Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01268 GGAAATAAACTTTGTAGGGCGCGGGCCACGGGTTTGGACTTTGGAGTTCGACTCTAATCTAACTCCTGCCGGTTCTCTCTCTAATCCTCACCGCGATAGAATAGCCGCGAAGACAAAGCCCAAACGATGCTGCGTCTTCAATGGCTTTCTTCTTCCTTGCTTCCCTCATTTAACCCCGAACTCTTGCCGGAAAGTCTTTCTAACGGCAGACTGTGTAGCCTCAACTCCTTTCGCCCACTCCTTACTCTCAAACCTTCTCCGAAATGCCAATACTCCTGGAACACGCAGCAGCAGCAGCAGCAGTCGCCCTTCGAACCGGGCTCTCAGACCGATTCATTTTCCTCACAAACTCGCGCCAGAGTAGCTGCTGCTGCATTGCCACCGAGGTTTTTTGTTGGTCATTCGATATACAAAGGGAAGGCTGCTCTTACAGTTGAGCCTAGGCCACCCGAGTTTACACCTCTAGATTCAGGGGCGTTCAAAATATCCAGGGAAGGATTTGTATTGCTTCAATTTGCTCCTGCAGCTGGTGTTCGTCAATATGATTGGAGCAGAAAACAGGTCTTCTCATTATCAGTGACAGAATTGGGAAGTCTAGTTGCCCTTGGCCCACGTGAGTCTTGTGAATTCTTTCACGACCCCTATAAGGGAAAAAGTGATGAAGGGAAGGTCAGAAAGATACTAAAAGTGGAGCCTCTTCCGGATGGTTCTGGCCATTTCTTCAATCTCAGTGTTCAGAACAAGCTAATCAACGTGGATGAGAGCATTTATATTCCTATCACCAAAGCAGAGTATACTGTACTTGTTGAGGCTTTCAAGTTTGTCTTGCCGCACCTCATGGGTTGGCATACGATTGCAAACACCATCACGAGGCCTGAAGATAGCATCCGAGTAAATAATGCCAATCCCAGATATGGGGGCGACTTTGAATGGAACAGATAGTCTACTTTTTCTTAGGCCGAAGATGATCGTTGTGCTTATTTCAGTTATCCATATCAAACTAGTTATGAGCTAATCACCTTTTTAATATGGGTCCACGTTTTTTTAATATATCTCTAAACCCTAGAATATATATATAATTTTGTATATTAGTTTTAAATGTTATTGTGGAAGTTACCAATAGAGTTCACTTTCATTCCAA 1141 44.52 MLRLQWLSSSLLPSFNPELLPESLSNGRLCSLNSFRPLLTLKPSPKCQYSWNTQQQQQQSPFEPGSQTDSFSSQTRARVAAAALPPRFFVGHSIYKGKAALTVEPRPPEFTPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTELGSLVALGPRESCEFFHDPYKGKSDEGKVRKILKVEPLPDGSGHFFNLSVQNKLINVDESIYIPITKAEYTVLVEAFKFVLPHLMGWHTIANTITRPEDSIRVNNANPRYGGDFEWNR 271
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 32421701 32424959 + XM_039028382.1 Bhi04g01268 32877
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01268 271 Pfam Whirly transcription factor 94 228 IPR013742 GO:0003697|GO:0006355|GO:0006952
Bhi04g01268 271 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC 45 271 - -
Bhi04g01268 271 SUPERFAMILY ssDNA-binding transcriptional regulator domain 86 271 IPR009044 GO:0003677|GO:0006355
Bhi04g01268 271 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 45 271 IPR013742 GO:0003697|GO:0006355|GO:0006952
Bhi04g01268 271 MobiDBLite consensus disorder prediction 50 70 - -
Bhi04g01268 271 Gene3D Transcriptional Coactivator Pc4; Chain A 79 251 IPR009044 GO:0003677|GO:0006355
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01268 Bhi-Chr4:32421701 Bhi06g00113 Bhi-Chr6:3140253 1.02E-50 dispersed
Bhi04g01268 Bhi-Chr4:32421701 Bhi04g01269 Bhi-Chr4:32421702 0 tandem
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
954 PF08536 Whirly 8.90E-61 CL0609 Bhi TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01268 - - csv:101203474 462.996