Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi04g01268 | GGAAATAAACTTTGTAGGGCGCGGGCCACGGGTTTGGACTTTGGAGTTCGACTCTAATCTAACTCCTGCCGGTTCTCTCTCTAATCCTCACCGCGATAGAATAGCCGCGAAGACAAAGCCCAAACGATGCTGCGTCTTCAATGGCTTTCTTCTTCCTTGCTTCCCTCATTTAACCCCGAACTCTTGCCGGAAAGTCTTTCTAACGGCAGACTGTGTAGCCTCAACTCCTTTCGCCCACTCCTTACTCTCAAACCTTCTCCGAAATGCCAATACTCCTGGAACACGCAGCAGCAGCAGCAGCAGTCGCCCTTCGAACCGGGCTCTCAGACCGATTCATTTTCCTCACAAACTCGCGCCAGAGTAGCTGCTGCTGCATTGCCACCGAGGTTTTTTGTTGGTCATTCGATATACAAAGGGAAGGCTGCTCTTACAGTTGAGCCTAGGCCACCCGAGTTTACACCTCTAGATTCAGGGGCGTTCAAAATATCCAGGGAAGGATTTGTATTGCTTCAATTTGCTCCTGCAGCTGGTGTTCGTCAATATGATTGGAGCAGAAAACAGGTCTTCTCATTATCAGTGACAGAATTGGGAAGTCTAGTTGCCCTTGGCCCACGTGAGTCTTGTGAATTCTTTCACGACCCCTATAAGGGAAAAAGTGATGAAGGGAAGGTCAGAAAGATACTAAAAGTGGAGCCTCTTCCGGATGGTTCTGGCCATTTCTTCAATCTCAGTGTTCAGAACAAGCTAATCAACGTGGATGAGAGCATTTATATTCCTATCACCAAAGCAGAGTATACTGTACTTGTTGAGGCTTTCAAGTTTGTCTTGCCGCACCTCATGGGTTGGCATACGATTGCAAACACCATCACGAGGCCTGAAGATAGCATCCGAGTAAATAATGCCAATCCCAGATATGGGGGCGACTTTGAATGGAACAGATAGTCTACTTTTTCTTAGGCCGAAGATGATCGTTGTGCTTATTTCAGTTATCCATATCAAACTAGTTATGAGCTAATCACCTTTTTAATATGGGTCCACGTTTTTTTAATATATCTCTAAACCCTAGAATATATATATAATTTTGTATATTAGTTTTAAATGTTATTGTGGAAGTTACCAATAGAGTTCACTTTCATTCCAA | 1141 | 44.52 | MLRLQWLSSSLLPSFNPELLPESLSNGRLCSLNSFRPLLTLKPSPKCQYSWNTQQQQQQSPFEPGSQTDSFSSQTRARVAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFVLPHLMGWHTIANTITRPEDSIRVNNANPRYGGDFEWNR | 271 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 32421701 | 32424959 | + | XM_039028382.1 | Bhi04g01268 | 32877 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi04g01268 | 271 | Pfam | Whirly transcription factor | 94 | 228 | IPR013742 | GO:0003697|GO:0006355|GO:0006952 | |
Bhi04g01268 | 271 | PANTHER | SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC | 45 | 271 | - | - | |
Bhi04g01268 | 271 | SUPERFAMILY | ssDNA-binding transcriptional regulator domain | 86 | 271 | IPR009044 | GO:0003677|GO:0006355 | |
Bhi04g01268 | 271 | PANTHER | SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL | 45 | 271 | IPR013742 | GO:0003697|GO:0006355|GO:0006952 | |
Bhi04g01268 | 271 | MobiDBLite | consensus disorder prediction | 50 | 70 | - | - | |
Bhi04g01268 | 271 | Gene3D | Transcriptional Coactivator Pc4; Chain A | 79 | 251 | IPR009044 | GO:0003677|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi04g01268 | Bhi-Chr4:32421701 | Bhi06g00113 | Bhi-Chr6:3140253 | 1.02E-50 | dispersed | |
Bhi04g01268 | Bhi-Chr4:32421701 | Bhi04g01269 | Bhi-Chr4:32421702 | 0 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
954 | PF08536 | Whirly | 8.90E-61 | CL0609 | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi04g01268 | - | - | csv:101203474 | 462.996 |