Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01047 GTTCTGGAAAATCAGTATATCGATTTGATCAGTAGCCGGTAATTTCCTCCAATTTTCCTGTTCAGCGCCTCTTCTCAACTTACTTAACTCGGTCCGTTACCGCCATATTTGTTCTTTCTTTCCCCCAATTTCATTCCCTTTCGCCTTCAATTTCATTCGTGATCCAAATTCAATCGATTTCTTGCTCGTTTTGATCGGAAATTCGTTTCTTATATGTTCGGCTAACTTCGTCGCCGGGATTATTCAACGCGTTTCTGGCCGATTGGGGGTGAATGGCGATTTCGATCCAGATCTAGGGTTTTACTTCCCATCCTCTCGGAATTTGGCGCATTCTACCATTTAGCATTTTGTCGCTAGATTTTCTCTTTGAGGCTCGAGGGATTCGGATCTCGCGTCTGTGCAGGAGAGCTTTACCGCGTTGAAGATGGCTGTCAAAACAGCTCATTCGTTTAGAGATCGGACGCTGGAATTCCAGAACATAACAGAGAGGCTCAAAAAGTCTTTCTCATCTGGCACGGGAACAACTGGACCAAGTGCTGTTTCAAAATCAGAAGAGCAGCGCTCTGCTGTGGCTCTACAGTCTGAATTTAATAAAAGGGCTTCCAAGATTGGATTAGGGATACACCAGACGTCTCAGAAACTCTCAAAGTTGGCAAAATTGGCAAAGAGGACTTCAGTTTTTGATGACCCAACAATGGAAATTCAGGAGCTAACTGCTCTTATTAAGCAGGACATTACAACATTGAACTCTGCCGTTGTAGATCTTCAGCTTCTCTGCAACTCTAGAAATGAAAATGGAAACATATCCAGTGATACTACTAGTCATTCAACCACTGTGGTAGATGATCTTAAGAATCGACTGATGAGCACCACAAAAGAATTTAAAGAAGTTCTGACCATGCGAACAGAAAATTTGAAGGTTCATGAGAACAGAAGACAACTATTTTCTTCTGCTGCTTCAAAGGAATCTACAAATCCTTTTGTTCGCCAGCGCCCATTAGCATCCAGATCAGCTGCTGGTGCCCCAAGCGCACCCCCTCCTCCATGGGCCAAGGCATCTACATCTTTTTCCAAAACATCTACCGGGAAGCAGGTGGATGGGGATGCTCAACCGTTGTTGCAGCAGCAGCAGCAACAGCAACAAATGGTTCCATTACAAGATACTTACATGCAGAGCAGAGCTGAAGCTCTTCAAAATGTTGAATCCACCATTCATGAATTGAGCAATATCTTCAACCAGCTGGCAACTCTGGTTTCTGAACAAGGAGAGATTGCTATCAGGATCGATGAGAACATGGACGATACTCTGGCAAATGTGGAGGGAGCACAGGGAGCTTTGCTCAAGTATCTAAGCAGTATATCATCAAATAGGTGGTTGATGATCAAAATTTTCTTTGTACTAATATTCTTCCTCATGGTTTTCCTATTTTTTGTGGCATAGTCGTCGAAGAGAGAAATGTAATTGGAAAAATGAAGAGGGAAAAAGAAAACTTACTTTTTTTTTGTTGTCTATTAGTAGCCCTTCGTATTCTTTCATACCTCCTGTTAGGCAATCCCATGCATATTATGTACTTTTCAGTCGGAAGATCTGGATTGTGGTCCGATATAATGTTGATAATGTGTCAGTTTGTGAATTGTAAGAGGCCTTAATTACATCGTGACAATTGCCAAAACAATTGGCGAAACCTTTTTTTTCTTTTTTCTCCTCAGTAATTTATAATTATAGTTTGTCTCCA 1736 41.76 MAVKTAHSFRDRTLEFQNITERLKKSFSSGTGTTGPSAVSKSEEQRSAVALQSEFNKRASKIGLGIHQTSQKLSKLAKLAKRTSVFDDPTMEIQELTALIKQDITTLNSAVVDLQLLCNSRNENGNISSDTTSHSTTVVDDLKNRLMSTTKEFKEVLTMRTENLKVHENRRQLFSSAASKESTNPFVRQRPLASRSAAGAPSAPPPPWAKASTSFSKTSTGKQVDGDAQPLLQQQQQQQQMVPLQDTYMQSRAEALQNVESTIHELSNIFNQLATLVSEQGEIAIRIDENMDDTLANVEGAQGALLKYLSSISSNRWLMIKIFFVLIFFLMVFLFFVA 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25961373 25966866 - XM_039029653.1 Bhi04g01047 32656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01047 338 MobiDBLite consensus disorder prediction 209 225 - -
Bhi04g01047 338 SMART tSNARE_6 241 308 IPR000727 -
Bhi04g01047 338 Pfam SNARE domain 282 334 IPR000727 -
Bhi04g01047 338 CDD SNARE_syntaxin5 249 327 - -
Bhi04g01047 338 Gene3D - 50 301 - -
Bhi04g01047 338 PANTHER SYNTAXIN-32-LIKE 7 337 - -
Bhi04g01047 338 ProSitePatterns Syntaxin / epimorphin family signature. 252 291 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bhi04g01047 338 PANTHER SYNTAXIN 7 337 IPR045242 -
Bhi04g01047 338 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 246 308 IPR000727 -
Bhi04g01047 338 MobiDBLite consensus disorder prediction 174 190 - -
Bhi04g01047 338 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 6 25 IPR021538 -
Bhi04g01047 338 MobiDBLite consensus disorder prediction 174 225 - -
Bhi04g01047 338 MobiDBLite consensus disorder prediction 26 45 - -
Bhi04g01047 338 SUPERFAMILY t-snare proteins 52 301 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01047 Bhi-Chr4:25961373 Bhi07g00570 Bhi-Chr7:23407561 4.42E-102 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01047 K08490 - csv:101203633 524.628