Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01091 AAATGGTATTTGTTTTTGCTTCACTGTCATGCACTTTACCATTTTTTGCTTGGTTGAAAGTCTCAAAAAGTGTGCCTTTCATCTTCACTCTCTCTTATTGAATCCTCAAACTACGATTCCGAATCTCAGACCTCCATTGCTGAATTACCCTTCTTCCGATTCATCGCACCGAGTCAACTCATCTCCCCATTTTCCCTGATTTCTTCCTTTTCTCCATGGTTTGTGTCGAAAATGACGGCACCGGTGTCGGTTGATGGGAAAGGGAAGAAGAATATTGAGAATTTGGTGTCTGCTACTAGGTCCTTGAAGGCTAGTTTAGAGAAATCTAGGGTTTTAGGGTTTGCGTTGCAGAAAGCTGGACCGAGATTGGAGGAGATTAGGCAAAGATTGCCGACTTTAGAAGCGGCCGTTCGGCCTATTCGTGCTGATAAGGAAGCCCTTGTCGCCGTCGGTGGCCATATTAATCGGGCTGTTGGCCCTGCGGCGGCGGTGCTTAAGGTTTTTGATGCTGTTCATGGCCTTGAAAAGTCTCTGTTGTCGGACCCGCGGAATGATCTCCCTGGATATTTGTCGGTGTTGAAACGTATGGAAGAGGCATTGAGGTTTCTGGGAGATAACTGTGGGTTGGCAATCCAGTGGTTGGAGGACATTGTTGAGTATTTGGAAGATAATATTGTTGCTGATGAGAAATATCTAGCGAGTTTGAAGAATTCGTTGAAAAATCTTAGGGATTTGCAGAGTGATGAGGGGAGGACTCGGCTTGATGGGGGGCTCTTGAATGCTGCTTTAGATAAACTTGAGGACGAGTTTAGGCGGCTTTTGACAGAGCACAGTGTACCTCTTCCCATGTCTTCTTCGGCATCTCTCGGTGAACAAGCTTGCATTGCTCCATCTCCATTGCCTGTGACTGTCATTCAGAAATTGCAAGCAATTCTTGGGAGATTGATCGCTAACAAACGACTCGAGAGATGCATATCGATTTATGTTGAAGTTCGTAGTTCTAATGTTAGGGCTAGTTTGCAGGCTCTTGATTTGGATTACTTGGAGATATCTGTTTCTGAGTTCAATGATGTGCAGAGCATTGAGGGGTACATTGCAAAATGGGGAAAGCATTTGGAGTTTGCAGTAAAACACTTATTTGAGGCCGAGTTCAAGCTTTGTAATGACGTTTTTGAGAGGATTGGATTGGATGTTTGGATGGGTTGTTTTGCAAAAATAGCAACTCAAGCAGGTATTCTTGCGTTTCTTCAATTTGGTAAAACTGTAACAGAAAGCAAGAATGATCCTATTAAGCTATTGAAGTTGTTAGATATATTTGCATCCTTGAACAAACTCAGACTAGACTTTAATAGGCTTTTTGGCGGGGCGGCCTGTTTGGAAATTCAAAATTTGACTAGGGATCTCATTAAGAGGGTTATCGATGGTGCAGCTGAGATTTTCTGGGAACTTCTAGTTCAGGTGGAGCTCCAGAGGCAAAACTCTCCACCTTTAGATGGGGCAGTTCCAAGGTTGGTTAGCTTCATTATTGATTACAGTAATAAACTGCTTAGTGATGATTATCGGCCGATCCTGACCCAGGCCCTCGTCATTCACCGGAGTTGGAAGAAAGAAAAGTTCCAAGAGGGTCTTCTTGTCAGTGAGGTAACGAACCTAGTTAAAGCCATTGAGCAGAATCTTGACACTTGGATAAAGGCTTATGATGATTCTACCTTGTCAAACTTTTTCGCTATGAACAATCATTGGCATCTATATAAGCACCTCAAAGGAACGAAAGTCGGTGAACTAATGGGAGATAAACTAAAGGAACATGAACAATACAAGGATTACTATGCTGCAGTTTTCTTGAGGGATAGCTGGAGTAAACTTCCTAGCCATTTAAGCAGGGAGGGTTTGATTATGTTCTCAGGTGGCCGAGCTACTGCCCGTGATCTCGTCAAGAAACGTCTAAAGACATTCAATGAAGCTTTCGAAGACATGTATAAGAAGCAGTCAAACTGGGTTATGATTGACAAAGAATTGAGGGAGAAGACATGTCAACTTATAGTTCAAACCATCGTGCCCGTCTATCGTAGTTACATGCAGAATTATGGCCCATTGGTCGAGCAAGATGCGAGTTCCAGTAAGTATGCGAAATACACTGTGCAGAATCTGGAGAAAATGTTACTGTCTCTCTTTCAGCCAAAGCCACTCAGGTACAGTAGCCTTAAAGTTAGGCAGACTAGCGGGAAATTCAGCAATGGTGCAATGGATCATCGTCGTTCCAACTCCATGGTTATGTAACGATCAAACCACCATTTTTATGCAGTGTATAACTTTGGAAGAAGCTGCATCCTTTTCAATGGATGATCAAGTTCAACTTCATCCTGATCCTGAATTGCCCGACACCTCGAACAGGTTCGGACAATCACTTCATTTGTTGAAAAGGAGAAAAGTTCTTCTGAATGGGGCCATCAACTATTGATTTTCTGTGAAGAATTATCGAGGACAGGGTGGGAACTTTTTCTTTAGCCTGCGAGGAGGAATGAAATATTGGCTTTATAGCTCATGAGGAATCTGCCAAAGGCTTTGTGGGCTCAATGATGAACAAGCATAAAAAATGATAGATGATCAGGTCTGTAGATGATACTTTAAGATATAGCTATTTGTATTCCATTTCTCATCACTCATTGATTAAGCAAAGCCAGATGGGCATTAGAAATAGTGTAATTTGTTAGATTTTTGTGTAATTCTTTATTATTAAACATATCTATGTAATCCAACTTCTTGCTCATCATAATTTAGGGAGGAAGAAGAAATTTAATTATAAAGTAAAAATTGGCATCTACCCATCCATGAAAA 2838 41.79 