Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01222 GGGTAGAGCTGGAACTCGTCGCAACACAGCCGCACGGGTCTGAGAATGGTGGGGTCTCTCTTCCATCTCTCGTCAAGTTTCTCTGCTGCGGCTTGCGGCTTCTCTCTCTCTTACGTTCAAATCCTCTCTCTCTCTCTCTCTCTCTCGCTCTCTCTTCTTTTGGTTGTTTGGAAGCTCCTGTTGCTTCCCCCAAATCACAGCCCTTCCTTGTTCCTCGTATACCACCATCGCATCTCACTGCGACCTCACAAAACTCCCAATTCCACCTCCACCAACGACAATTTCACTCCTATCATTCTTCCCTCTTTCATGGGTAACAGCCAATTACCCTCTAATGGAGTCCACTTTGGTCAACGAGCCTTCCTGGATTGTTCTTCCAGGAAATTAGTCTTACCCTGATTCTTCCCCACTGAAAGGAATCGCCAGCCTTTTCAAAATTTTTTAATGTGCTTGCTTTTACCTTCCCCTGCCACGCGTGATCACGATTGGGTCGCAGCCATTGCAGGGCTTGATTTATAGATCGGATGGCAGAGAGTAAAGAGAGTTGGGATGGAAGTTATGATGACTCCGGAAGTATATCAGATGACAGCAGTTATTATGCGAGACTGCATATTGAACCTATTTATGACTCGTTTTTGTGCCCTTTAACGAAGCAAGTAATGCGGGATCCTGTTACTATAGAAAGTGGGCAAACCTTTGAACGCGCGGCCATTGAAATGTGGTTCAAGGAATGCAAGGAAAGTAGAAGGAGGCCAATCTGTCCAATGACACTAAAAGAATTAAGAAACACGGATCTGAATCCCAGTATTGCTCTGCGGAATACTATTGAAGAGTGGACTGCTAGGAATGAAGCTGTTCAGCTAGATATGGCTCGTAAGTCACTTAACTTGGGAAGTCCAGAAAAAGAAACTTTGGGATCTTTAAAGTATGTTCAGCATGTCTGCCAAAAGGGTTTGTCAAGGCACATCGCACGAAATGCTGGGTTAATCCCTATGATTGTTAGCTTGTTGAAGAGCACCAGCCGAAAAGTCCAGTTTAGAGCTTTGGAAACCCTTCGAATTGTGGTACAAGAAGACAATGAGTGTAAGGATATATTAGCTGAAGGTGACACTCTTCACACAGTAGTAAAGTTCTTGCGTCATGAGCATTCAAAGGAGAAGGAGGAAGCTGTAGCTTTGCTGTATGAGCTTTCCAAGTCTGAAGCCTTGTGTGAAGAGATTGGTTCAGTTAATGGGGCTATTCTTATATTAGTTGGAATGTCGAGCAGCAAATCTGAGAACATCTCCACAGTTGAAAATGCTGATAGAACATTAGAAAACCTGGAGAAGTGTGAGAATAACATTCGACAAATGGCTGAATATGGTAGACTGAAGCCTCTTCTGACACAGATTCTTGAAGGCCCGCCAGAAACTAAACATTCCATGGCTGCACATTTGGGTGAGCTAGTTCTAAATAATGATGTAAAACTCTTTGTGGCTCAGACTGTGGGGTCGTCTCTAATTAATATCATGAGAAGTGGTGATAAGCAGTCAAAAGAAGCTGCATTAAAAGCCTTGAACCAGATATCGTCTTTTGAGGCTAGTGCAAGAGTTTTGGTTCAGGAAGGGATACTTCCACCTCTCGTTAAGGATCTTTTCGCAGTTGGTTCAAATCCACTTCCCATGAAACTAAAAGAAGTATCTGCAACCATTCTTGCCAATGTTGTGAGCTCAGGTTGTGATTTCAATTCCATTCCAGTGGAACCTAATAATCAGACTACACTTGTCTCTGAAGATACTGTCCATAACCTGCTACAACTCATTAGCAATACCGGTCCAGCTATCGAATGCAAGCTTCTCCAGGTTCTTGTTGGACTTACAAGTTCTCCTTCAACTATTTCAAGTATTGTTGATGCCATTAGAAGCTCAGGTGCAGTTATCAGTTTGGTTCAATTCATTGAAGCCCCACAGCTGGACTTGCGTGTTTCTGCTATAAAGCTCCTCCAGAACATCTCCCCACACTTAAGCCAGGAGCTAGCAGATGCGCTACGTGGTTCAGTTGGCCAGCTGAGCAGTTTATTTAGAATTATAGCAGAAAATACTGGAATCACAGAAGAACAAGCAGCTGCGGTACGGCTTCTAGCTGATCTTCCTGAAATGGATTTTGGCCTCTCCAGGCAGATGCTTGATGAAGGAGCTTTTGAGTTGGTCTACCTTAGAATTGTTCAACTCCGCCAAGGGGAGACTAGGGGTGGCCGATTTTTAACACCATTCCTTGAAGGCCTTGTTCGAATTCTTGCGAGGATTACATTTTTAGTGGGTGCTGTTGAGCCTGGTGCTCTTGAATTTTGTCGCAGTCACAATCTTGCTGCTTTATTCATTGAACTGCTTCAGTCTAATGGACTCGAGAATGTGCAGATGGCTTCAGCCATGGCATTGGAAAACTTATCTCAAGAATCCAAAAATTTGACTCAGATACCTACGCTTCCGGAACCTGGATTTTGTGCCTCAATTTTTCCATGTCTCTGTGCAGAACCAGTGCTGACAGGGCTGTGTCCTCTCCACCGGGGTACGTGTTCTTTGAGGGAAAGTTTTTGTCTTTTGGAAGGTAAGGCAGTGGACAAATTGGTTGCCCTTTTAGATCACACAAATGAGAAGGTTGTCGAGGCAGCGCTTGCGGCACTATCTACTTTATTGGATGATGGGGTTGATGTTGAAAAGGGGGTTAAAATTTTGGACGATGCAGATGGAGTTCAGCCTATATTTAATGTGTTGCTTGAAAACCGTACAGAGAATCTGATGAGAAGGGCCGTTTGGACAGTCGAGAGGCTGTTGCGCATGGAGGACATCGCCATCGAATTCTCAAATAATCCAAAGGTGAGTACAGCGCTTGTTGATGCCTTCCAGCATGGTGACTACAGAACTAGGCAAATTGCTGAGCGTGCCTTAAGACATGTTGATAAGTTACCCAATTTCTCCAATATATTTCCTAATCCTAGTAATTTGGGATAACCTTATTTCTTCTACATAATGCTCGTCCAATTATTTGTGGCTTTTGTTGCCCTTTGCAAATGGAATTTTCTTTCCTTTTCTTTTTTCCTTATCATTATTTCTTATTTTGGTTCGTGAGATTCTAGCCTAAGTATTGGAGGTAGATATCGATGTATAAAGTCTCCAGCTCTTTAGTCTTATCAGGAATTTGATTTGTTGAGTGGTTCTAGCCTGTAAGTTCTTTTGTCGTCAATCAAATAAACTGCATATCAAGTTAGGGATGCAATGTTGGTGAAAGGTGGTGTTTTTCTAAGTTTTTAATTTTCTGGAGGATTGTTTGTCAATGGATTTGTACTTTAATAGATTGAGTTTCTTGACCCA 3350 43.16 MAESKESWDGSYDDSGSISDDSSYYARLHIEPIYDSFLCPLTKQVMRDPVTIESGQTFERAAIEMWFKECKESRRRPICPMTLKELRNTDLNPSIALRNTIEEWTARNEAVQLDMARKSLNLGSPEKETLGSLKYVQHVCQKGLSRHIARNAGLIPMIVSLLKSTSRKVQFRALETLRIVVQEDNECKDILAEGDTLHTVVKFLRHEHSKEKEEAVALLYELSKSEALCEEIGSVNGAILILVGMSSSKSENISTVENADRTLENLEKCENNIRQMAEYGRLKPLLTQILEGPPETKHSMAAHLGELVLNNDVKLFVAQTVGSSLINIMRSGDKQSKEAALKALNQISSFEASARVLVQEGILPPLVKDLFAVGSNPLPMKLKEVSATILANVVSSGCDFNSIPVEPNNQTTLVSEDTVHNLLQLISNTGPAIECKLLQVLVGLTSSPSTISSIVDAIRSSGAVISLVQFIEAPQLDLRVSAIKLLQNISPHLSQELADALRGSVGQLSSLFRIIAENTGITEEQAAAVRLLADLPEMDFGLSRQMLDEGAFELVYLRIVQLRQGETRGGRFLTPFLEGLVRILARITFLVGAVEPGALEFCRSHNLAALFIELLQSNGLENVQMASAMALENLSQESKNLTQIPTLPEPGFCASIFPCLCAEPVLTGLCPLHRGTCSLRESFCLLEGKAVDKLVALLDHTNEKVVEAALAALSTLLDDGVDVEKGVKILDDADGVQPIFNVLLENRTENLMRRAVWTVERLLRMEDIAIEFSNNPKVSTALVDAFQHGDYRTRQIAERALRHVDKLPNFSNIFPNPSNLG 821
