Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01111 GCACCAGCTCATCGTTAGCGCCAAGAACGTCAATAAGACATCGTCAATGATCCCTTCAACCTTCATCCATCTCCCTTTTCTTTTTTTTTTTATAAATCTCCATTTTCCATAAATTAATTAATTTATTAATTAACAAATTAACGCCATGACCAAACTTCGGCTCTTCTTCTTCCTCCTCCTCCTCCTCCTCCTCTTCAACCTCCCGCCGCCCACTTCCGCCGCCTCCGCCGCCGCCGAAACCCTCCTCCGATTCAAATCCTCTCTCACCAACGCCATCGTGTTATCCAACTGGAACTCCTCCATCCCTCTCTGCTCCGGCGACCAGCGCTACTGGACCGGCCTCATCTGCAGACACGGCCAACTGTACGGCCTCCGCCTCGAGAACATGAGCCTCGGCGGCGCCATCGACGCCGCCGCCTTAGCCGCCCTCCCGACGCTAAGGACTCTGAGCCTAATGAACAATGGGTTTCAAGGCCCAGTGCCCGATGTGAAGCAAATTGGAGCGCTTAGGGCTTTGTATCTGTCGAATAATAAATTTTCCGGTTCGATTTCTGGAGATGCGTTTGAAGGAATGGGGAATTTGAAGAAATTGTATTTGAGTCGGAATGGATTTTCCGGCGAGATTCCGGCGTCGTTGGTGGAATTGAAAGGGATAATGGAATTGGGATTGGAGGAGAATTTGTTTGAAGGAAGAATACCGGATTTCGGGGAACGGGTTTGGAAGTATTTGAATTTTTCGGGGAATCGTTTGGAAGGGCAGATTCCTTCTGGATTGAAAAAGGATACTAATTTCACTTCGTATCTTGGCAACAACTTATGTGGAGAGCCACTAGCACCATGCAAATCATCCACAAAGAAATGGTCCATTCTCATCGGAGTTCTCTCCGGCGCCGCCGCCTTAATCCTCTGTCTCTCTCTCCTCCGCTGTTTTCTCCGACCATCCAAATCCTCCGCCGCCGTACACGACGACGCCAAAACCAAAACCAAAGCCAAAATGTTCCTCTCTCCGAAAATCCTTTTCAAAAGGCCGGAAATGACCCACCAATATTCCTCGACCGACTCGGACGATAACTCGAATTTGAGCGGTCCGACCGGGTCGGCTCTCTGCTTTGTCAGAACCGACCGTCCCCGGTTCGACTTCCAGGAACTTCTTAGCGCGTCAGCTGAAGTTCTTGGCAGTGGGAGCTTTGGGAAGTCTTATAAAGCGATGCTTTCGAATGGGTCGTCGGCGGTGGTGGTGAAGAGATTCCGGCAAATGAACGCCGCCGGAAAAGACGAATTTTATAGCCACATGCGGCGGCTTGGACGGCTGTCGCATCCTAATTTACTGCCGCTTGTTGCGTTTTATTATGGGAAAGATGATAAGCTTTTGGTGTCTGACTTTGTTTCCAACGGCAGCTTGGCTAGTCACCTTCATGGGAAAAGAGGAGAAGGAAATGCAAGGCTAAATTGGGGAAAGAGGCTAAAAATAATAAAAGGAGTAGCAAGAGGCCTTTTATATCTCCACAAAGAGCTCCCAAATTTAAGCCTTCCACATGGCCATTTAAAATCCTCCAATGTTCTTCTCGACCAAAATTTCACTCCAATTTTATCCGATTATGCCCTTTTCCCCCTCCTCCAAAAATCCCACGCCCACCACCATATGGCCGCCTTCAAGTCGCCGGAATTCTCCCCCGCCGCCCACCACGACCGTACCTCCAAATCCACCGACGTCTGGAGCCTCGGAATCTTAATCCTCGAAACCCTCACCGGAAAATTCCCCACCAACTATCTCCGCCAGGGCAAGGGCGCCGACGACGATCTCGCCGCCTGGGTCGATGCCGTTGTCAGAGAAGAGTGGACGGCGGAGGTTTTTGACGGCGATCTGGTCGGTGGTGGTGGCGGCGGCCGAACGGCGGATGAAGAGGATTGCGGTGATTGGGATTATAATGAAGATATGTTGAAGCTTTTGAAGATTGGGATGTGTTGCTGTGAGTGGGAGATTGGGAAAAGGTGGGGATTGAAACAAGCTGTTGAAAAAATTGAGGAATTGAATTTCAATGATGATGATGATGATATTGAAGAGTATTATTCTTCTTATGGGAGTGATTATAATGGGAGTTTCAAATCTTATTCTTCTCATTTCAAGGGAAGAAGAACAACAGGAACTACTAATGAGGATGAATCTTCCTTTTTGAGTTAGATAAATTGTTCGGAAGATTGTTATAATGTGACTGACATTTCTTTACGTAGGTGAGACTTTTGAAAACGGTCTTGTATTAATAACGGGTAATAGGTATAGGTGGATTTTGAACTTAAGTCGTCAAATTGTTACTAGAATGTTATATGATCATGTGCTTTCTTCTTTTTAATTTTTTTTTTTTTTATATATGATTTTTTTTTTTAATTTGGGTATGTATTTTAATTTAATGGG 