Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00960 TCTGAGTTTTCCTGTTTGTTCGACGCATTTTCGGGGAAAAGCAAGGATCCTTTTCTCTTTCAACTCTGTTGCAAGATACAAATGCCGCGCTTGCTTCATGGGACGCTTCATGCTGATATATATAGAATCGACAGACTTCAAACTGGATTTCCTATTTTCTGTGGGAAGGACAAAAGGTCGACCAAAAAGTTTCTTGCCGGAGTGAAGAGACGCATCCTTTGCCGTCCCGAGATTGTTGGATCTCAAATGTATGCAACAGTCGATCTTGATAAGGCCAGAGTTGGCAGGACGAGAATAGTGGATCAGCCATACAGTCCTCAGTGGAACGATCATTTTCGTATATATTGTGCTCATACAGTGTCACACATTATATTCACAGTTAAAGATGGAGATGTAATTGGTGCAACATTAATTGGAAGAGCTTATGTGCCTGTTGAGGATATCATTAAGGGATTTGTATATGAGAAATGGGTTGAAATATTAGATGAAGACGGTAAGCCTTTGTATGGTCGTTCTAGAATCCATGTAAAGTTGCAATTTTCAAGTGTTAATGAAGACAGGAACTGGTCCCGAGGAATCCCAGATCCAAAGTTCAGTGGGATACCTTTCACATTCTTCAACCAAAGATGGGGTTGCAAAGTTTCTCTTTACCAGGATGCTCATGTTTTAAACAACTTCCTCCCTCGAGTTGGTTTGTCAGGAGGGAATTTTCATGAAGTACACAGGTGTTGGGAGGACATTTTTGATGCAATTAGCAATGCAAGACACTTGATTTACATAACTGGTTGGTCTGTGCATACCGGAATAACTTTGATAAGAGACCGGGAAAGAAGACAGACAGGAGAGGATATTACTCTGGGACAACTGCTAAAGAAGAAGGCCGAAGAAGGTGTGACTGTTTTGCTTCTTGTTTGGGATGACAGAACTTCCGTTGAAGAGTTCAAAAGAGATGGTTTGATGGCAACCCATGATCAAGAAACTGCAGAATACTTCAGGAACTCGAAGGTACATTGCGCTCTGTGTCCACGGAATCCTGATGTTGGTAGAAGTATAATTCAGGGTTTTGAGACGGCTACCATGTTTACTCATCACCAAAAGACAGTTGTGCTTGATAGTGAAATAGCTGGTGGAGGAACAGAGAAAAGAAGGATCATAAGTTTTGTTGGTGGCATTGATCTGTGTGATGGGAGATATGATACACCAAAGCACCCTTTGTTTTCAACTCTAGATTCAATCCACTATAGCGATTTTCACCAGCCTAGCATTTCAGGCTCTTCAATTAGGAAAGGTGGTCCTCGGGAACCATGGCATGACATCCATTGCCGCCTAGAAGGGCCTGTTGCTTGGGATATTCTGTACAATTTTGAACAAAGATGGCGAAAGCAAGTTGGAAACAACTTGTTAATTCCAATGCAAAAGCTTGAAGAAACCATTACCCGCCCAGTAATGGTTCTACCAGCAGACGACCCCGACTCCTGGAATGTTCAAATATTTCGGTCTATTGATGGTGGTGCTGTAGATGGCTTTCCAGATACACCTGAAGATGCATCCAGAGTAGGCCTTGTAAGTGGGAAGGATAATGTTATAGATAGGAGTATTCAAGATGCTTATATTAATGCTATTCGCAGAGCGAAAAATTTCATATATATTGAGAATCAATATTTCCTTGGAAGCTCTTATGGTTGGAAATCAAATGGTATAAGGGTAGAAGAAATCAATGCTTTGCATCTTATTCCAAAGGAGATCTCGTTGAAGATTGTGAGCAAGATTGAAGCTGGAGAGAGATTTACAGCATATATTGTCATTCCAATGTGGCCAGAAGGCATTCCTGAGAGTGCTTCAGTTCAAGCAATATTAGATTGGCAAAGGAGAACCTTAGACATGATGTACACAGATATAGCTCAAGCCCTTCGGAAGAAGGGTCTCGATGCAAATCCTAGAGATTACTTGACATTCTTCTGCCTTGGCAATCGAGAGAAGACGAGAAGTGGAGAATATGTACCACCAGAGAAACCAGAGCCCAATTCAGATTATGCTCGGGCTCAAGAGCACCGACGTTTTATGATCTATGTTCATTCAAAAATGATGATAGTTGACGATGAATACATAATTATTGGGTCTGCCAACATCAACCAGAGGTCAATGGACGGAGGAAGAGACTCCGAGATTGCAATGGGGGCTTTTCAACCTCATTATTTGGCATCTGGTGAGCCTGCAAGAGGTCAAATCTATGGCTTCAGAGTGGCTCTATGGTACGAGCATCTTGGTCTGTTTGACAAAGCCTTCCATAACCCAGAGAGTGAAGAATGCATCCAATTCGTAAACAAGCTCGCTCTAGAGAACTGGCAATTTTACTCAGACGATACCTTTGATGGCGATCTTCCTGGCCATCTGCTTTCCTATCCCATCCAAGTAGGCTCAAACGGATCGGTTTCGGCGCTGCCAAAGTTTGAATTTTTCCCTGACACGAAGGCTCGTGTTCTTGGGCAACTAGCCGAGTATCTACCTCCAATCCTTACCACTTGACGACATGTCGTGTGAGGAGGATTATTTGCGTGATTTGATCATCTCCTCGTACCTAGGATTGGTTGGTCAAAAGATGTAAATATGTTGTGTCGGTAAAGATTTGATCTTTAGATGACTTGATTGATGTTGAATTGTTTCATTATTCTCAGAACAAAAAGGGAAAGTTAGAAATTGGAACAATACAGAAGACTAGAAGAGAAAAGAATAGTTTTTATAGACTTAAAATATTGGAATATATTCTCAAATTTGACC 