Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01039 TCCCCGCTCCTCTTCTGTTGACGCTCCTCGGCCCTGTTCCTCACCCGCTAGCTCCGTCGCTTATGGCTGCCGTCTCATTCCATTTTTATGTGCTCAAAGCTTTGGCCGACTGGCTGATCGGAGAAGATGTTGGAATGGAGCTTCCTGTGATGCTGTAAGCGTAGTTGCGGTTTAACTCCGTTTCTCTTTAGCACGTGCTTGTAGATTGATTATGCGGTTGTTGAAGTTATAGCCATGTATTTGCTTGTCCACACACAATAGATCTGTCCAATATGATGAAAGAAATGAAGGTTGCTGTCAGAATCACACGCTCTCAGTCTAATTCCTCGAGTAGACTAGGAGCTATTTCACCCTCATTACAACTTTCACTCAAAGAATTGCGCAAACGTGGTCATACAGAAAACTCTGAACAAGCACAACTAGATGGAAGTAATGCTTCCCCAACTATTACTGTTGGTGTTCGGCGCAAAAGAAGAGCAGTGCTCAAGGATGTTACTAACATGTCCTGTGAGAGTAATAATCTGGGGTGCTTGCATGCTTCTAAAGTTCAGGTACAAGAGGTTTCACAGATTGAATCACTTGAAGATTCACCCATTAAAAGGATGGCCGAATCACGAGGTACCTCTCCAGTGATGATGTCAGATAAAAAAGAGACAACGCAGGAGAACAAGTTTCAGAGTGTAATAGGATGCAAAAATTGTGCATTCCCTGTGCCTTCAGGATCAAACGACCACCAAATGAAAGTTGAGGCTACGGTTTGTGAGAAATTAAGCCATCTCGGTACTTTGGATGCTGTTTCAAACTCAGAAGATCCTCGAGCATGCACCCTATATGCCCATAATATATATGATACTAATCGTGTTATAGAGCTTGATCAAAGGCCTTCTACTAATTATATGGAAAAGCTACAGAAATTTATCACTCCAATCATGCGAGGGATTCTAATTGATTGGCTAGTGGAGGTTTCTGAAGAATATAAGCTGATCTCTGACACACTTTACCTCACTGTGAATCTCATTGATCGGTTTCTCTCTCAAAGTTACATTGAAAGACATAGATTACAACTTCTTGGTGTTACTTGCATGTTAATCGCCTCTAAATATGAAGAAGTCTGTGCACCATTTGTGGAAGAGTTTTGCTGCATCACAGACAACACCTATGCGAGAGAAGAGGTACTAGAAATGGAGGGTGAAGTTCTGAACGTGCTTAATTTTCAGCTCTCTGTTCCCACTACAAAAACTTTTCTCAGGAGATTTGTGCAGGTAGCACAGGCTTCTTGCAAGGAACCTTGTGTCGAGTTCGAGCATTTAACAAATTATTTAGCAGAGTTGACTCTTGGAGAGTACAGCTTCCTCAGGTTTCTGCCTTCAGCAGTAGCTGCATCAGTGGTGTTCTTAGCCAGATGGATTCTGCATCAACCAAATCAACCATGGAACGAGGCTCTAGAGCAATATACCAATTACAGTGCCTCCAAGCTAAAAACTACAGTACTTGCCTTAGAAGATCTAAGATTGAAATCCAGAGATTGCCCTTTAAACGCCGTATTCCAGAAGTATAGACAACAGAAGTTTGGAAGTGTGGCAACTTTAACCTCCACAAAATCAGTTCTCTCAGCTTTGCCAAACCAGACAGACACCTGAATTCCAGGGACATTTGAGACACTTCCTAACTAAACACACCCTTAAAACCGCGATGAACGAGTGGTTTAAAAGAAACAAACAAGGATTCAAATATTTGTGTCGATGTTTTCAGCTTATTTGTTGCCTTGCCACTTGCCACTTGCCACGAGGTTGGAAGCATTTTTTATTATCGAAAAGCAAAGTGGAGGAAATGGGTAATTTAAATTAAAAACAAGGAAACAGAGTATCTTCCACATCCAAAGTCCCAAGTGTTTGGTTAACATCATATGTTTGGAACAAGTGAGTAAAAACAGAGTGATGGACAAGCAAACATCATATGATTATTAAAAGACAATGGTGTCCCCACTTTTAGGACCACAAAAAACTGAATCCATCATATTTACTCAGTTGCATGAATGCCTACCTACTTATACATTGACTTTCCTCTTTTA 2071 41.38 MMKEMKVAVRITRSQSNSSSRLGAISPSLQLSLKELRKRGHTENSEQAQLDGSNASPTITVGVRRKRRAVLKDVTNMSCESNNLGCLHASKVQVQEVSQIESLEDSPIKRMAESRGTSPVMMSDKKETTQENKFQSVIGCKNCAFPVPSGSNDHQMKVEATVCEKLSHLGTLDAVSNSEDPRACTLYAHNIYDTNRVIELDQRPSTNYMEKLQKFITPIMRGILIDWLVEVSEEYKLISDTLYLTVNLIDRFLSQSYIERHRLQLLGVTCMLIASKYEEVCAPFVEEFCCITDNTYAREEVLEMEGEVLNVLNFQLSVPTTKTFLRRFVQVAQASCKEPCVEFEHLTNYLAELTLGEYSFLRFLPSAVAASVVFLARWILHQPNQPWNEALEQYTNYSASKLKTTVLALEDLRLKSRDCPLNAVFQKYRQQKFGSVATLTSTKSVLSALPNQTDT 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25922653 25930380 + XM_039028473.1 Bhi04g01039 32648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01039 455 CDD CYCLIN 317 409 IPR013763 -
Bhi04g01039 455 MobiDBLite consensus disorder prediction 1 57 - -
Bhi04g01039 455 SUPERFAMILY Cyclin-like 318 443 IPR036915 -
Bhi04g01039 455 MobiDBLite consensus disorder prediction 10 27 - -
Bhi04g01039 455 ProSitePatterns Cyclins signature. 221 252 IPR006671 -
Bhi04g01039 455 PANTHER CYCLINS 46 443 IPR039361 -
Bhi04g01039 455 Pfam Cyclin, N-terminal domain 191 317 IPR006671 -
Bhi04g01039 455 CDD CYCLIN 220 309 IPR013763 -
Bhi04g01039 455 Gene3D - 191 438 - -
Bhi04g01039 455 SUPERFAMILY Cyclin-like 179 316 IPR036915 -
Bhi04g01039 455 PIRSF Cyclin_A_B_D_E 2 454 IPR039361 -
Bhi04g01039 455 Pfam Cyclin, C-terminal domain 319 441 IPR004367 -
Bhi04g01039 455 SMART Cyclin_C_2 319 442 IPR004367 -
Bhi04g01039 455 PANTHER CYCLIN-A2-4 46 443 - -
Bhi04g01039 455 SMART cyclin_7 323 411 IPR013763 -
Bhi04g01039 455 SMART cyclin_7 226 310 IPR013763 -
Bhi04g01039 455 Gene3D - 204 317 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01039 Bhi-Chr4:25922653 Bhi09g02286 Bhi-Chr9:63690249 5.27E-138 dispersed
Bhi07g00417 Bhi-Chr7:18633863 Bhi04g01039 Bhi-Chr4:25922653 5.02E-19 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01039 K06627 - csv:101211578 782.711