Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01406 GATAAAGTCTACGGGTTTTGAGGTCATAGTGGAAAATGAAGACCAAGTGGAGCTCTCCTTTACCAGATCATGGGATCTGTCTCTCGAGGGAAAGCTTGTGCCTTTAGAGATTGATAAAAGCCATGTAGGTTTATAATGCTCCGGGGTTCGTCTGGGTTTTACTCCTACGCTATTTACCAACACTTGAAAGAATGGCCTGGTTTCAACCTTGGTGAAACCAGACTCGCCTTCAAACTCAGAAAGGACAAGTTCCACTATATGGCCATGGCAGACAACAGACAGAGATACATGCCGCTTCCAGATGATCGCTCTCCGCCGAGAGGTCGAGCCCTGGCATACCCGGAGGCTGTCCTGCTCGTCGACCCCATTGAACCAGAGCTCCTGGGAGAGGTGGATGACAAGTATCAGTACTCATGTGACAACAAAGATAGTGGCGTCCATGGATGGATATCCACCGATCCGGCAGTCGGATTCTGGCTAATCACCCCCAGCAATGAGTTTCGATCCGGTGGACCCGTTAAACAGAACCTTACTTCACACGTCGGCCCAACCACTCTAGCTGTTTTTATAAGCGCCCATTACACAGGAGAGGATTTGGTGCCGAAAATTGGAGCCGATGAGGAGTGGAAGAAAGTTTTTGGCCCTGTATTCATCTATCTCAACTCCACTTATGATTCCACCGACGCACTTCAACTCTGGGAAGATGCCAAAGCTCAGGCGACGATCGAAGTCCAAAGTTGGCCTTACAGCTTTCCTGCTTCGGATGATTTTCCAAAGTTAAATCAACGGGGCAGTATCAGTGGTAGACTATTAGTCAGAGATAGCTACGTTAGTGGAGACTTGATACCAGCAAACGGTGCGTTTGTTGGCCTGGCTCCACCAGGAGACGTTGGATCATGGCAACGAGAGAGCAAGGGTTACCAATTTTGGAGTAGAGCAGATGAAAGTGGAAAATTTTCCATCGACGGCGTAAGGCCCGACGACTACAATCTGTTTGCATGGGTCCCCGGTTTTATTGGAGATTATCGTTACGATGCTCTCATCGGCATTACAGAAGGCATTGAGATAGACATGGATGACATAACATACGAGCCTCCGAGACAAGGAGCTACAATCTGGGAAATAGGAATCCCTGATCGCTCAGCAGCAGAGTTCTATGTTCCAAATCCAAATCCCAACTACGTCAATAAGCTCTATCTTAACCATCCTGATAAGTTTCGACAGTACGGTCTCTGGGAAAGATACAGTGAATTGTATCCCGACGCAGACTTGGTTTACACCGTTGGCATTAGTGACTACACTAAGGATTGGTTCTTCGCTCAAGTCACCAGGAAGACAGAAAACGGAACATATAAGGGAACAACATGGCAAGTAAAGTTCGAGCTAGACAATGTCGACAACAAAGCAACTTACAAGCTTCGGATCGCATTGGCCTCCGCTTCTCTCGCAGAATTGCAGGTTGGAGTTAATGAGGCCAAGGCAAAGCCAGTGTTCTCGAGTGGACTGATCGGAAGGGACAATTCGATCGCGAGACACGGCATTCACGGCCTGCACTGGGTATACAACGTGGATATTCCGGGCAACCGGCTGGTTACCGGCGACAACACCATCTTCTTCACGCAACCTAGAAGCACAGGCCCTTTTCAAGCCATTATGTATGATTATATTCGTCTGGAAGCTCCTCCACCTCCTCCATCCTCCGCTCATCCTTTGGAATGATATTCCCACTAACGCACACATCTTTCCATATCCTTAATCCCTACCCACTTTTATGTTTCACTTTCTTTATATTCGATAATTAATTTCTTCGTCTACTTGTTTTTTAAAATTTATAAAATATCCCACGAGTGAAAATTAATATGCTAAGTTTAAATGCTAAATCTTACTTAAAAAA 1894 46.41 MLRGSSGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRYMPLPDDRSPPRGRALAYPEAVLLVDPIEPELLGEVDDKYQYSCDNKDSGVHGWISTDPAVGFWLITPSNEFRSGGPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGADEEWKKVFGPVFIYLNSTYDSTDALQLWEDAKAQATIEVQSWPYSFPASDDFPKLNQRGSISGRLLVRDSYVSGDLIPANGAFVGLAPPGDVGSWQRESKGYQFWSRADESGKFSIDGVRPDDYNLFAWVPGFIGDYRYDALIGITEGIEIDMDDITYEPPRQGATIWEIGIPDRSAAEFYVPNPNPNYVNKLYLNHPDKFRQYGLWERYSELYPDADLVYTVGISDYTKDWFFAQVTRKTENGTYKGTTWQVKFELDNVDNKATYKLRIALASASLAELQVGVNEAKAKPVFSSGLIGRDNSIARHGIHGLHWVYNVDIPGNRLVTGDNTIFFTQPRSTGPFQAIMYDYIRLEAPPPPPSSAHPLE 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 35586123 35591629 - XM_039030285.1 Bhi04g01406 33015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01406 527 Pfam Rhamnogalacturonate lyase family 1 86 IPR010325 -
Bhi04g01406 527 Pfam Polysaccharide lyase family 4, domain II 240 310 IPR029413 -
Bhi04g01406 527 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 517 - -
Bhi04g01406 527 CDD RGL4_N 1 178 - -
Bhi04g01406 527 Gene3D - 215 308 - -
Bhi04g01406 527 SUPERFAMILY Galactose mutarotase-like 21 177 IPR011013 GO:0003824|GO:0005975|GO:0030246
Bhi04g01406 527 CDD RGL4_C 328 514 - -
Bhi04g01406 527 Pfam Polysaccharide lyase family 4, domain III 326 513 IPR029411 -
Bhi04g01406 527 CDD RGL4_M 217 316 IPR029413 -
Bhi04g01406 527 Gene3D - 323 514 - -
Bhi04g01406 527 Gene3D - 3 184 IPR014718 GO:0030246
Bhi04g01406 527 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 517 - -
Bhi04g01406 527 SUPERFAMILY Starch-binding domain-like 214 304 IPR013784 GO:0030246
Bhi04g01406 527 SUPERFAMILY Galactose-binding domain-like 324 514 IPR008979 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01406 Bhi-Chr4:35586123 Bhi09g02523 Bhi-Chr9:68203664 0 dispersed
Bhi04g01405 Bhi-Chr4:35586119 Bhi04g01406 Bhi-Chr4:35586123 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01406 K18195 - csv:101215720 995.727