2413 46.71 MTKLRLFFFLLLLLLLFNLPPPTSAASAAAETLLRFKSSLTNAIVLSNWNSSIPLCSGDQRYWTGLICRHGQLYGLRLENMSLGGAIDAAALAALPTLRTLSLMNNGFQGPVPDVKQIGALRALYLSNNKFSGSISGDAFEGMGNLKKLYLSRNGFSGEIPASLVELKGIMELGLEENLFEGRIPDFGERVWKYLNFSGNRLEGQIPSGLKKDTNFTSYLGNNLCGEPLAPCKSSTKKWSILIGVLSGAAALILCLSLLRCFLRPSKSSAAVHDDAKTKTKAKMFLSPKILFKRPEMTHQYSSTDSDDNSNLSGPTGSALCFVRTDRPRFDFQELLSASAEVLGSGSFGKSYKAMLSNGSSAVVVKRFRQMNAAGKDEFYSHMRRLGRLSHPNLLPLVAFYYGKDDKLLVSDFVSNGSLASHLHGKRGEGNARLNWGKRLKIIKGVARGLLYLHKELPNLSLPHGHLKSSNVLLDQNFTPILSDYALFPLLQKSHAHHHMAAFKSPEFSPAAHHDRTSKSTDVWSLGILILETLTGKFPTNYLRQGKGADDDLAAWVDAVVREEWTAEVFDGDLVGGGGGGRTADEEDCGDWDYNEDMLKLLKIGMCCCEWEIGKRWGLKQAVEKIEELNFNDDDDDIEEYYSSYGSDYNGSFKSYSSHFKGRRTTGTTNEDESSFLS 678
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 27148831 27155274 - XM_039030431.1 Bhi04g01111 32720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01111 678 Gene3D Ribonuclease Inhibitor 28 137 IPR032675 -
Bhi04g01111 678 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Bhi04g01111 678 SUPERFAMILY L domain-like 32 217 - -
Bhi04g01111 678 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 639 - -
Bhi04g01111 678 PANTHER LRR RECEPTOR-LIKE KINASE 12 639 - -
Bhi04g01111 678 MobiDBLite consensus disorder prediction 659 678 - -
Bhi04g01111 678 Pfam Leucine rich repeat 121 179 IPR001611 GO:0005515
Bhi04g01111 678 ProSiteProfiles Protein kinase domain profile. 337 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g01111 678 Pfam Protein kinase domain 340 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g01111 678 Gene3D Phosphorylase Kinase; domain 1 307 413 - -
Bhi04g01111 678 Gene3D Ribonuclease Inhibitor 138 247 IPR032675 -
Bhi04g01111 678 Gene3D Transferase(Phosphotransferase) domain 1 414 648 - -
Bhi04g01111 678 SUPERFAMILY Protein kinase-like (PK-like) 341 635 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01111 Bhi-Chr4:27148831 Bhi08g02222 Bhi-Chr8:63281115 6.20E-174 dispersed
Bhi04g01111 Bhi-Chr4:27148831 Bhi09g02387 Bhi-Chr9:65113013 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87679 PF00069 Pkinase 2.10E-26 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01111 - - bhj:120076564 1259.97