Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g00969 ATCCCCTTCCGCTCTTCCGCTCTTCCGCTCTTCCGCTCTACGATCTTTCGAAAGCCAGGTCTTAACAATTTCTCTCCGGCTAACTTAGTTTTCCTTTGCAGACTTTTTGTAATCGCTTCCCTAACTCTGAAGTTCAGTTCTTAGCAGGCTAGCAGAAATGGGAGAAACAAGGGACAACGAATACGAGGAAGAGCTCCTCGACTACGAAGAAGAGGAAGAGAAGGCCCCCGATTCCGTTGGAGCTAAAGTCAACGGTGAAGCTGGAAAGAAGGGTTATGTTGGAATTCATAGTTCGGGATTCAGAGACTTCCTATTGAAGCCAGAGCTTCTCCGTGCTATTGTTGACTCTGGATTTGAGCACCCATCTGAAGTTCAACATGAATGTATTCCCCAAGCTATCCTCGGCATGGATGTTATTTGTCAAGCTAAATCTGGTATGGGTAAAACTGCTGTTTTTGTTCTGTCAACACTGCAGCAGATTGACCCTGTTGCTGGTCAAGTTTCTGCCCTAGTTCTGTGCCATACTAGGGAGCTTGCATACCAGATCTGTCATGAGTTCGAAAGGTTCAGCACTTATCTTCCGGATCTGAAGGTTGCTGTCTTCTATGGTGGAGTGAATATTAAAATTCACAAAGATCTTCTGAAAAATGAATGTCCTCATATTGTTGTTGGAACACCCGGAAGGATACTGGCATTGTCAAGAGATAAAGACCTATCCCTGAAGAACGTCCGGCATTTTATCTTGGATGAGTGTGATAAGATGCTTGAGTCACTTGATATGCGGAGGGATGTACAGGAGATTTTCAAGATGACTCCTCACGACAAACAAGTTATGATGTTTTCTGCAACACTCAGCAAAGAAATCCGCCCAGTTTGCAAGAAGTTTATGCAAGATCCAATGGAAATATATGTAGACGACGAGGCAAAACTGACATTGCATGGTCTTGTCCAGCACTACATCAAATTGAGCGAGATGGAGAAGAATCGAAAGTTGAATGACCTCCTTGATGCATTGGACTTCAATCAAGTGGTTATTTTTGTTAAAAGTGTTAATAGGGCAGCTGAGCTGGATAAGTTGTTGGTGGAGTGTAATTTTCCCTCGATATGCATCCACTCTGGCATGTCTCAGGAAGAGAGGTTGACTCGATACAAGGGTTTTAAGGAAGGACATAAGCGGATTCTTGTGGCTACAGATTTGGTTGGTCGTGGAATTGACATTGAACGTGTGAACATTGTTATCAATTATGATATGCCAGATTCTGCTGATACTTATCTGCACAGGGTTGGCAGAGCTGGTAGATTTGGCACCAAAGGGCTTGCTATTACTTTCGTATCATCTGCAGCTGATTCTGATGTCCTCAATAATGTTCAAGAAAGGTTTGAAGTCGATATTAAGGAGCTTCCAGAGCAGATTGATACATCCACATACATGCCATCATAGATGTAGAGATCTTCAGCATAGAATATCAGCTACCCAAGTTGGTGAGGGTGGTTCACATGTCATTGTGGTTTGATTTTGATTCGAACTAAAAATGGATGAAAGCCACTGCGCACTAGCTTTGATGTGAGTGAGGGCAAATGGTGTATGCTCTAAATGTGGTGGTGTACGCTGCCATTTGAGTTTATTGTATTCTAATTGCTGGGGCTGTCTTGCATGGGAAGTCTTTTTATTATGCACATTTTATTCTGAATCACGAATGATAGAAATGATGTAATACTTTAGATATCCCTTCTCTGCAAGACTAACAATTACGGTAGACTGTTGGGTAGTATTTGCAGTGATTTTTATTAGATTCGTTATGTGAACTCATTTCACTTAGTTCCATAGCCTACCTGTGTTCTCTTGTCTCACTGCCCTATTGCAGATGTTTTGATGTGGATTTTTCTGAAGCGTTATATTATGCGGAAATAAAAAAAAGATCAAGTTTTGGGAA 1934 41.88 MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILALSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQIDTSTYMPS 427
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 24190885 24196091 + XM_039029334.1 Bhi04g00969 32578
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g00969 427 Pfam DEAD/DEAH box helicase 71 236 IPR011545 GO:0003676|GO:0005524
Bhi04g00969 427 Pfam Helicase conserved C-terminal domain 276 383 IPR001650 -
Bhi04g00969 427 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 115 394 IPR027417 -
Bhi04g00969 427 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 46 74 IPR014014 GO:0003724
Bhi04g00969 427 Gene3D - 259 426 IPR027417 -
Bhi04g00969 427 SMART ultradead3 65 266 IPR014001 -
Bhi04g00969 427 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 77 250 IPR014001 -
Bhi04g00969 427 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 27 422 - -
Bhi04g00969 427 MobiDBLite consensus disorder prediction 1 22 - -
Bhi04g00969 427 Gene3D - 42 258 IPR027417 -
Bhi04g00969 427 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 56-LIKE 27 422 - -
Bhi04g00969 427 CDD DEADc_DDX39 45 252 - -
Bhi04g00969 427 CDD SF2_C_DEAD 263 392 - -
Bhi04g00969 427 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 278 423 IPR001650 -
Bhi04g00969 427 MobiDBLite consensus disorder prediction 1 29 - -
Bhi04g00969 427 SMART helicmild6 302 383 IPR001650 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00969 Bhi-Chr4:24190885 Bhi09g00364 Bhi-Chr9:7599653 1.04E-76 dispersed
Bhi04g00968 Bhi-Chr4:24190885 Bhi04g00969 Bhi-Chr4:24190885 0 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g00969 K12812 - csv:101217346 837.41