Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01401 TCTGGCTTCCTATATAAACCGCCAAGAAAAGGAAATCCACCAACCCTAAAACTTCAGATATCTTCTACCGCAAGAGGCAGCCACCGCCATTCTTTTACATTTCATCGACGCAGTCGTCCTTTCTCATCGTCCGTAACCATGCCTCGTCGGAGCTCTGGGGGACGATCTGCTTCCCGTCCCGCCCCTCGTGCTCCACTGCGCAATCCTCCGGCCCCCGCTAGTTCTGCTCCTCCACCCGCACCTGTACAAGGCGGTGGTGGTGGGTCTATGCTGGGAGGTCTCGGTGCCACTATTGCTCAAGGTATGGCCTTTGGTACTGGAAGTGCTGTGGCTCACAGGGCTGTCGATGCTGTAATGGGTCCTCGGACCATCCAGCACGAGACCATCGATTCATCAACTTCTTCAGCACCTTCAGTAGCAAACAATCCTGGAGGTTCTGATGCTTGTACCGTTCAGTCAAAGTCCTTTCAAGATTGCCTGAACCACTATGGAAGTGACATTAGCAAGTGCCAATTCTACTTGGATATGTTGCAGGAATGCCGCAGGAGCTCAGGTTCTGTTTTGGGTGCTTAAAAGAATTGATTTTTAGAACCTTCATTATGTATTCTCGCTTTGCTCCAATTGGATGACCGCAATGAGCGGTGTCAAGATTATTATGTGTTTTGACAGTGTTTTCATTTTACGACCTACTTTTACAACTTCTAATTTAATAAAAGGTGTTGAATGATGGAAACTTCATCGTTTGGACTCTA 752 48.14 MPRRSSGGRSASRPAPRAPLRNPPAPASSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSTSSAPSVANNPGGSDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA 144
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 35405283 35407969 - XM_039030445.1 Bhi04g01401 33010

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01401 144 MobiDBLite consensus disorder prediction 1 46 - -
Bhi04g01401 144 PANTHER COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 2/NUR77 1 138 - -
Bhi04g01401 144 Pfam CHCH domain 103 136 IPR010625 -
Bhi04g01401 144 MobiDBLite consensus disorder prediction 17 33 - -
Bhi04g01401 144 MobiDBLite consensus disorder prediction 76 101 - -
Bhi04g01401 144 SUPERFAMILY Cysteine alpha-hairpin motif 100 136 IPR009069 -
Bhi04g01401 144 MobiDBLite consensus disorder prediction 79 101 - -
Bhi04g01401 144 PANTHER - 1 138 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01401 - - K22759 csv:101215322 206.838
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g536 . . . . . . . . . Cmo12g00164 . . . Car12g00191 Sed04g0192 . Cpe07g00179 Bhi04g01401 Tan02g2454 Cmetu03g0187 . Hepe10g0442 . Lcy13g1492 . . . . . . . . . . . . . . . . . . . . Bpe05g00436 . . . . . Cma12g00210 . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011813 2 1 2 1 2 0 2 0 0 1 0 0 0 1 1 1 0 3 2 0 1 1 1 0 1 0 1 2 1 1 28
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi04g01401 Bhi_Chr04 FPKM 18.274065 19.526472 0.835577 1.391439 72.744583 74.921394 80.319565 5.247274 4.487371 5.607949