Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01308 TTTGAATGCAGAGGAACATTAAACAGACTGTCTCATCTCAGCAGAGGAATTTTTAATACAGAGACAGAGAAAAACCAGAAGAAAGAAAGGGGAAGGAAGAGAAAAGAATGGGTTCAACAATTTGGAGAAGGAAAGCCCACCTTCCCCTTCCCTCATTGTCTGTCTGGATTATACCCTTTTAGAATAATATATCATCTTTTCATAATCCCTATAATAAATTTAGCTAACCCAAAAAACCAGGTAGAAAAATGTAAAAGCAACAGGCTGCATAAGGACACACTACTAAAGAGAAGAAGGAAAGGGAATAAAGAGAAGAAGGGAGAGAGAAACCATTTCTCTTTCTCCTCTTCCATTCCTTCTTCAGACACAGTTGTCTTGCTCTCCATCTCTTCTTGATGCTCAAAACCCTAACACCAAAATTCATTTATAGTTAAGCTGAGATGTTCTTGTTCATTTGAGAGAAAGGTACCTGAAAAAGAGTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTTCTCCTTCTTCTTCTTCTTCTTAAGCAGCTCCAAACGAAGCCTATAAGCAGACATGTTCGCTACTACTGGCATTCTGTTCTTCATCTGGTTTTTGAGCTCATCTCTGCCTCCTCTTACCATTGCAAATTTGAACTTCAATCTTACTGTCCCACATCTTCTTCCAGATCCTGAGACTGTTGCTTATCAAGTTCAGAGGAGTGTGAATGATTCCTTTTCCAGAAGACAAATGCTGTCCATTCATTCAAAAGGACAATCCAATTCCTGTCAAACCGGAAACCCTATCGACGATTGTTGGCGCTGCGACTCCAACTGGCAAGCCAATCGCCAACGACTAGCTGATTGCGGCATTGGATTCGGCCGAGCTGCCATGGGAGGGAAAGGAGGTCAGATCTACATAGTTACAGATTCCTCCGATTCTGACCCTGTAAACCCTCGCCCTGGAACTCTCCGCTACGCCGTGGTTCAAGATGAACCTCTCTGGATTGTCTTTGCTGCAGATATGACAATCAAACTTAAATACGAACTTATGATGAACAGTTACAAAACCCTAGATGGCCGCGGCGCCAATGTCCACATTACCGGCGGCGGTTGCATCACACTCCAATACATCTCGAATATAATCATCCACAATATCAACATCCATCACTGTGTTCCTACCGGCCACACCAACATCCGATCGTCTCCAACGCATATCGGATACAGAGGAAAGTCCGACGGCGACGGAATCTCGATCTTTAGCTCGCGCAACATCTGGATCGATCATTGCTCGCTCTCATACTGTACCGATGGCTTAATCGACGCCATTATGGGATCGACCGGAATCACGATCTCGAACAACTACTTCTCGCACCACGACGAGGTGATGTTGCTAGGGCATGACGACGGCTTTACGCCGGACTCGGCGATGCAGGTGACGATTGCGTTTAATTTGTTCGGCGAGAAGCTGGTTCAGAGGATGCCGCGGTGCCGACGGGGATACATTCACGTTGTTAACAACGACTTCCGATCTTGGGAGATGTACGCCATTGGCGGCAGCGGTAATCCGACGATCAACAGCCAAGGGAATCGGTATATTGCTCCGGGAAATCCCAATGCGAAGGAGGTAACGAAGCGCGTGGACACAAACGCGGGGGATTGGTCGGAGTGGAACTGGAGGACGGAAGGGGACATAATGGTAAATGGAGCATTTTTTGTGCCCTCCGGCGAAGGACTGAGCAATATGTACGTTAAAGCTTCCAGTTTGCCGCCCAAATCCGCCGCTCTTGTCGACCAGCTCACTCTCAACGCCGGTGTCTTCGGCGGCTCCAGGGAGAGTAGACAGAGCAACTCATATCCCGGAGACGAAAGCACCACCAGCTCGGGATCCAGTGGCAGCGATGGTGGTGGTGACTATTTTGGGATGATATTTGGCGGAGGCGGGATGAACAGTGCACCACCACCATCTCTTTCAGTTGTTAACGTTGTCATTCTAACTCTGTTTACCGTTTTAGTTCTGTACACAAACTCGAACTACGATGTTTTATTATCATTAACAACATTGTCATTGTAGTAATTGAAAATTTTCAGGAAAAAGAAGATATATTAAACAAAAAAGAAAAAGAAAGATCGATCTTTTCC 2128 45.82 MFATTGILFFIWFLSSSLPPLTIANLNFNLTVPHLLPDPETVAYQVQRSVNDSFSRRQMLSIHSKGQSNSCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRAAMGGKGGQIYIVTDSSDSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCITLQYISNIIIHNINIHHCVPTGHTNIRSSPTHIGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSAMQVTIAFNLFGEKLVQRMPRCRRGYIHVVNNDFRSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSLPPKSAALVDQLTLNAGVFGGSRESRQSNSYPGDESTTSSGSSGSDGGGDYFGMIFGGGGMNSAPPPSLSVVNVVILTLFTVLVLYTNSNYDVLLSLTTLSL 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 33216534 33223948 + XM_039028371.1 Bhi04g01308 32917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01308 498 SMART amb_all 149 346 IPR002022 -
Bhi04g01308 498 Gene3D - 74 416 IPR012334 -
Bhi04g01308 498 PRINTS Pollen allergen Amb family signature 97 114 IPR018082 -
Bhi04g01308 498 PRINTS Pollen allergen Amb family signature 121 146 IPR018082 -
Bhi04g01308 498 PRINTS Pollen allergen Amb family signature 157 173 IPR018082 -
Bhi04g01308 498 PRINTS Pollen allergen Amb family signature 221 242 IPR018082 -
Bhi04g01308 498 PRINTS Pollen allergen Amb family signature 301 320 IPR018082 -
Bhi04g01308 498 PRINTS Pollen allergen Amb family signature 323 342 IPR018082 -
Bhi04g01308 498 PRINTS Pollen allergen Amb family signature 365 389 IPR018082 -
Bhi04g01308 498 PRINTS Pollen allergen Amb family signature 394 417 IPR018082 -
Bhi04g01308 498 MobiDBLite consensus disorder prediction 416 442 - -
Bhi04g01308 498 PANTHER PECTATE LYASE 4 434 - -
Bhi04g01308 498 PANTHER PECTATE LYASE 18-RELATED 4 434 IPR045032 GO:0030570
Bhi04g01308 498 SUPERFAMILY Pectin lyase-like 75 414 IPR011050 -
Bhi04g01308 498 Pfam Pectate lyase 157 338 IPR002022 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01308 Bhi-Chr4:33216534 Bhi07g00768 Bhi-Chr7:28247294 0 dispersed
Bhi04g01308 Bhi-Chr4:33216534 Bhi07g00767 Bhi-Chr7:28247064 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01308 K01728 - csv:101207535 892.878