Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01405 ATCTACCCAAAGTTTACAAGTTAGGCTATCTTTGTGCCATTTTATTTCTATATAATATATGTGTATGTGCGTGGGCGCCCACACACATATACGCAGACAAGTTCATGTTCAATCTGAGAAGTAGAGACTAATTTTAATGAAATTTGATTTTTTTTAGAAAAAAGGCTGACCTAGTTAAAACACTGGAAAATATTAGAAAGGAAAAAGAAGAAAATTTTGTAGATGGTTGGTAGTTTTGGGGCCTTGTAGATATGTTACCATGTCCTTTTGGGAGTCGGGAGTTGGGACGGGCCCTTTTCCAAAATCTGTTATTCATGGCATCCTACCAAACCCCTTTACGTCAAACCTATAGAACTCTCCATTTTCAAACGAGAGAGAATAGTGTTTACTTCCGATCACGGTTTCTGTGTTCTTCCCTTTTCTTAATCTGTCAAAATCCATTTGATTTCTCTTTCCTGTGGGGATATCAAAGATCTGCCACGAAGGGAAATACCTAATTTTGATTGATAATTTAGTTACTCTGACCACCAGTTAACTAATTCTCATCATTTTTGGTTAATTAAGTGCCAATATCAGGATATATGATTACTTTAGTAGTTCATCCATAACTGTTAGATGATTCAAATTAGAGGTGATAGTCAATTTAGTTTGGTCAGTTTTGAGGTCAACCAAGGATCGAATCAAACCAATCGATTTTACAAAGAAGAGATCTAAGCCAATGTCCAACAAAGAACAAAATCATTGGATTAGTTTTATTTGGATTGGCTTATTATCAATTTAGGTCTAGATTTTTTTCTTCCAATTCTTATTTTTATTATCACTTTGTTTTGAAAGGGTCATTTTTGCTAATTTAAAATTAAGATTAGGTCTATTTTTTTTTTATAAATTGAAAATTTTCCATTTTTTGCGACAAGCTTCATAATAAATGATTTTTTTTTTTCCTAAACAACAAAGTTACATATACCATAATAATTGAACTATTAAAAAATAGTTTATTTTTAAGGGTATATATATACCATTGGATCAGTTTGGTTTTGATTGGTTTTTCTAATAAAAAACAATCCGAACCAATATTTTTTGGTTTTTTTCAAATACATACCAAAATATCCGTTTTTATACTAAAGAACCAAACCAAACCATTAGATTGGTTTGGATTGATTTGTTTATTTTTTGTTACTCCTAATTCAAATATAGAAATTTATTGGCATTCTAAACTTGGATTCTTGAAAGTAACATTCGAGGGGCAAAGGCTTGTAGAAAGGAAATAAAAGGATTATCAAATTCGTTTAATATTTTAAATTATATCATTTCCTGACAGCTCAATGTCACGGTAACTTTAAACTAAACTGAACATAACCAACAACATCAAGAACGGAAAGTAAAAAGAAAAACTTGGATGAAATAGGAGTTCGTTTTTGACTTACAACTAGCTCCCTCTACATAGCGAATCTTGCACTGCACGCCTATTTAGCGACCAAGTAAAGATATAGACAAAACAGACCATAAAGATTAAACAAAAGTTAATGGTTTCGGATCTTTTGGTTTATTTAAAGCTAAAGAAAACCCAGCCTAATTTGCACATTCAGATGAAAGCAATCTCTTTGTACCCAAACTCAACACATTAATCTCACTTATATAACTATACTCAACCTGCCAGAAATAAGACATTACTTCTGTGAGAAAGAATTGGCATATCTATCAAACAGTTAGTCGAAGGCCGTTGACATGCCGCCTCTGGGTGTGCAACTCTTTATTACAGAACGTCAGGTGACGATGGATAATGGCATAGTCCAAGTCACGTTATCAAACCCAGATGGCATAGTGACTGGAATTCGATATAATGGAGTCGACAACGTGCTCGAAGTTCTCAACGATGAATCTAACAGAGGGTACTGGGACCTCGTGTGGAACTCATCAGCGTCCACAACTGGATTGTTTGATGTGATAAAGTCTACGGGTTTTGAGGTCATAGTGGAAAATGAAGACCAAGTGGAGCTCTCCTTTACCAGATCATGGGATCTGTCTCTCGAGGGAAAGCTTGTGCCTTTAGAGATTGATAAAAGGTTTATAATGCTCCGGGGTTCGTCTGGGTTTTACTCCTACGCTATTTACCAACACTTGAAAGAATGGCCTGGTTTCAACCTTGGTGAAACCAGACTCGCCTTCAAACTCAGAAAGGACAAGTTCCACTATATGGCCATGGCAGACAACAGACAGAGATACATGCCGCTTCCAGATGATCGCTCTCCGCCGAGAGGTCGAGCCCTGGCATACCCGGAGGCTGTCCTGCTCGTCGACCCCATTGAACCAGAGCTCCTGGGAGAGGTGGATGACAAGTATCAGTACTCATGTGACAACAAAGATAGTGGCGTCCATGGATGGATATCCACCGATCCGGCAGTCGGATTCTGGCTAATCACCCCCAGCAATGAGTTTCGATCCGGTGGACCCGTTAAACAGAACCTTACTTCACACGTCGGCCCAACCACTCTAGCTGTTTTTATAAGCGCCCATTACACAGGAGAGGATTTGGTGCCGAAAATTGGAGCCGATGAGGAGTGGAAGAAAGTTTTTGGCCCTGTATTCATCTATCTCAACTCCACTTATGATTCCACCGACGCACTTCAACTCTGGGAAGATGCCAAAGCTCAGGCGACGATCGAAGTCCAAAGTTGGCCTTACAGCTTTCCTGCTTCGGATGATTTTCCAAAGTTAAATCAACGGGGCAGTATCAGTGGTAGACTATTAGTCAGAGATAGCTACGTTAGTGGAGACTTGATACCAGCAAACGGTGCGTTTGTTGGCCTGGCTCCACCAGGAGACGTTGGATCATGGCAACGAGAGAGCAAGGGTTACCAATTTTGGAGTAGAGCAGATGAAAGTGGAAAATTTTCCATCGACGGCGTAAGGCCCGACGACTACAATCTGTTTGCATGGGTCCCCGGTTTTATTGGAGATTATCGTTACGATGCTCTCATCGGCATTACAGAAGGCATTGAGATAGACATGGATGACATAACATACGAGCCTCCGAGACAAGGAGCTACAATCTGGGAAATAGGAATCCCTGATCGCTCAGCAGCAGAGTTCTATGTTCCAAATCCAAATCCCAACTACGTCAATAAGCTCTATCTTAACCATCCTGATAAGTTTCGACAGTACGGTCTCTGGGAAAGATACAGTGAATTGTATCCCGACGCAGACTTGGTTTACACCGTTGGCATTAGTGACTACACTAAGGATTGGTTCTTCGCTCAAGTCACCAGGAAGACAGAAAACGGAACATATAAGGGAACAACATGGCAAGTAAAGTTCGAGCTAGACAATGTCGACAACAAAGCAACTTACAAGCTTCGGATCGCATTGGCCTCCGCTTCTCTCGCAGAATTGCAGGTTGGAGTTAATGAGGCCAAGGCAAAGCCAGTGTTCTCGAGTGGACTGATCGGAAGGGACAATTCGATCGCGAGACACGGCATTCACGGCCTGCACTGGGTATACAACGTGGATATTCCGGGCAACCGGCTGGTTACCGGCGACAACACCATCTTCTTCACGCAACCTAGAAGCACAGGCCCTTTTCAAGCCATTATGTATGATTATATTCGTCTGGAAGCTCCTCCACCTCCTCCATCCTCCGCTCATCCTTTGGAATGATATTCCCACTAACGCACACATCTTTCCATATCCTTAATCCCTACCCACTTTTATGTTTCACTTTCTTTATATTCGATAATTAATTTCTTCGTCTACTTGTTTTTTAAAATTTATAAAATATCCCACGAGTGAAAATTAATATGCTAAGTTTAAATGCTAAATCTTACTTAAAAAAAAAT 3833 39.76 MPPLGVQLFITERQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNVLEVLNDESNRGYWDLVWNSSASTTGLFDVIKSTGFEVIVENEDQVELSFTRSWDLSLEGKLVPLEIDKRFIMLRGSSGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPELLGEVDDKYQYSCDNKDSGVHGWISTDPAVGFWLITPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGADEEWKKVFGPVFIYLNSTYDSTDALQLWEDAKAQATIEVQSWPYSFPASDDFPKLNQRGSISGRLLVRDSYVSGDLIPANGAFVGLAPPGDVGSWQRESKGYQFWSRADESGKFSIDGVRPDDYNLFAWVPGFIGDYRYDALIGITEGIEIDMDDITYEPPRQGATIWEIGIPDRSAAEFYVPNPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDADLVYTVGISDYTKDWFFAQVTRKTENGTYKGTTWQVKFELDNVDNKATYKLRIALASASLAELQVGVNEAKAKPVFSSGLIGRDNSIARHGIHGLHWVYNVDIPGNRLVTGDNTIFFTQPRSTGPFQAIMYDYIRLEAPPPPPSSAHPLE 642
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 35586119 35594417 - XM_039030284.1 Bhi04g01405 33014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01405 642 Pfam Rhamnogalacturonate lyase family 11 201 IPR010325 -
Bhi04g01405 642 CDD RGL4_N 13 293 - -
Bhi04g01405 642 SUPERFAMILY Galactose-binding domain-like 439 629 IPR008979 -
Bhi04g01405 642 CDD RGL4_C 443 629 - -
Bhi04g01405 642 Gene3D - 438 629 - -
Bhi04g01405 642 Gene3D - 7 298 IPR014718 GO:0030246
Bhi04g01405 642 CDD RGL4_M 332 431 IPR029413 -
Bhi04g01405 642 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 632 - -
Bhi04g01405 642 SUPERFAMILY Starch-binding domain-like 329 419 IPR013784 GO:0030246
Bhi04g01405 642 SUPERFAMILY Galactose mutarotase-like 19 292 IPR011013 GO:0003824|GO:0005975|GO:0030246
Bhi04g01405 642 Pfam Polysaccharide lyase family 4, domain II 355 425 IPR029413 -
Bhi04g01405 642 Pfam Polysaccharide lyase family 4, domain III 441 628 IPR029411 -
Bhi04g01405 642 Gene3D - 330 423 - -
Bhi04g01405 642 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 632 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi04g01405 Bhi09g02518 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00593 Bhi-Chr3:11514514 Bhi04g01405 Bhi-Chr4:35586119 0 dispersed
Bhi03g00594 Bhi-Chr3:11514514 Bhi04g01405 Bhi-Chr4:35586119 0 dispersed
Bhi04g01405 Bhi-Chr4:35586119 Bhi09g02523 Bhi-Chr9:68203664 0 dispersed
Bhi04g01405 Bhi-Chr4:35586119 Bhi04g01406 Bhi-Chr4:35586123 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01405 K18195 - csv:101215720 1214.52