Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01237 GAGGGTATTTGATTCCCAGTGCGAACCAACCTACAATGTCCAAGGAGACTCATCAGATCAGAACAGATTTTCTCTCTCTCGCAGTCATAGACATAAATGCACTCGCCTTCCTTTTCGAAGCTACTTAAACTGCACATCTCTCTCTCTCTCTCTTCTGTTTTTTTTCAACTCACAGCTCAAACAAAACTGGAGCTTTTCCAATAATCCGAGCTTGATCGTTTGTGGGGTTCTCTCTCTCGTTCCGTATAATATGGTGTTACCAGTACTTGTTTTTCAAACTTGAATCCCCCACAAGCTTTCGGGAAATGAGATGGATCCACCTACTCTGATCAACGAAAGCTCATTTCCAAGTAACCCAAATGCCAATGCCAATATCACCCCCTACAATCTCTCTGAGATCTGGCACTTCCCAATTAATGGCGGAACCAGTGTTGAAGAATCTGGACCTGCTCTTGCCCTCAGGATGGCTCATCTCGCTCATAATTTGGGCCAGTTTGGAGAGATTGCCATGGGGAATCCAGAGATTTCCTCCACTGACCCAGTTACCTTGCAATTGCAGCAGAGACTAGCTCATGGTCATGGTGTTTCCAAGAAGCGGCGTGATGCAGAGCAAGATTCGCCTAAGGCCAGTTCAACCAGTAATGGCAACAATGCCAATGGCAATAGCGGCACCGCGAATGATTCTGGTGGAAAGCGCCTTAAAACAGCGGCGTGTAGAGATGATAATCACGAATCCAAAACAGAAGCAGAACCCAGATCTGGGAAGGCCGAGCAGAACTCCCAGCCTCCTCCAGAACAACCCAAACAGGATTACATCCATGTGCGAGCAAGAAGGGGCCAAGCAACTGATAGCCACAGTTTGGCAGAAAGGGCTAGAAGAGAAAAGATAAGTGAGAGAATGAAAATTCTACAAGATTTGGTCCCTGGGTGTAATAAGGTCATTGGAAAAGCACTTGTACTTGATGAGATAATAAATTACATTCAATCTCTTCAGCGTCAGGTTGAGTTCTTGTCAATGAAGCTTGAAGCAGTTAATTCGAGAATTGGCCCTGGCATTGAAGTGTTTCCTCCTAAAGATTATGGTCAACAAACATTTGATACAACTGGTGTTGCGTTTGGTTCACAAGCAACAAGAGAATACAGCCGTGGCTCATCACCAGAATGGCTACATATGCAGATTGGTGGCGGTTTTGAAAGAACGACGTAGTCTAGAAAATTCTCTCAACCATTACTAATAAAAGCAAGAAAGAGGCTGTATTCGACCTCCAGTAGAGCTCTCAACAAGTATAGTCCATATGGAAAAATCAAAGGTAGACTTAATTTTTACATTCAGGGATGAAGATATGGATGCTGTTCATAGATCTGCTTTTTAAGTTAGTGATTGAACATCTGTTAGTGTGTTGGAAAGTAGATTCTCTGATATCTCTGCTCATAAACTCCATATAAATACTAAAAAGTTAACCTGCTGAACAAGCATTATTCTTGTGAAAAATAAAGTATTGCTTGGAATGAATTTTCAGCATTA 1525 42.69 MDPPTLINESSFPSNPNANANITPYNLSEIWHFPINGGTSVEESGPALALRMAHLAHNLGQFGEIAMGNPEISSTDPVTLQLQQRLAHGHGVSKKRRDAEQDSPKASSTSNGNNANGNSGTANDSGGKRLKTAACRDDNHESKTEAEPRSGKAEQNSQPPPEQPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRIGPGIEVFPPKDYGQQTFDTTGVAFGSQATREYSRGSSPEWLHMQIGGGFERTT 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 30806377 30809219 + XM_039028239.1 Bhi04g01237 32846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01237 298 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 177 227 IPR011598 GO:0046983
Bhi04g01237 298 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 175 245 IPR036638 GO:0046983
Bhi04g01237 298 MobiDBLite consensus disorder prediction 104 126 - -
Bhi04g01237 298 Coils Coil 224 244 - -
Bhi04g01237 298 MobiDBLite consensus disorder prediction 86 165 - -
Bhi04g01237 298 SMART finulus 183 233 IPR011598 GO:0046983
Bhi04g01237 298 Pfam Helix-loop-helix DNA-binding domain 181 228 IPR011598 GO:0046983
Bhi04g01237 298 Gene3D - 174 246 IPR036638 GO:0046983
Bhi04g01237 298 PANTHER BNAC05G07950D PROTEIN 1 298 - -
Bhi04g01237 298 MobiDBLite consensus disorder prediction 130 150 - -
Bhi04g01237 298 CDD bHLH_AtBPE_like 167 252 - -
Bhi04g01237 298 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 298 IPR024097 GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00374 Bhi-Chr2:7074419 Bhi04g01237 Bhi-Chr4:30806377 2.76E-100 dispersed
Bhi04g01237 Bhi-Chr4:30806377 Bhi01g01175 Bhi-Chr1:23058893 3.30E-47 dispersed
Bhi04g01237 Bhi-Chr4:30806377 Bhi05g01240 Bhi-Chr5:44812916 6.13E-44 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
944 PF00010 HLH 2.50E-08 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01237 - - csv:101209222 530.791