Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01201 TTTTTCCCGCGGACTCCGGCGTGGCTTAACAAACCCTGTCCCCTTTGTCCCACCATTCCCACCATTTTCACTCCTTCCTTTGAAACTCCATTTTCAAATTCCCCTATTTCTCTCTGTTATGTCCTCCGCCCATCCCCCTTCCTCCTCCTCCACCACTGCCCCCACCGGCGTCGGCCTCGGCTACGGCATTGCCATCGCCGTCAGCATCCTCGTCTTCATCTCCACCGTCATGCTCGTCTCCTACGCTTGCATTCGCGTCAAATCTGCCCGCCCTCGCCCTCGCCCTAGACCCTCCGCTTCTCTCCCTTCTCCCGCCGCTGACAATGTGGTGGTTCTCATGGTCGGATTAGATGGCTCCATCATCGAATCGTACCCTAAGTTAGTCCTCGGAGAGAGTCGCCGTCTTCCCGCCCCTAATCATGGCCCTTGCTCCATTTGTCTCTCTGATTACAAGCCCTACGATTCTCTCCGCTGCATTCCCGATTGTTGCCATTGTTTTCACTCCGATTGCGTCGATGAATGGCTTCGAATGAACGCTACCTGTCCTTTATGTCGAAATTCCCCTGCTCCAACCCCTGTTGCTACTCCTCTCTCTGAGTTTGTGCCTCTGGCTTCCAGTGCCAGGTGATCTTCTTCTTCCTCCTCTTCCTCTTCATTACATTATAGGGTTAGTGTTTACGATTTTTCTCCATGAATTTGTGTCTCTGGTTACTTTTGACTAGTAGTTTTTGATAGATATGGAAACTTTCTGGATTATCTCTAGATGTAAAGTTGGAAAAGTTTCTAATAAATCTCGATTTATACCTTTAA 810 49.88 MSSAHPPSSSSTTAPTGVGLGYGIAIAVSILVFISTVMLVSYACIRVKSARPRPRPRPSASLPSPAADNVVVLMVGLDGSIIESYPKLVLGESRRLPAPNHGPCSICLSDYKPYDSLRCIPDCCHCFHSDCVDEWLRMNATCPLCRNSPAPTPVATPLSEFVPLASSAR 169
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 29151679 29152488 + XM_039030641.1 Bhi04g01201 32810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01201 169 SUPERFAMILY RING/U-box 103 151 - -
Bhi04g01201 169 SMART ring_2 104 145 IPR001841 -
Bhi04g01201 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 151 IPR013083 -
Bhi04g01201 169 PANTHER RING-H2 FINGER PROTEIN ATL69-RELATED 17 152 - -
Bhi04g01201 169 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Bhi04g01201 169 Pfam Ring finger domain 104 146 IPR001841 -
Bhi04g01201 169 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 17 152 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01474 Bhi-Chr1:30333165 Bhi04g01201 Bhi-Chr4:29151679 1.90E-29 dispersed
Bhi01g02941 Bhi-Chr1:72846839 Bhi04g01201 Bhi-Chr4:29151679 6.93E-34 dispersed
Bhi03g01773 Bhi-Chr3:37297340 Bhi04g01201 Bhi-Chr4:29151679 1.27E-40 dispersed
Bhi04g01201 Bhi-Chr4:29151679 Bhi04g00792 Bhi-Chr4:19726080 9.32E-18 dispersed
Bhi04g01201 Bhi-Chr4:29151679 Bhi01g00472 Bhi-Chr1:8500450 2.68E-33 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01201 - - cmos:111462423 271.552