Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01041 AAAGTGATCTATAAATACAAAAAGGAAAAGAAGGGAAGATTCTCAGGCGAAGGAAGGCAAGCAATGGAGGTCTAAAGCTGGCTGACTCTATCCCTACCTCCCCGATAAAGCAATTTCACCAATTTCACTTCAATTCTTCAAACGCCGTCGTTTCTGCACTCCTCCGATTTCCTCTCCGCTCCCTCCCATCGGCGTTGCCTCAGTCCGATTGGCAGCTTTGTGGATTGACAGAGTTGCATCAAAGGGCTGCAGCAACATCACTTTAAGTTATCTGTAACTATAAAAATTTGTTTCTCTTCTCCATCTCTTTGTGCTGTCCGCCAAATTGGTTTTCTGCTTATGTCTTCGACCTGACTGATATCAAATTGATGTCAAATCCGTGAATAGTTACGAATCAGAAGTGACACGTAGTGGGATAAACGCGGCAGCCTTGTTTTAGAGTTCTATGCTTTCTTTTCCTTCATTGTGTTACTGGACTTAGATGGACGTTCCCTCAGTGGAACTAAATCGTGAAAGTGAAGGAGACTCTTATCCTTTATTAATGGCACGGCCAGAAAATTCTAACAGCAGCGAGCATATCATTGACATAACTGGTACTGGTGATTCTGCCCCCTCTGGTTTGCCTCATGGTAGGAGTTCAAATGGCTTAAATTCATTGCAGCCTGAAGATAGACCTTCAAGTAGTACACGAGTTCCCTTGTCTCAACCTTCAATTTCTTCTACTGGATCAAATTCTAGAAATTCCTCATTCATAAGAAGAGGAGATGCACGACGTCGTAGAAGTCCATTAAATTCTGGCCTATGGATATCTATTGAATTACTACTCACTATGAGCCAAATTATTGCAGCTATTATTGTCTTATCATTGTCAAAGAATGAAAAACCTCGTGCCCCTTTGTTTGCATGGATCGTGGGATATGCATCTGGATGTGGTGCCACCCTTCCTCTTCTCTATTGGCGTTATCGACACCGCAATCAGGCTTCAGAACAAGATTCTCTTCAGTCCAGCCAGAATTCTTCTCGCATTAATGTTCCTGCTGGGCCATTCTCTCTTTCAGTTTCAAGGGCATCAGAAGGCGAAGAACTTCAGCATCCTGCCCCATCTCCTAGAGGCAGTCAAGGGTCAGGAGTACTATCAGCAAGATTAAAAGTATTGGTTGAATATTTTAAGATGGGCCTGGATTGCTTCTTTGCTGTTTGGTTTGTAGTTGGTAACGTTTGGATCTTTGGAGGGCATTCATCCGCCTCTGAGGCTCCTAACTTGTACAGGCTATGTATAGTGTTTCTTACCTTCAGCTGTATTGGTTATGCCATGCCCTTCATTCTGTGTGTAACCATCTGCTGTTGCCTACCTTGTATAATTTCCATCCTTGGCTTTAGAGAGGACTTGACGCAGACCCGAGGAGCCACATCAGAATCTATTAATGCATTACCAACTTATAAGTTTAAGCTGAAGAAAAGTAGATGTGGGGATGATAGAGAAAACAACTCTGGGGCTGGTGAAGGGGGAGGGGTTGTGGCTGCTGGAACTGAAAAGGAGCGAGTGATTTCTGGAGAAGATGCTGTCTGTTGCATCTGCCTCGCAAAATATGCTAACAATGACGAACTGAGAGAGTTGCCGTGTTCACACTTTTTCCACAAGGACTGTGTAGATAAATGGTTGAAGATCAATGCACTGTGCCCCCTTTGCAAAACCGAGGTCGGTGAGAGTCTTATCAGCTCTCTTGAGGGGACAAACAGACAACAACAGGGTGATTAGCGAGGGGAGTGGCTAGAATACATTGTGCCGGGTTTTACACAAGTTCCCTGGGTGGGTTCTGCAGGAATTTGAAATTTCACTGATGGAAATGTAGTATGTGCAAGCTCATCCTTTCTCGAGCCGTTCGACCTTATTTTTGGATTCTTATGCGGCATTCGTTAGAGCCTTGAACAAGTTCCTCTTGTAGCAAATCCATCCATTGTCAATATAGGCAGGGTTATATGGTGCATGCTGGATGTTCTGAACGAGGAGAGTTCGTTCTGCGACTGCTTGTTTCAACAGGAAGTGAAGTGAAAATTGCAAATGTTGCAAGGTTTATACTTGTATAATCACCACTCCTTGCTCTTGTTTTACCCTCTTCAATTTTGTGGTATAATGGCTATTGGTAATGAATAATGAGTAGAGTATACTGTGCAAGTCTAGTATAATATATATATGTTTGCAAGTTCACCCA 2213 43.24 MDVPSVELNRESEGDSYPLLMARPENSNSSEHIIDITGTGDSAPSGLPHGRSSNGLNSLQPEDRPSSSTRVPLSQPSISSTGSNSRNSSFIRRGDARRRRSPLNSGLWISIELLLTMSQIIAAIIVLSLSKNEKPRAPLFAWIVGYASGCGATLPLLYWRYRHRNQASEQDSLQSSQNSSRINVPAGPFSLSVSRASEGEELQHPAPSPRGSQGSGVLSARLKVLVEYFKMGLDCFFAVWFVVGNVWIFGGHSSASEAPNLYRLCIVFLTFSCIGYAMPFILCVTICCCLPCIISILGFREDLTQTRGATSESINALPTYKFKLKKSRCGDDRENNSGAGEGGGVVAAGTEKERVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINALCPLCKTEVGESLISSLEGTNRQQQGD 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25945102 25950589 + XM_039028417.1 Bhi04g01041 32650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01041 425 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 1 422 - -
Bhi04g01041 425 CDD RING-H2_RNF111_like 362 404 - -
Bhi04g01041 425 SMART ringv_2 362 404 IPR011016 GO:0008270
Bhi04g01041 425 ProSiteProfiles Zinc finger RING-type profile. 363 404 IPR001841 -
Bhi04g01041 425 MobiDBLite consensus disorder prediction 46 90 - -
Bhi04g01041 425 MobiDBLite consensus disorder prediction 1 96 - -
Bhi04g01041 425 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 346 411 IPR013083 -
Bhi04g01041 425 SUPERFAMILY RING/U-box 355 409 - -
Bhi04g01041 425 Pfam Ring finger domain 363 404 IPR001841 -
Bhi04g01041 425 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 1 422 - -
Bhi04g01041 425 SMART ring_2 363 403 IPR001841 -
Bhi04g01041 425 MobiDBLite consensus disorder prediction 22 36 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01041 Bhi-Chr4:25945102 Bhi09g01796 Bhi-Chr9:48900440 4.61E-54 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01041 - - csv:101211818 797.349