Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00959 TCTGAGTTTTCCTGTTTGTTCGACGCATTTTCGGGGAAAAGCAAGGATCCTTTTCTCTTTCAACTCTGTTGCAAGATACAAATGCCGCGCTTGCTTCATGGGACGCTTCATGCTGATATATATAGAATCGACAGACTTCAAACTGGATTTCCTATTTTCTGTGGGAAGTCGACCAAAAAGTTTCTTGCCGGAGTGAAGAGACGCATCCTTTGCCGTCCCGAGATTGTTGGATCTCAAATGTATGCAACAGTCGATCTTGATAAGGCCAGAGTTGGCAGGACGAGAATAGTGGATCAGCCATACAGTCCTCAGTGGAACGATCATTTTCGTATATATTGTGCTCATACAGTGTCACACATTATATTCACAGTTAAAGATGGAGATGTAATTGGTGCAACATTAATTGGAAGAGCTTATGTGCCTGTTGAGGATATCATTAAGGGATTTGTATATGAGAAATGGGTTGAAATATTAGATGAAGACGGTAAGCCTTTGTATGGTCGTTCTAGAATCCATGTAAAGTTGCAATTTTCAAGTGTTAATGAAGACAGGAACTGGTCCCGAGGAATCCCAGATCCAAAGTTCAGTGGGATACCTTTCACATTCTTCAACCAAAGATGGGGTTGCAAAGTTTCTCTTTACCAGGATGCTCATGTTTTAAACAACTTCCTCCCTCGAGTTGGTTTGTCAGGAGGGAATTTTCATGAAGTACACAGGTGTTGGGAGGACATTTTTGATGCAATTAGCAATGCAAGACACTTGATTTACATAACTGGTTGGTCTGTGCATACCGGAATAACTTTGATAAGAGACCGGGAAAGAAGACAGACAGGAGAGGATATTACTCTGGGACAACTGCTAAAGAAGAAGGCCGAAGAAGGTGTGACTGTTTTGCTTCTTGTTTGGGATGACAGAACTTCCGTTGAAGAGTTCAAAAGAGATGGTTTGATGGCAACCCATGATCAAGAAACTGCAGAATACTTCAGGAACTCGAAGGTACATTGCGCTCTGTGTCCACGGAATCCTGATGTTGGTAGAAGTATAATTCAGGGTTTTGAGACGGCTACCATGTTTACTCATCACCAAAAGACAGTTGTGCTTGATAGTGAAATAGCTGGTGGAGGAACAGAGAAAAGAAGGATCATAAGTTTTGTTGGTGGCATTGATCTGTGTGATGGGAGATATGATACACCAAAGCACCCTTTGTTTTCAACTCTAGATTCAATCCACTATAGCGATTTTCACCAGCCTAGCATTTCAGGCTCTTCAATTAGGAAAGGTGGTCCTCGGGAACCATGGCATGACATCCATTGCCGCCTAGAAGGGCCTGTTGCTTGGGATATTCTGTACAATTTTGAACAAAGATGGCGAAAGCAAGTTGGAAACAACTTGTTAATTCCAATGCAAAAGCTTGAAGAAACCATTACCCGCCCAGTAATGGTTCTACCAGCAGACGACCCCGACTCCTGGAATGTTCAAATATTTCGGTCTATTGATGGTGGTGCTGTAGATGGCTTTCCAGATACACCTGAAGATGCATCCAGAGTAGGCCTTGTAAGTGGGAAGGATAATGTTATAGATAGGAGTATTCAAGATGCTTATATTAATGCTATTCGCAGAGCGAAAAATTTCATATATATTGAGAATCAATATTTCCTTGGAAGCTCTTATGGTTGGAAATCAAATGGTATAAGGGTAGAAGAAATCAATGCTTTGCATCTTATTCCAAAGGAGATCTCGTTGAAGATTGTGAGCAAGATTGAAGCTGGAGAGAGATTTACAGCATATATTGTCATTCCAATGTGGCCAGAAGGCATTCCTGAGAGTGCTTCAGTTCAAGCAATATTAGATTGGCAAAGGAGAACCTTAGACATGATGTACACAGATATAGCTCAAGCCCTTCGGAAGAAGGGTCTCGATGCAAATCCTAGAGATTACTTGACATTCTTCTGCCTTGGCAATCGAGAGAAGACGAGAAGTGGAGAATATGTACCACCAGAGAAACCAGAGCCCAATTCAGATTATGCTCGGGCTCAAGAGCACCGACGTTTTATGATCTATGTTCATTCAAAAATGATGATAGTTGACGATGAATACATAATTATTGGGTCTGCCAACATCAACCAGAGGTCAATGGACGGAGGAAGAGACTCCGAGATTGCAATGGGGGCTTTTCAACCTCATTATTTGGCATCTGGTGAGCCTGCAAGAGGTCAAATCTATGGCTTCAGAGTGGCTCTATGGTACGAGCATCTTGGTCTGTTTGACAAAGCCTTCCATAACCCAGAGAGTGAAGAATGCATCCAATTCGTAAACAAGCTCGCTCTAGAGAACTGGCAATTTTACTCAGACGATACCTTTGATGGCGATCTTCCTGGCCATCTGCTTTCCTATCCCATCCAAGTAGGCTCAAACGGATCGGTTTCGGCGCTGCCAAAGTTTGAATTTTTCCCTGACACGAAGGCTCGTGTTCTTGGGCAACTAGCCGAGTATCTACCTCCAATCCTTACCACTTGACGACATGTCGTGTGAGGAGGATTATTTGCGTGATTTGATCATCTCCTCGTACCTAGGATTGGTTGGTCAAAAGATGTAAATATGTTGTGTCGGTAAAGATTTGATCTTTAGATGACTTGATTGATGTTGAATTGTTTCATTATTCTCAGAACAAAAAGGGAAAGTTAGAAATTGGAACAATACAGAAGACTAGAAGAGAAAAGAATAGTTTTTATAGACTTAAAATATTGGAATATATTCTCAAATTTGACC 