Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01394 TTGAAAAATCTCCGTCCCCGGCACTATTTCTCGTTATTATTATTTTTTTAAAAAAGAAAAACAAATAAAAGACTGAAAATTTGAAAATTACCCGTTTGAGTCTCTCCAAGGAAACACAAGGGCACATCTTGCAAATCCTTTAACCATTTCTGTTAGGGCTTTCATAAAGTTGATGGCGGCTGCAAATCCTCAGCCTTTGCAAGCGCGTCCCTTCCAGGGGCATGTCCAAGTTCCTACAATGATGGGGGATGATGACGCTGAATATGAAGATGGTGGTGGTGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGATGTTATGGATGATGTCGAAGAAGCTCATATGACTTCAGTAAGCGTAGCGAATCATGGAGGGTTGGTCATGGCGTCTAGAACTAGTGAACTTACGCTTTCTTTTGAGGGCGAGGTTTATGTGTTCCCCGCAGTTACTCCCGAAAAGGTACAAGCCGTGCTCTTACTTCTTGGAGGGCGTGATGTGCCAACAGGTGTACCTACAATGGAAGTGCCATATGATCATAATAACAGGGGTATAGTTGACACCCCAAAGCGCTCCAACTTATCACGGAGAATAGCCTCCCTGGTTAGGTTTCGTGAAAAACGGAAGGAGAGATGTTTTGACAAGAAAATTAGGTACACTGTACGGAAAGAGGTTGCACAGAGGATGCACCGTAAGAATGGCCAATTTGCATCCTTAAAAGAAAGTTCAGGTGCTTCAAGTTGGGAATCAGCTCATAGTTGCCTCCAAGATGGGACTCGTTCAGAAACTGTTTTGCGGAAATGTCAACATTGTGGTGTTAGTGAGAACAATACACCTGCAATGCGTCGTGGGCCTGCTGGACCGAGGACTTTATGTAATGCATGTGGTTTGATGTGGGCGAACAAGGGCACGTTGAGAGATCTCAGCAAGGGAGGGAGAAATGTATCTCTGGATCATATGGAACCTGAAACTCCAATGGATGTCAAGCCCACAATCATGGAGGGAGAATTTTCAGGCATCCAGGATGAACATGGAACTCCCGAGGATCCTAGTAAAACCATGACTGAAGGCTCCAGTAATCCTTCCATTGACCCTGACCCAGATGAGGAAGACATAAATGAAACCACTGGAGACCTTACAAATTCATTGCCCATGCGAATTGTCAATCATTCAACAAATGATGATGAGCAGGAACCTCTTGTTGAACTTGCTAATCCGTCAGATACCGATATAGACATCCCCACTAACTTTGATTAGAAGAGGTCAAGTTACCATCAACAATGGAGTGGCAGTTAGGACTTGTATAATTACAAAAAATGTCCATGACATAAGGTTCAAGTGTGCAGTGGTCATCTTTTGGCCGGAACGTTGCACACTGGTCTCAGCTGACGTTAGATCTTCTAACGATGTTGATATTGCTGCCAGAAACTGTTTGTATTCACTGTACGAGTCGAGTTGTTAGGGGATACGGTTGAGTTCTTCCATCAGTGTATGATCTGAGCGATTCATTTGGTAGGATTACTCTTGATTCAATTTTATTGGAAGGTCTGCTTCCCTAATTTATCGTCATAATGATGAAGGGATCAAATGCTTGTGGTGTTTGTATCTTAAGATAGACCTTTGTTTTGCTTCTAATTGACAAATATTATATACAATGACTTGAGCAGTTGCTAATAGAATAAATTTGCACATTGCGAGCCCTGTAATTTTAGTGATGGCCCCTTCCCTTCAGGGACCTTTTTAGTGTAGACTGATGGATTAGCCAATCGCAAAATTGGAAAGTTTGTACTGTTCTGTTTGGTCATGTATAAAAATAACTTGAAAGGAAAATTTACAGTA 1840 43.48 MAAANPQPLQARPFQGHVQVPTMMGDDDAEYEDGGGGGGGGGGGGGGGDVMDDVEEAHMTSVSVANHGGLVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRDVPTGVPTMEVPYDHNNRGIVDTPKRSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKESSGASSWESAHSCLQDGTRSETVLRKCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLSKGGRNVSLDHMEPETPMDVKPTIMEGEFSGIQDEHGTPEDPSKTMTEGSSNPSIDPDPDEEDINETTGDLTNSLPMRIVNHSTNDDEQEPLVELANPSDTDIDIPTNFD 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 35144633 35153723 + XM_039028901.1 Bhi04g01394 33003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01394 361 SMART tify_2 72 107 IPR010399 -
Bhi04g01394 361 MobiDBLite consensus disorder prediction 281 361 - -
Bhi04g01394 361 Pfam tify domain 75 106 IPR010399 -
Bhi04g01394 361 ProSiteProfiles CCT domain profile. 140 182 IPR010402 GO:0005515
Bhi04g01394 361 MobiDBLite consensus disorder prediction 319 333 - -
Bhi04g01394 361 Pfam GATA zinc finger 211 247 IPR000679 GO:0006355|GO:0043565
Bhi04g01394 361 ProSitePatterns GATA-type zinc finger domain. 211 238 IPR000679 GO:0006355|GO:0043565
Bhi04g01394 361 PANTHER GATA TRANSCRIPTION FACTOR 28-LIKE ISOFORM X1 1 361 - -
Bhi04g01394 361 SMART GATA_3 205 258 IPR000679 GO:0006355|GO:0043565
Bhi04g01394 361 ProSiteProfiles GATA-type zinc finger domain profile. 205 253 IPR000679 GO:0006355|GO:0043565
Bhi04g01394 361 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 206 255 - -
Bhi04g01394 361 CDD ZnF_GATA 210 254 IPR000679 GO:0006355|GO:0043565
Bhi04g01394 361 Pfam CCT motif 140 181 IPR010402 GO:0005515
Bhi04g01394 361 ProSiteProfiles Tify domain profile. 72 107 IPR010399 -
Bhi04g01394 361 MobiDBLite consensus disorder prediction 1 49 - -
Bhi04g01394 361 PANTHER GATA TRANSCRIPTION FACTOR 28 1 361 IPR045280 GO:0006355
Bhi04g01394 361 Gene3D - 203 261 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01394 Bhi-Chr4:35144633 Bhi04g01396 Bhi-Chr4:35144811 0 dispersed
Bhi04g01392 Bhi-Chr4:35094400 Bhi04g01394 Bhi-Chr4:35144633 1.18E-63 proximal
Bhi04g01393 Bhi-Chr4:35144633 Bhi04g01394 Bhi-Chr4:35144633 0 tandem
Bhi04g01394 Bhi-Chr4:35144633 Bhi04g01395 Bhi-Chr4:35144633 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
969 PF06203 CCT 1.40E-13 CL0281 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01394 - - mcha:111004894 645.58