Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi04g01237 | GAGGGTATTTGATTCCCAGTGCGAACCAACCTACAATGTCCAAGGAGACTCATCAGATCAGAACAGATTTTCTCTCTCTCGCAGTCATAGACATAAATGCACTCGCCTTCCTTTTCGAAGCTACTTAAACTGCACATCTCTCTCTCTCTCTCTTCTGTTTTTTTTCAACTCACAGCTCAAACAAAACTGGAGCTTTTCCAATAATCCGAGCTTGATCGTTTGTGGGGTTCTCTCTCTCGTTCCGTATAATATGGTGTTACCAGTACTTGTTTTTCAAACTTGAATCCCCCACAAGCTTTCGGGAAATGAGATGGATCCACCTACTCTGATCAACGAAAGCTCATTTCCAAGTAACCCAAATGCCAATGCCAATATCACCCCCTACAATCTCTCTGAGATCTGGCACTTCCCAATTAATGGCGGAACCAGTGTTGAAGAATCTGGACCTGCTCTTGCCCTCAGGATGGCTCATCTCGCTCATAATTTGGGCCAGTTTGGAGAGATTGCCATGGGGAATCCAGAGATTTCCTCCACTGACCCAGTTACCTTGCAATTGCAGCAGAGACTAGCTCATGGTCATGGTGTTTCCAAGAAGCGGCGTGATGCAGAGCAAGATTCGCCTAAGGCCAGTTCAACCAGTAATGGCAACAATGCCAATGGCAATAGCGGCACCGCGAATGATTCTGGTGGAAAGCGCCTTAAAACAGCGGCGTGTAGAGATGATAATCACGAATCCAAAACAGAAGCAGAACCCAGATCTGGGAAGGCCGAGCAGAACTCCCAGCCTCCTCCAGAACAACCCAAACAGGATTACATCCATGTGCGAGCAAGAAGGGGCCAAGCAACTGATAGCCACAGTTTGGCAGAAAGGGCTAGAAGAGAAAAGATAAGTGAGAGAATGAAAATTCTACAAGATTTGGTCCCTGGGTGTAATAAGGTCATTGGAAAAGCACTTGTACTTGATGAGATAATAAATTACATTCAATCTCTTCAGCGTCAGGTTGAGTTCTTGTCAATGAAGCTTGAAGCAGTTAATTCGAGAATTGGCCCTGGCATTGAAGTGTTTCCTCCTAAAGATTATGGTCAACAAACATTTGATACAACTGGTGTTGCGTTTGGTTCACAAGCAACAAGAGAATACAGCCGTGGCTCATCACCAGAATGGCTACATATGCAGATTGGTGGCGGTTTTGAAAGAACGACGTAGTCTAGAAAATTCTCTCAACCATTACTAATAAAAGCAAGAAAGAGGCTGTATTCGACCTCCAGTAGAGCTCTCAACAAGTATAGTCCATATGGAAAAATCAAAGGTAGACTTAATTTTTACATTCAGGGATGAAGATATGGATGCTGTTCATAGATCTGCTTTTTAAGTTAGTGATTGAACATCTGTTAGTGTGTTGGAAAGTAGATTCTCTGATATCTCTGCTCATAAACTCCATATAAATACTAAAAAGTTAACCTGCTGAACAAGCATTATTCTTGTGAAAAATAAAGTATTGCTTGGAATGAATTTTCAGCATTA | 1525 | 42.69 | MDPPTLINESSFPSNPNANANITPYNLSEIWHFPINGGTSVEESGPALALRMAHLAHNLGQFGEIAMGNPEISSTDPVTLQLQQRLAHGHGVSKKRRDAEQDSPKASSTSNGNNANGNSGTANDSGGKRLKTAACRDDNHESKTEAEPRSGKAEQNSQPPPEQPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKDYGQQTFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT | 298 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 30806377 | 30809219 | + | XM_039028239.1 | Bhi04g01237 | 32846 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi04g01237 | 298 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 177 | 227 | IPR011598 | GO:0046983 | |
Bhi04g01237 | 298 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 175 | 245 | IPR036638 | GO:0046983 | |
Bhi04g01237 | 298 | MobiDBLite | consensus disorder prediction | 104 | 126 | - | - | |
Bhi04g01237 | 298 | Coils | Coil | 224 | 244 | - | - | |
Bhi04g01237 | 298 | MobiDBLite | consensus disorder prediction | 86 | 165 | - | - | |
Bhi04g01237 | 298 | SMART | finulus | 183 | 233 | IPR011598 | GO:0046983 | |
Bhi04g01237 | 298 | Pfam | Helix-loop-helix DNA-binding domain | 181 | 228 | IPR011598 | GO:0046983 | |
Bhi04g01237 | 298 | Gene3D | - | 174 | 246 | IPR036638 | GO:0046983 | |
Bhi04g01237 | 298 | PANTHER | BNAC05G07950D PROTEIN | 1 | 298 | - | - | |
Bhi04g01237 | 298 | MobiDBLite | consensus disorder prediction | 130 | 150 | - | - | |
Bhi04g01237 | 298 | CDD | bHLH_AtBPE_like | 167 | 252 | - | - | |
Bhi04g01237 | 298 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 1 | 298 | IPR024097 | GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi02g00374 | Bhi-Chr2:7074419 | Bhi04g01237 | Bhi-Chr4:30806377 | 2.76E-100 | dispersed | |
Bhi04g01237 | Bhi-Chr4:30806377 | Bhi01g01175 | Bhi-Chr1:23058893 | 3.30E-47 | dispersed | |
Bhi04g01237 | Bhi-Chr4:30806377 | Bhi05g01240 | Bhi-Chr5:44812916 | 6.13E-44 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
944 | PF00010 | HLH | 2.50E-08 | No_clan | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi04g01237 | - | - | csv:101209222 | 530.791 |