Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi04g01192 | TGAGGTCAGTCGTATGGGATTCTTCTGACGGATGCATCCCACTGAAACTCGCTCGTGTTCGGCACCAGGCAATCCGGCCGTCTAAAGCGCCCCCACGGCGGCTCCGTTCACCGATAACTGCCCCTGTGCGGCGGCAGCTCTGCTGCTCAGCCATGGCTTTTACATCTGCCATTCCTTAACATCAAATATCAGCCAAGTTCCACAACCTTCCCTTCGCTTCCCTACTCTTTTCGTTCGACCTCCTCAAACAACATTGCACTTCGATTTTGGTGCTTGGCAGCGTCTTCGAATTGGTGCAATTCCGTAAGTATTCTGTTTCCGGAGCTGTACAGGAAGTTGAAGTCTCCGTACAGAAGGATTGGAGGCTTGGACCGGCCGACCTGAATAAAATCTAAGTATGAGAACGGGAAAAAGCAATCAGGAAGACGAAGAGTACGAGGAGGATGAGCTAGTTGCCAAAAGAGAGGGGCCTTCTTCTACTTCCAACGCTATTAGTAACATCGGAAACAGCAAAGATGCGAAGAACAACGATAAGGCTAATGCCATACGGTCGAAGCACTCTGTCACGGAGCAGCGCAGAAGAAGCAAAATAAATGAGAGATTCCAGATTTTGAGAGATCTTATACCTCATAGCGATCAAAAGAGAGATACTGCTTCATTTTTATTGGAGGTGATTGAGTATGTTCAGTATTTACAGGAGAAGGTGCAGAAATACGAGGGTTCATATCAGAATTGGAGTGGGGAACCTACTAAGTTAATCCCATGGAGAAATAGTCATTGGCGCATGCAGACTTTTGTTGGCCATCCACAATCTGTAAAAAATGGTTCTGCTTCAGGACCAACGTATTCTGGGAAGTTTGATGATAACAACATTTCGATTTCACCAGCCATGCTTGCAAGCTCACAAAATCCTCTTGACTCCCACTCAGGCAGAGATATTCTACAGGACGCCGACATAACAAATAAAGTTCCACATCCCATGTCTCTGGAAGGAAATATGCATGCTTCTATCCGTAGTGACACCGTTCTCGATCAATCGCTCCACATTCCAATTTCTGATGCACAGACAACAGAATGTCCCATCACCAACAATGCATCAAACCAACCGGAAGAGATGGCTATTGAAGGGGGGACAATAAGCGTTTCAAGTGTTTATTCAGAAGGGTCAGTTAGCTTGTTCAAGTCCCAGCATGTATAGGATGTCTGCATAGTT | 1213 | 46.17 | MRTGKSNQEDEEYEEDELVAKREGPSSTSNAISNIGNSKDAKNNDKANAIRSKHSVTEQRRRSKINERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQNWSGEPTKLIPWRNSHWRMQTFVGHPQSVKNGSASGPTYSGKFDDNNISISPAMLASSQNPLDSHSGRDILQDADITNKVPHPMSLEGNMHASIRSDTVLDQSLHIPISDAQTTECPITNNASNQPEEMAIEGGTISVSSVYSEGSVSLFKSQHV | 266 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 28636017 | 28641063 | - | XM_039030181.1 | Bhi04g01192 | 32801 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi04g01192 | 266 | CDD | bHLH_AtBIM_like | 48 | 124 | - | - | |
Bhi04g01192 | 266 | MobiDBLite | consensus disorder prediction | 1 | 62 | - | - | |
Bhi04g01192 | 266 | SMART | finulus | 55 | 105 | IPR011598 | GO:0046983 | |
Bhi04g01192 | 266 | Gene3D | - | 47 | 119 | IPR036638 | GO:0046983 | |
Bhi04g01192 | 266 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 47 | 120 | IPR036638 | GO:0046983 | |
Bhi04g01192 | 266 | MobiDBLite | consensus disorder prediction | 23 | 43 | - | - | |
Bhi04g01192 | 266 | PANTHER | TRANSCRIPTION FACTOR BIM2 | 1 | 258 | - | - | |
Bhi04g01192 | 266 | MobiDBLite | consensus disorder prediction | 44 | 62 | - | - | |
Bhi04g01192 | 266 | Pfam | Helix-loop-helix DNA-binding domain | 51 | 100 | IPR011598 | GO:0046983 | |
Bhi04g01192 | 266 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 49 | 99 | IPR011598 | GO:0046983 | |
Bhi04g01192 | 266 | PANTHER | BES1-INTERACTING MYC-LIKE PROTEIN | 1 | 258 | IPR044295 | GO:0003700|GO:0006351|GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi04g01192 | Bhi-Chr4:28636017 | Bhi02g00050 | Bhi-Chr2:1039629 | 1.49E-54 | dispersed | |
Bhi04g01191 | Bhi-Chr4:28634849 | Bhi04g01192 | Bhi-Chr4:28636017 | 0 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
941 | PF00010 | HLH | 1.30E-13 | No_clan | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi04g01192 | - | - | csv:101217750 | 468.003 |