MTAPVSVDGKGKKNIENLVSATRSLKASLEKSRVLGFALQKAGPRLEEIRQRLPTLEAAVRPIRADKEALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRNDLPGYLSVLKRMEEALRFLGDNCGLAIQWLEDIVEYLEDNIVADEKYLASLKNSLKNLRDLQSDEGRTRLDGGLLNAALDKLEDEFRRLLTEHSVPLPMSSSASLGEQACIAPSPLPVTVIQKLQAILGRLIANKRLERCISIYVEVRSSNVRASLQALDLDYLEISVSEFNDVQSIEGYIAKWGKHLEFAVKHLFEAEFKLCNDVFERIGLDVWMGCFAKIATQAGILAFLQFGKTVTESKNDPIKLLKLLDIFASLNKLRLDFNRLFGGAACLEIQNLTRDLIKRVIDGAAEIFWELLVQVELQRQNSPPLDGAVPRLVSFIIDYSNKLLSDDYRPILTQALVIHRSWKKEKFQEGLLVSEVTNLVKAIEQNLDTWIKAYDDSTLSNFFAMNNHWHLYKHLKGTKVGELMGDKLKEHEQYKDYYAAVFLRDSWSKLPSHLSREGLIMFSGGRATARDLVKKRLKTFNEAFEDMYKKQSNWVMIDKELREKTCQLIVQTIVPVYRSYMQNYGPLVEQDASSSKYAKYTVQNLEKMLLSLFQPKPLRYSSLKVRQTSGKFSNGAMDHRRSNSMVM 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 27048327 27051494 - XM_039029054.1 Bhi04g01091 32700

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01091 682 SUPERFAMILY Cullin repeat-like 87 648 IPR016159 -
Bhi04g01091 682 Gene3D Exocyst complex component Exo70 138 654 - -
Bhi04g01091 682 Pfam Exo70 exocyst complex subunit 290 645 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bhi04g01091 682 PANTHER EXOCYST COMPLEX PROTEIN EXO70 14 671 IPR004140 GO:0000145|GO:0006887
Bhi04g01091 682 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 14 671 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01091 K07195 EXOC7, EXO70; exocyst complex component 7 - csv:101207478 1299.26
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00438 Bhi-Chr4:10942050 Bhi04g01091 Bhi-Chr4:27048327 9.73E-73 dispersed
Bhi04g01091 Bhi-Chr4:27048327 Bhi09g00242 Bhi-Chr9:5159378 0 dispersed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi07g00686 . 12 653 EXO70 exocyst subunit family AT5G03540 75.3 6.3e-280 960.7
Bhi03g01779 . 1 638 EXO70 exocyst subunit family AT5G03540 70.7 4.9e-264 907.9
Bhi03g01779 . 1 638 EXO70 exocyst subunit family AT5G52340 79.3 2.3e-295 1011.9
Bhi07g00686 . 14 653 EXO70 exocyst subunit family AT5G52340 74.1 7.4e-270 927.2
Bhi03g01779 . 145 631 EXO70 exocyst subunit family AT5G52350 63.5 2.2e-175 613.2
Bhi07g00686 . 149 653 EXO70 exocyst subunit family AT5G52350 58.7 1.5e-163 573.9
Bhi08g00441 . 1 623 EXO70 exocyst subunit family AT5G58430 67.2 1.3e-247 853.2
Bhi08g00441 . 1 622 EXO70 exocyst subunit family AT1G07000 52.4 2.1e-173 606.7
Bhi01g03318 . 60 673 EXO70 exocyst subunit family AT5G13150 52.8 8.4e-176 614.8
Bhi12g01225 . 105 716 EXO70 exocyst subunit family AT5G13990 54.5 3.4e-191 666.0
Bhi01g02900 . 9 609 EXO70 exocyst subunit family AT1G72470 65.0 1.6e-216 750.0
Bhi01g02900 . 9 607 EXO70 exocyst subunit family AT1G54090 62.2 2.5e-209 726.1
Bhi01g02900 . 9 608 EXO70 exocyst subunit family AT3G14090 63.9 5.0e-218 755.0
Bhi08g01486 . 18 657 EXO70 exocyst subunit family AT5G50380 62.2 9.3e-226 780.8
Bhi04g01091 . 13 682 EXO70 exocyst subunit family AT4G31540 73.9 2.5e-295 1011.9
Bhi07g00980 . 58 614 EXO70 exocyst subunit family AT3G55150 50.5 3.2e-148 523.1
Bhi07g00980 . 31 613 EXO70 exocyst subunit family AT2G39380 50.6 4.8e-152 535.8
Bhi11g02203 . 27 631 EXO70 exocyst subunit family AT3G09520 54.8 1.7e-178 623.6
Bhi10g00657 CCT 35 608 EXO70 exocyst subunit family AT5G59730 50.4 7.4e-153 538.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005903 2 1 2 2 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 1 39
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi04g01091 Bhi_Chr04 FPKM 14.954023 16.976437 18.492025 18.20517 12.293993 13.193165 11.164215 23.296 24.167379 23.616322