Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01191 TGAGGTCAGTCGTATGGGATTCTTCTGACGGATGCATCCCACTGAAACTCGCTCGTGTTCGGCACCAGGCAATCCGGCCGTCTAAAGCGCCCCCACGGCGGCTCCGTTCACCGATAACTGCCCCTGTGCGGCGGCAGCTCTGCTGCTCAGCCATGGCTTTTACATCTGCCATTCCTTAACATCAAATATCAGCCAAGTTCCACAACCTTCCCTTCGCTTCCCTACTCTTTTCGTTCGACCTCCTCAAACAACATTGCACTTCGATTTTGGTGCTTGGCAGCGTCTTCGAATTGGTGCAATTCCGTAAGTATTCTGTTTCCGGAGCTGTACAGGAAGTTGAAGTCTCCGTACAGAAGGATTGGAGGCTTGGACCGGCCGACCTGAATAAAATCTAAGTATGAGAACGGGAAAAAGCAATCAGGAAGACGAAGAGTACGAGGAGGATGAGCTAGTTGCCAAAAGAGAGGGGCCTTCTTCTACTTCCAACGCTATTAGTAACATCGGAAACAGCAAAGATGCGAAGAACAACGATAAGGCTAATGCCATACGGTCGAAGCACTCTGTCACGGAGCAGCGCAGAAGAAGCAAAATAAATGAGAGATTCCAGATTTTGAGAGATCTTATACCTCATAGCGATCAAAAGAGAGATACTGCTTCATTTTTATTGGAGGTGATTGAGTATGTTCAGTATTTACAGGAGAAGGTGCAGAAATACGAGGGTTCATATCAGAATTGGAGTGGGGAACCTACTAAGTTAATCCCATGGAGAAATAGTCATTGGCGCATGCAGACTTTTGTTGGCCATCCACAATCTGTAAAAAATGGTTCTGCTTCAGGACCAACGTATTCTGGGAAGTTTGATGATAACAACATTTCGATTTCACCAGCCATGCTTGCAAGCTCACAAAATCCTCTTGACTCCCACTCAGGCAGAGATATTCTACAGGACGCCGACATAACAAATAAAGTTCCACATCCCATGTCTCTGGAAGGAAATATGCATGCTTCTATCCGTAGTGACACCGTTCTCGATCAATCGCTCCACATTCCAATTTCTGATGCACAGACAACAGAATGTCCCATCACCAACAATGCATCAAACCAACCGGAAGAGATGGCTATTGAAGGGGGGACAATAAGCGTTTCAAGTGTTTATTCAGAAGGGTTTATGAACAGCTTGGCTCAAGCTCTGCAGAGTACTGGACTGGATTTGTCACAAGCTAGTATCTCCGTTCAGATTGATCTGGGCAAGAGAGCAAATAAGGGAATGCCGTTTGGAACGCCTATTTTTAAGGAAACTGGGAATCCTCCCTCCAGCCACCCAGCAATGGCAAATGTAGGGGACTTAGGCAGCGGAGATGACTCAGAACAAGCAAAAAAGCGGCTAAGAACATGATAATCTGGCACCTCGAGTCCCCGGTTTATTACACTGCGCCTGTTTTTAATGTGAATTTGAATGTGATGTTTATTGTACAGATTCGCTTCTTTTTTTTTTTTCAATCTTCTTCCTTGACCTTTTATACAATTTTCTTCAAACTCATATTACTAAGACCATCAGTGTTAGGAAATCCAAGTTAAAATTTGGTACTCAGATCTTAGATTTTCCAGTTTCATTGCTCTGTACTCTTATGTTTGTAGTTGTAATCACAATATAAATGGGAACCTCCCAAAAAGAGCTTTAAAGAGGGGATATTATTTTCAGTTGAATATTATTAGTGGTTGGCTCTA 1728 43.92 MRTGKSNQEDEEYEEDELVAKREGPSSTSNAISNIGNSKDAKNNDKANAIRSKHSVTEQRRRSKINERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQNWSGEPTKLIPWRNSHWRMQTFVGHPQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQDADITNKVPHPMSLEGNMHASIRSDTVLDQSLHIPISDAQTTECPITNNASNQPEEMAIEGGTISVSSVYSEGFMNSLAQALQSTGLDLSQASISVQIDLGKRANKGMPFGTPIFKETGNPPSSHPAMANVGDLGSGDDSEQAKKRLRT 332
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 28634849 28641063 - XM_039030180.1 Bhi04g01191 32800
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01191 332 Pfam Helix-loop-helix DNA-binding domain 51 100 IPR011598 GO:0046983
Bhi04g01191 332 CDD bHLH_AtBIM_like 48 124 - -
Bhi04g01191 332 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 47 119 IPR036638 GO:0046983
Bhi04g01191 332 MobiDBLite consensus disorder prediction 1 62 - -
Bhi04g01191 332 SMART finulus 55 105 IPR011598 GO:0046983
Bhi04g01191 332 MobiDBLite consensus disorder prediction 23 43 - -
Bhi04g01191 332 MobiDBLite consensus disorder prediction 297 332 - -
Bhi04g01191 332 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 1 332 IPR044295 GO:0003700|GO:0006351|GO:0046983
Bhi04g01191 332 MobiDBLite consensus disorder prediction 44 62 - -
Bhi04g01191 332 PANTHER TRANSCRIPTION FACTOR BIM2 1 332 - -
Bhi04g01191 332 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 49 99 IPR011598 GO:0046983
Bhi04g01191 332 Gene3D - 47 119 IPR036638 GO:0046983
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01191 Bhi-Chr4:28634849 Bhi01g02238 Bhi-Chr1:53377130 4.01E-65 dispersed
Bhi04g01191 Bhi-Chr4:28634849 Bhi04g01192 Bhi-Chr4:28636017 0 tandem
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
940 PF00010 HLH 1.80E-13 No_clan Bhi TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01191 - - csv:101217750 617.076