2778 41.72 MPRLLHGTLHADIYRIDRLQTGFPIFCGKDKRSTKKFLAGVKRRILCRPEIVGSQMYATVDLDKARVGRTRIVDQPYSPQWNDHFRIYCAHTVSHIIFTVKDGDVIGATLIGRAYVPVEDIIKGFVYEKWVEILDEDGKPLYGRSRIHVKLQFSSVNEDRNWSRGIPDPKFSGIPFTFFNQRWGCKVSLYQDAHVLNNFLPRVGLSGGNFHEVHRCWEDIFDAISNARHLIYITGWSVHTGITLIRDRERRQTGEDITLGQLLKKKAEEGVTVLLLVWDDRTSVEEFKRDGLMATHDQETAEYFRNSKVHCALCPRNPDVGRSIIQGFETATMFTHHQKTVVLDSEIAGGGTEKRRIISFVGGIDLCDGRYDTPKHPLFSTLDSIHYSDFHQPSISGSSIRKGGPREPWHDIHCRLEGPVAWDILYNFEQRWRKQVGNNLLIPMQKLEETITRPVMVLPADDPDSWNVQIFRSIDGGAVDGFPDTPEDASRVGLVSGKDNVIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWKSNGIRVEEINALHLIPKEISLKIVSKIEAGERFTAYIVIPMWPEGIPESASVQAILDWQRRTLDMMYTDIAQALRKKGLDANPRDYLTFFCLGNREKTRSGEYVPPEKPEPNSDYARAQEHRRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDSEIAMGAFQPHYLASGEPARGQIYGFRVALWYEHLGLFDKAFHNPESEECIQFVNKLALENWQFYSDDTFDGDLPGHLLSYPIQVGSNGSVSALPKFEFFPDTKARVLGQLAEYLPPILTT 814
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24175834 24180590 - XM_039029412.1 Bhi04g00960 32569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00960 814 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 660 687 IPR001736 GO:0003824
Bhi04g00960 814 SMART C2_3c 8 130 IPR000008 -
Bhi04g00960 814 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 53 156 IPR035892 -
Bhi04g00960 814 Pfam Phospholipase D C terminal 732 803 IPR024632 -
Bhi04g00960 814 PANTHER PHOSPHOLIPASE D 3 814 IPR015679 -
Bhi04g00960 814 Gene3D C2 domain 40 164 IPR035892 -
Bhi04g00960 814 PANTHER PHOSPHOLIPASE D ALPHA 3 3 814 - -
Bhi04g00960 814 ProSiteProfiles C2 domain profile. 1 131 IPR000008 -
Bhi04g00960 814 CDD C2_plant_PLD 1 153 - -
Bhi04g00960 814 Pfam Phospholipase D Active site motif 332 370 IPR001736 GO:0003824
Bhi04g00960 814 Pfam Phospholipase D Active site motif 661 687 IPR001736 GO:0003824
Bhi04g00960 814 Gene3D Endonuclease Chain A 482 704 - -
Bhi04g00960 814 Gene3D Endonuclease Chain A 208 456 - -
Bhi04g00960 814 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 332 370 IPR001736 GO:0003824
Bhi04g00960 814 SUPERFAMILY Phospholipase D/nuclease 487 743 - -
Bhi04g00960 814 Pfam C2 domain 44 133 IPR000008 -
Bhi04g00960 814 SUPERFAMILY Phospholipase D/nuclease 158 447 - -
Bhi04g00960 814 SMART pld_4 660 687 IPR001736 GO:0003824
Bhi04g00960 814 SMART pld_4 332 370 IPR001736 GO:0003824
Bhi04g00960 814 PIRSF PLD_plant 1 814 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00960 Bhi-Chr4:24175834 Bhi09g00029 Bhi-Chr9:528873 0 dispersed
Bhi04g00959 Bhi-Chr4:24175834 Bhi04g00960 Bhi-Chr4:24175834 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00960 K01115 - csv:101207900 1582.39