2769 41.71 MPRLLHGTLHADIYRIDRLQTGFPIFCGKSTKKFLAGVKRRILCRPEIVGSQMYATVDLDKARVGRTRIVDQPYSPQWNDHFRIYCAHTVSHIIFTVKDGDVIGATLIGRAYVPVEDIIKGFVYEKWVEILDEDGKPLYGRSRIHVKLQFSSVNEDRNWSRGIPDPKFSGIPFTFFNQRWGCKVSLYQDAHVLNNFLPRVGLSGGNFHEVHRCWEDIFDAISNARHLIYITGWSVHTGITLIRDRERRQTGEDITLGQLLKKKAEEGVTVLLLVWDDRTSVEEFKRDGLMATHDQETAEYFRNSKVHCALCPRNPDVGRSIIQGFETATMFTHHQKTVVLDSEIAGGGTEKRRIISFVGGIDLCDGRYDTPKHPLFSTLDSIHYSDFHQPSISGSSIRKGGPREPWHDIHCRLEGPVAWDILYNFEQRWRKQVGNNLLIPMQKLEETITRPVMVLPADDPDSWNVQIFRSIDGGAVDGFPDTPEDASRVGLVSGKDNVIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWKSNGIRVEEINALHLIPKEISLKIVSKIEAGERFTAYIVIPMWPEGIPESASVQAILDWQRRTLDMMYTDIAQALRKKGLDANPRDYLTFFCLGNREKTRSGEYVPPEKPEPNSDYARAQEHRRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDSEIAMGAFQPHYLASGEPARGQIYGFRVALWYEHLGLFDKAFHNPESEECIQFVNKLALENWQFYSDDTFDGDLPGHLLSYPIQVGSNGSVSALPKFEFFPDTKARVLGQLAEYLPPILTT 811
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24175834 24180590 - XM_039029413.1 Bhi04g00959 32568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00959 811 SMART C2_3c 8 127 IPR000008 -
Bhi04g00959 811 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 657 684 IPR001736 GO:0003824
Bhi04g00959 811 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 50 153 IPR035892 -
Bhi04g00959 811 Pfam C2 domain 51 130 IPR000008 -
Bhi04g00959 811 Gene3D C2 domain 40 161 IPR035892 -
Bhi04g00959 811 ProSiteProfiles C2 domain profile. 1 128 IPR000008 -
Bhi04g00959 811 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 329 367 IPR001736 GO:0003824
Bhi04g00959 811 Gene3D Endonuclease Chain A 479 701 - -
Bhi04g00959 811 SMART pld_4 657 684 IPR001736 GO:0003824
Bhi04g00959 811 SMART pld_4 329 367 IPR001736 GO:0003824
Bhi04g00959 811 CDD C2_plant_PLD 1 150 - -
Bhi04g00959 811 PIRSF PLD_plant 1 811 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bhi04g00959 811 Pfam Phospholipase D Active site motif 658 684 IPR001736 GO:0003824
Bhi04g00959 811 Pfam Phospholipase D Active site motif 329 367 IPR001736 GO:0003824
Bhi04g00959 811 Gene3D Endonuclease Chain A 205 453 - -
Bhi04g00959 811 PANTHER PHOSPHOLIPASE D ALPHA 3 3 811 - -
Bhi04g00959 811 PANTHER PHOSPHOLIPASE D 3 811 IPR015679 -
Bhi04g00959 811 Pfam Phospholipase D C terminal 729 800 IPR024632 -
Bhi04g00959 811 SUPERFAMILY Phospholipase D/nuclease 155 444 - -
Bhi04g00959 811 SUPERFAMILY Phospholipase D/nuclease 484 740 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03327 Bhi-Chr1:83793976 Bhi04g00959 Bhi-Chr4:24175834 0 dispersed
Bhi04g00959 Bhi-Chr4:24175834 Bhi09g00029 Bhi-Chr9:528873 0 dispersed
Bhi04g00959 Bhi-Chr4:24175834 Bhi04g00960 Bhi-Chr4:24175834 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00959 K01115 - csv:101207900 1570.83