Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01349 ATCATTTAAACTTTCGCTTCCATATACAAATATATATATTTAAAAGAAAAAAAAATCAAATTCTCTAAAGTCTTCTCCTCCTTGGTTTTGACTTCTGAGTTTGGAGAAAACAATGGGATCCCAACAGGAAAATGGCAACCTTGGATGGGCGAAGAACCCCTCTTTATGTGGAGGCGTGGCGGCGTATTGGAACGACGCAGCGGGAGGGCTCGAAGGAAGTCATTTAGAGGAGTTTAAACGTATGGTGGTAGAATTTCGTCGCCCAATTGTGCAACTTGGGGGCGAGAGCCTCACGATAGCACATGTTGCTGCCATTGCTGCTCGTGGCTCTGATGTCATGGTAGAGCTTTCTGAGGAGGCTCGTCCTGCTGTGGAGGCAAGTAGTAGGTGGGTTTTTAAGAGCATAACTAATGGAACAGATAGTTATGGTGTTACGACTGGTTTTGGTTCTACATCGCATCGTAGGACTGACCAAGGAGAAACCCTTCAGAAAGAGCTCATTAGATTCTTAAATGCTGGAATCTTTGGAAATGATCTAAATTCTTGCCATACATTACCACAACAAGCCACTAGGGCTGCCATGGTGGTGAGAATCAACACACTTTTGCAAGGCTATTCTGGCATTAGGTTTGAAATTTTGGAAGCCATAGCCAAATTACTCAACCACAATATAACTCCATGTCTCCCTCTTAGAGGCACCATCACAGCTTCTGGTGACCTAGTTCCTCTCTCATACATTGCTGGACTTTTGATTGGTAGGCCTAATTCTAAGGCGATTGGGCCCAATGGTGAATCTCTTAACCCAATTGAGGCATTTCATCTAGCTGAGATTGGTGGTGGCTTCTTTAGCTTGCAGCCTAAAGAAGGCCTTGCTCTTGTCAATGGCACTGCAGTTGGGTCAGGCTTGGCTTCTATGGTTCTATTTGAAGCTAACTTTCTTGTTATCTTTTCTGAGATCTTGTCAGCAATTTTTGTTGAAGTTATGCAAGGAAAACCTGAGTTTACAGATCATTTGACTCATAAGTTAAAGCACCATCCTGGTCAGATTGAAGCGGCTGCAATTATGGAACATATATTAGATGGGAGTTCTTACGTCAAGACTGCTAAGAAATTACACGAAATTGACCCACTTCAAAAACCTAAACAAGATCGATATGCTCTTAGAACATCTCCACAATGGCTCGGTCCTCAAATTGAAGTCATTAGATACTCCACCAAAATGATTGAACGTGAGATTAATTCAGTGAACGATAACCCATTGATTGACGTGTCGAGAAACAAGGCTTTGCATGGAGGGAATTTCCAAGGCACTCCCATTGGTGTCTCCATGGATAACACTCGTTTAGCTATTGCTTCTATTGGTAAACTCATGTTTGCACAATTTTCAGAACTTGTGAATGACTTTTACAATAATGGGTTGCCTTCAAATCTCTCTGCTAGTAGAAACCCAAGTTTGGATTACGGTTTTAAAGGTGCTGAGATTGCAATGGCTTCATATTGCTCCGAGCTTCAATACTTAGCAAATCCAGTAACCAATCATGTCCAAAGCGCCGAACAACATAATCAAGACATAAATTCATTGGGGTTGATATCATCGAGAAAGACAGCTGAGGCTATTGAGATTTTGAAGCTTATGTCCACAACTTACTTGGTGGCATTGTGCCAAGCTATTGATTTAAGACATATGGAGGAGAATTTAAAGAAAACAGTAAAAAATATTATCAGCCAAGTGGCAAAAAAGATCCTTGTGTTTCACTTTAATGGCGATCTCCATCCAATTAGGTATAGTGAAAAAGATTTGCTTCAAGTCGTGGATAGAGAACATATTTTTGCCTACATCGATGACACTTGTAGTGCATCATATCCATTGATGCAAAAGCTAAGACAAGTGTTGGTGGATCATGCCCTAAAAATTGGTGAAAAAGAAAGCAACCCAAGTGCTTCAATCTTTCAAAAGATTACAGCTTTTGAAGATGAATTAAAAGCACTTTTACCTAAAGAAGTGGAAAATGCAAGAATAGAAGTGGAAAAAGGGAGTCCTGCCATTGACAACCAAATTAAAGAATGTAGATCCTATCCATTGTACAAGTTTGTTAGAGAAACATTGGGGACTCGATTGTTGACTGGTGAGAAGAATGTATCGCCTGGAGAAGAATTCGATGTGGTTTTTTCAGCCATTTCTACTGGAAAATTGATAGATCCAATGCTTGAGTGTTTGAAGGATTGGAATGGTGCACCACTTCCTCTTAGTTAGAGTGTGTTATTTTCTGTCATATCTGTATGGGGACACACATTACCTTTTAAAAACCATTAATTTTTCAATGTGTACATTTAAAATTTCTTATGCCTAATAATGTATTAGACATTAGTAGATATGTATTGAATTTTGACTCATATTCTCTTTA 2405 39.67 MGSQQENGNLGWAKNPSLCGGVAAYWNDAAGGLEGSHLEEFKRMVVEFRRPIVQLGGESLTIAHVAAIAARGSDVMVELSEEARPAVEASSRWVFKSITNGTDSYGVTTGFGSTSHRRTDQGETLQKELIRFLNAGIFGNDLNSCHTLPQQATRAAMVVRINTLLQGYSGIRFEILEAIAKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLIGRPNSKAIGPNGESLNPIEAFHLAEIGGGFFSLQPKEGLALVNGTAVGSGLASMVLFEANFLVIFSEILSAIFVEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKTAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRYSTKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTNHVQSAEQHNQDINSLGLISSRKTAEAIEILKLMSTTYLVALCQAIDLRHMEENLKKTVKNIISQVAKKILVFHFNGDLHPIRYSEKDLLQVVDREHIFAYIDDTCSASYPLMQKLRQVLVDHALKIGEKESNPSASIFQKITAFEDELKALLPKEVENARIEVEKGSPAIDNQIKECRSYPLYKFVRETLGTRLLTGEKNVSPGEEFDVVFSAISTGKLIDPMLECLKDWNGAPLPLS 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 34032716 34036656 - XM_039028055.1 Bhi04g01349 32958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01349 713 CDD PAL-HAL 58 523 IPR001106 -
Bhi04g01349 713 SUPERFAMILY L-aspartase-like 25 712 IPR008948 GO:0003824
Bhi04g01349 713 PANTHER HISTIDINE AMMONIA-LYASE 24 712 IPR001106 -
Bhi04g01349 713 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 24 712 - -
Bhi04g01349 713 Gene3D Fumarase/aspartase (Central domain) 260 708 - -
Bhi04g01349 713 Pfam Aromatic amino acid lyase 60 539 IPR001106 -
Bhi04g01349 713 Gene3D - 526 647 IPR023144 -
Bhi04g01349 713 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 25 703 IPR005922 GO:0005737|GO:0006559|GO:0016841
Bhi04g01349 713 Gene3D - 20 259 IPR024083 -
Bhi04g01349 713 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 195 211 IPR022313 GO:0016841
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01349 Bhi-Chr4:34032716 Bhi10g00520 Bhi-Chr10:11679864 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01349 K10775 - csv:101206890 1276.15