Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01355 ATGGACTTTACAGTTCTAAATTCAGAGTTGTGCTCTCTCAAAAGTGATTCCATGGCCGTCAAGGGCATCAAGAGACGGCGGAGATGTGCTTCTTCTTCCTCCACAGTTGGTGGTGGAGATGGTCAACCACACAAGTCAATGACAGATCATTCCACTGCTACAAAAAGAAGCTCCAAGTTTCGTGGAGTTAGCAGACATCGATGGACGGGACGATTTGAAGCCCATTTATGGGACAAAGGGTATTGGAATCCAACACAAAGGAAGAAAGGAAAACAAGTTTATTTAGGAGCTTATGATGAAGAAGAATTAGCTGCTAGAGCATATGACTTAGCTGCACTCAAATACTGGGGAACATCAACTTTCACTAATTTTACGGTACCTGATTATGAGAATGAGATTAATATAATGAAAACTGTGACAAAGGAGGAATACTTGGCTTCTTTAAGAAGGAGAAGTAGTGGTTTCTCAAGAGGTGTATCGCGATATCGAGGAGTTGCGAGACACCATCACAATGGAAGGTGGGAAGCAAGAATTGGAAGAGTTTTTGGCAACAAGTATTTGTACCTTGGAACCTACGGTACACAAGAGGAGGCAGCAAGAGCATATGACATAGCAGCAATAGAATACAGAGGCATAAACGCAGTGACCAACTTTGATTTGAGTAGTTACATAAGATGGCTTAAACCCCAACACAATCCAAATCATAAGCAACCTTCTTCACCAATTTCCTCCTTTCCAATTGATACTCCAAATAATAATACCCTACATCTGTCTCTTATACACATCTAG 789 41.19 MDFTVLNSELCSLKSDSMAVKGIKRRRRCASSSSTVGGGDGQPHKSMTDHSTATKRSSKFRGVSRHRWTGRFEAHLWDKGYWNPTQRKKGKQVYLGAYDEEELAARAYDLAALKYWGTSTFTNFTVPDYENEINIMKTVTKEEYLASLRRRSSGFSRGVSRYRGVARHHHNGRWEARIGRVFGNKYLYLGTYGTQEEAARAYDIAAIEYRGINAVTNFDLSSYIRWLKPQHNPNHKQPSSPISSFPIDTPNNNTLHLSLIHI 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 34174496 34206336 + XM_039029942.1 Bhi04g01355 32964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01355 262 ProSiteProfiles AP2/ERF domain profile. 59 125 IPR001471 GO:0003700|GO:0006355
Bhi04g01355 262 SUPERFAMILY DNA-binding domain 160 221 IPR016177 GO:0003677
Bhi04g01355 262 MobiDBLite consensus disorder prediction 29 48 - -
Bhi04g01355 262 CDD AP2 58 124 IPR001471 GO:0003700|GO:0006355
Bhi04g01355 262 MobiDBLite consensus disorder prediction 24 60 - -
Bhi04g01355 262 SUPERFAMILY DNA-binding domain 58 125 IPR016177 GO:0003677
Bhi04g01355 262 PRINTS Ethylene responsive element binding protein signature 60 71 IPR001471 GO:0003700|GO:0006355
Bhi04g01355 262 PRINTS Ethylene responsive element binding protein signature 201 221 IPR001471 GO:0003700|GO:0006355
Bhi04g01355 262 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 8 240 - -
Bhi04g01355 262 Pfam AP2 domain 58 117 IPR001471 GO:0003700|GO:0006355
Bhi04g01355 262 Pfam AP2 domain 160 211 IPR001471 GO:0003700|GO:0006355
Bhi04g01355 262 ProSiteProfiles AP2/ERF domain profile. 161 219 IPR001471 GO:0003700|GO:0006355
Bhi04g01355 262 Gene3D AP2/ERF domain 58 126 IPR036955 GO:0003700|GO:0006355
Bhi04g01355 262 Gene3D AP2/ERF domain 160 221 IPR036955 GO:0003700|GO:0006355
Bhi04g01355 262 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 8 240 - -
Bhi04g01355 262 CDD AP2 160 221 IPR001471 GO:0003700|GO:0006355
Bhi04g01355 262 SMART rav1_2 161 225 IPR001471 GO:0003700|GO:0006355
Bhi04g01355 262 SMART rav1_2 59 131 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01355 Bhi-Chr4:34174496 Bhi11g03021 Bhi-Chr11:82199153 9.33E-114 dispersed
Bhi04g01355 Bhi-Chr4:34174496 Bhi03g01071 Bhi-Chr3:21679247 3.83E-08 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
961 PF00847 AP2 1.70E-13 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01355 - - bhj:120076173 531.176