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 29519630 29545954 - XM_039028641.1 Bhi04g01222 32831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01222 821 Pfam Armadillo/beta-catenin-like repeat 690 716 IPR000225 GO:0005515
Bhi04g01222 821 SUPERFAMILY ARM repeat 137 448 IPR016024 -
Bhi04g01222 821 Coils Coil 256 279 - -
Bhi04g01222 821 Gene3D - 584 812 IPR011989 -
Bhi04g01222 821 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 43 6 816 - -
Bhi04g01222 821 CDD RING-Ubox_PUB 37 82 IPR045210 -
Bhi04g01222 821 ProSiteProfiles U-box domain profile. 32 111 IPR003613 GO:0004842|GO:0016567
Bhi04g01222 821 SUPERFAMILY ARM repeat 453 806 IPR016024 -
Bhi04g01222 821 Gene3D - 120 539 IPR011989 -
Bhi04g01222 821 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 24 119 IPR013083 -
Bhi04g01222 821 Pfam U-box domain 35 109 IPR003613 GO:0004842|GO:0016567
Bhi04g01222 821 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 6 816 - -
Bhi04g01222 821 SUPERFAMILY RING/U-box 24 114 - -
Bhi04g01222 821 SMART arm_5 142 182 IPR000225 GO:0005515
Bhi04g01222 821 SMART arm_5 677 718 IPR000225 GO:0005515
Bhi04g01222 821 SMART arm_5 184 224 IPR000225 GO:0005515
Bhi04g01222 821 SMART arm_5 350 395 IPR000225 GO:0005515
Bhi04g01222 821 SMART arm_5 310 349 IPR000225 GO:0005515
Bhi04g01222 821 SMART arm_5 451 491 IPR000225 GO:0005515
Bhi04g01222 821 SMART arm_5 595 636 IPR000225 GO:0005515
Bhi04g01222 821 SMART Ubox_2 36 104 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01222 Bhi-Chr4:29519630 Bhi07g01438 Bhi-Chr7:42393080 4.32E-134 dispersed
Bhi04g01222 Bhi-Chr4:29519630 Bhi08g00619 Bhi-Chr8:20447784 1.72E-19 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01222 - - bhj:120075341 1549.64