGTTTCCTGTTTGATGAGATAGGTGGGTTTCTGAACTCCAAGAACTCCGAATTCGTTTCGTACATAAAACTGTTGAAAAATGGAGAAAACAGTGAAAACGATGGCGGAAATGGAAGTGGTGGAAAGAAGCCAACCGCTGCGATTCTGGGTATTGCCTTTTCCACTGTGATTGTCATTTGTATTCTGATTTACGTCGGAATTCGATACGTTAGAAAGAAGAAGGAATCTCCAGAACCTCCTCAAGAGAGTTCAGAAGAAGAGAATTTTTTGGAGGGACTTTCGGGAGCTCCAATTCGTTACAGTTACAAGGATCTTCAAACAGCGACGGATAATTTCTCAGTGAAACTCGGACAAGGTGGGTTCGGTTCAGTTTATAGAGGATTTCTACCAGATGGAACTCGTTTGGCCGTGAAGAAACTAGAGGGAATTGGGCAAGGAAAAAAGGAATTCAGAGCTGAAGTGGGCATAATCGGCAGCATCCATCACATCCACTTAGTCAGATTAAAGGGATTTTGTGCAGAAGGAACCCATCGTCTTCTTGCTTACGAGTTCATGGCCAATGGTTCACTAGACAAATGGATTTTCAAGAAAAACAGAGCAGATTTGTCGCTAGATTGGGATACGAGATTCAACATAGCGTTAGGAACCGCAAAAGGTTTAGCATATCTTCACGAAGACTGTGATGCTAAAATCGTTCACTGTGACATAAAGCCGGAAAATGTACTATTAGACGACAATTTCCAAGCCAAAGTCTCGGATTTCGGGCTAGCAAAGCTAATGAACCGGGAACAGAGCCATGTGTTCACCACACTGCGAGGAACGAGAGGCTATCTCGCTCCAGAATGGATCACAAACTACGCCATTTCAGAGAAGAGCGACGTGTACAGCTACGGAATGGTGCTGCTAGAAATCATTGGCGGAAGAAAGAACTACGACCCAACAGAGAGCTCAGAGAAATCCCATTTCCCAACATATGCTTTCAAGATGATGGAAGAAGGAAGAATGAAAGCCATTCTCGATGCTAAGTTGAACATAAAGGATAACGACGAGAGAATCTCGATAGCCATCAAAGTGGCGCTCTGGTGCGTGCAGGAGGATATGCAACAAAGGCCGTCCATGGCTAAAGTGGTGCAAATGCTTGAAGGGGTCAGCACTGTGCCGCCGCCACCGACTTGCTCGCCGTTGGGTTCCCGGCTGTTTGCTGCAGGGTTTTTGAAATCGAGCAGCGAGGAATGGACTTCATCGGGGCCATCCGATTGCAATAGCGATGCGTATCTTTCTTCAGTGCAGCTATCTGGGCCAAGATAGATAGCATTTGTATACAACTTGCACATTTTTTAGGAGTTTAGGACACTGTAAATTTTCAGATTGCTGCAGTTTTGTGAACCGGCTTTTGTGTACACTAATTTCTCGACAGTTTTAAGAACATTGTTCAACTTTAATTTATAGTTAGAATGTGACCATCTCCAGTTATTTATGA 3078 43.4 METTGFGDCLSVIIWLNLLLLRFRPCAAGFQSVGQISPGLQGTQMNWVDHDGVFLQSNNSEFGFGFTNPQEVTQYFLAIIHLSSRSIVWTANQASPVTTSDKFVFDEKGNVVLYHESNVVWSTNTANKGVSALALMDSGNLALLGSDNAVVWESFGHPTDTLLSNQGFVEGMRLVSKPDSNNLTYFLELKSGDMVLSSGFKTPQPYWSMSRENRKTINKDGGSVVSAILTANSWNFHGENDVLLWQFAFSTNTDANATWIAVLGNDGFISFYKLQNGGSGDASSIRIPEDPCGTPEPCGSNFICYSEKKCLCPSILGSRPNCQTGITSPCDQSGEPAELVESQDKMGYFALQFMQPSSKTDLETCKSSCSSNCSCIALFFQASTGGCFLFDEIGGFLNSKNSEFVSYIKLLKNGENSENDGGNGSGGKKPTAAILGIAFSTVIVICILIYVGIRYVRKKKESPEPPQESSEEENFLEGLSGAPIRYSYKDLQTATDNFSVKLGQGGFGSVYRGFLPDGTRLAVKKLEGIGQGKKEFRAEVGIIGSIHHIHLVRLKGFCAEGTHRLLAYEFMANGSLDKWIFKKNRADLSLDWDTRFNIALGTAKGLAYLHEDCDAKIVHCDIKPENVLLDDNFQAKVSDFGLAKLMNREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDPTESSEKSHFPTYAFKMMEEGRMKAILDAKLNIKDNDERISIAIKVALWCVQEDMQQRPSMAKVVQMLEGVSTVPPPPTCSPLGSRLFAAGFLKSSSEEWTSSGPSDCNSDAYLSSVQLSGPR 821
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24104491 24107568 + XM_039030123.1 Bhi04g00947 32556

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00947 821 PIRSF SRK 9 817 IPR024171 GO:0004674
Bhi04g00947 821 ProSiteProfiles Protein kinase domain profile. 496 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g00947 821 Gene3D - 48 157 IPR036426 -
Bhi04g00947 821 MobiDBLite consensus disorder prediction 795 821 - -
Bhi04g00947 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 210 IPR036426 -
Bhi04g00947 821 Gene3D Phosphorylase Kinase; domain 1 460 570 - -
Bhi04g00947 821 SMART blect_4 46 158 IPR001480 -
Bhi04g00947 821 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 11 821 - -
Bhi04g00947 821 Pfam Protein kinase domain 500 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g00947 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Bhi04g00947 821 Gene3D Transferase(Phosphotransferase) domain 1 571 772 - -
Bhi04g00947 821 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 11 821 - -
Bhi04g00947 821 SMART serkin_6 496 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g00947 821 CDD B_lectin 51 158 IPR001480 -
Bhi04g00947 821 Pfam D-mannose binding lectin 87 166 IPR001480 -
Bhi04g00947 821 ProSiteProfiles Bulb-type lectin domain profile. 40 156 IPR001480 -
Bhi04g00947 821 ProSitePatterns Protein kinases ATP-binding region signature. 502 525 IPR017441 GO:0005524
Bhi04g00947 821 SUPERFAMILY Protein kinase-like (PK-like) 480 768 IPR011009 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00947 - - - csv:101216153 1479.15
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bhi04g00947 Bhi09g02238 CCT
Bhi04g00947 Bhi09g02238 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03541 Bhi-Chr1:90250508 Bhi04g00947 Bhi-Chr4:24104491 0 dispersed
Bhi04g00947 Bhi-Chr4:24104491 Bhi09g02238 Bhi-Chr9:62967435 0 dispersed
Bhi02g01038 Bhi-Chr2:23390384 Bhi04g00947 Bhi-Chr4:24104491 2.64E-103 transposed
Bhi04g00947 Bhi-Chr4:24104491 Bhi09g02237 Bhi-Chr9:62967434 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g485 Blo01g01390 . Bda01g00747 . Bpe02g01248 Bpe02g00561 . . . Cmo12g00289 . . Car09g00401 Car12g00321 . Cpe07g00298 Cpe06g00340 Bhi04g00947 . . . . . Lcy13g1792 Cla05g01737 . . . . . . Cone4ag1783 Cone7ag1698 . . Lsi04g02129 Csa03g04335 Chy04g00367 Cme03g01614 . Blo18g00024 Bda01g01002 Bda13g01262 Bpe14g00581 . Bma01g01276 Bma02g00024 . . Cmo09g00467 Cma09g00458 Cma12g00340 . . . . Bhi09g02238 . . . . Mch11g0555 . Cla08g01336 . . . . . . Lsi08g01207 . Chy03g01118 Cme04g00409
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001479 3 3 3 4 3 2 2 2 2 2 2 2 2 2 1 2 2 7 2 2 2 2 2 2 1 2 1 2 2 2 68
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87674 PF00069 Pkinase 1.50E-50 CL0016 Bhi PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi04g00947 Bhi_Chr04 FPKM 7.594216 7.515624 10.205081 8.172622 7.993521 7.501747 7.296881 14.656221 13.830067 14.854981