Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01409 GGGTTGGGTGGGTTAATTGCGAATGTCAGAGAAGGGACCAATGGCTTCTCTAACCTGCCTTCTTCTGTATATGTGTCTCTCACAATACACAGAACAAAATCTTGGAATTGCCCTTCTCTAAATCCAGCCTGTAGCGTAGTAGTATTACCGAGTGAGAGAGAGAGACACACACACCCACTCCATTTCTTTTCTATCACTTTCGTTTTCCCCTTCTTCTGATTCCTTATATGTCCCTTCTTCATCTTCTTTCTCTCTCCCTCTTCCCCACTTTAACCTAAAAAGCCTCGCCTTTTTCACCTCCTTCATAAGCTCCCTTCTCTTTTCCCAGTCTTTTCAGGCCCCAACTTGCAGAAACGGAGGTGGAGGGGAAGAAACAAACAGATTACAGTGTAAAAAAAGAAGAAATAACTTAAACCAAGAACAACAACAACAAGGCCCTCTATCTGCTTCTCTGCTCTCTGTTACACAATAACTTTTTTGTTCTTATTGCCTTCAAATCCAATTCTTTGTTAAAAAAATAGATAAACAAAAAAACCCATCTTCTTCTTATTATTCTTCACAATCAACACAATCATCATCATCATCTGAAAATCTCTTCAATTTTATATAATCAGGCGGCTTCTGGCCTCTGTTTTGGAACAGAGAGAGGGGAAGAGAAAAGGGGAAAAGGGATTTTTTTAGCAATGGCTCCTAGTTTTGACCTTGCTGTTTCTAACCTTTTATGTGCTGAAGAGAATTGCATTTTCGACAATAACGATGATGATGATGAAACAGTAGTTGAGGAGTTTGTGATGGCTCCTTATTATCTTAGAACTCGTTGGAACCGGAACCCTCACCGCGGCGGCGGCGGTGACGATGGGTTGCCGTTTATGAGCGATGAATGTTTGATTGAAATGGTTGAAAAGGAAACCCATCACTTGCCTGTTGATGGGTACTTCATGAAGTTGCAGAACGGCGAGTTGGATGTTGGAGCAAGAAAAGAGGCCGTCGATTGGATTCAAAAGGTAAGTGCTCATTTCAGTTTTGGATCTCTCTGTACATACTTAGCCGTAAACTACTTGGATCGATTCCTCTCCGCTTACGATCTACCCAAAGGCAAAGCATGGACAATGCAGTTGCTTGCTGTGGCATGTTTGTCCCTTGCAGCCAAATTGGAGGAGACTGAAGTCCCCCTCTCTTTGGATTTACAGGTGGGTGGATCAAAATTTGTGTTTGAAGCAAGAACCATTGAAAGAATGGAGCTTTTAGTCTTGACAACATTGGGATGGAGAATGCAAGCAGTTACACCCTTCTCATTTATTGATCATTACCTCCGCAAGATTATCGAGGACGAACTCTCTATCAAAATGTTGATCACCCGATCCATTCATCTACTGTTGAACATAATACAAGGGATTGACTTCTTGGAATTCAAACCTTCTGAAATTGCAGCAGCTGTGGCAATATCAGTATCTGGGGAAGCTCAATCAGTGGACCCTGAGAGAGCAATTCCTCTTCTCATTCAGCAACTCCAAATGGAAAGAGTTCTGAAGTGTCTTAAATTAATCAATGACATGTTCTTAATCTGTGAGGGTGGGACGGTGAAGGACTCGAGAGTGTTGATAACGGAGCCCCGGAGCCCGAGTGGGGTGTTGGACGTGACATGTTTAAGCTATAAAAGCAATGATACAGCAGTTGGATCATGTGCAAACTCTTCTCATCATAACAGCCCAGAGGCTACAAAGAGGAGGAGACTGAACAGACCCTGCGAAGTGGAGCTATAGGAAAAAAGGGGTGATGGGAGGTGTGATCTTCCAATCCTAAAGTAAATTTTTGATGAGGTTTTTTTAGGGAAAAAAACGTCAGTTATTGAAAGGATAATTTTAAAAACACAGAAAAGGAGTAGAAGAAGAGGAATGCAGAAGCAAAGTCCCCAATCTGTTTCTTTCTGTGATGAAAGAGGAGGAAGAGGAGGAATTTGGGTGTGGGAATTGGGAAGTGTTTAATTTTGAGATACACTTTCTTTCTAGGTGTCAATTTTTATTGGTTGAGACCAAAAAATGAAAAGAGAAAAAAAAAAAAACAAAAGGATGCCCAAAGAAATAGTGGGGCAAAAAGGAAAAAAAAAGTGGAAAAAATTTGTCTAATTTCATATAAATTTTGGAATTGTTTAATATATCTTCTGTTGAGTCATTTAAACAGTGTTTTTTAAAACTCACTATGGGGCAGAGAGTCTGCAGCCCTTTGTTTGACCATTTGTCTACTATGACTGGGTTTTGCCTCTTTGCTTATATATGGTAAAAGCCCATTCATTTAATAATAAAATAAATAAATAAATAAAACAAGGATAGGGGAAGAATATTTTCGAGAA 2350 40.13 MAPSFDLAVSNLLCAEENCIFDNNDDDDETVVEEFVMAPYYLRTRWNRNPHRGGGGDDGLPFMSDECLIEMVEKETHHLPVDGYFMKLQNGELDVGARKEAVDWIQKVSAHFSFGSLCTYLAVNYLDRFLSAYDLPKGKAWTMQLLAVACLSLAAKLEETEVPLSLDLQVGGSKFVFEARTIERMELLVLTTLGWRMQAVTPFSFIDHYLRKIIEDELSIKMLITRSIHLLLNIIQGIDFLEFKPSEIAAAVAISVSGEAQSVDPERAIPLLIQQLQMERVLKCLKLINDMFLICEGGTVKDSRVLITEPRSPSGVLDVTCLSYKSNDTAVGSCANSSHHNSPEATKRRRLNRPCEVEL 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 35696122 35699314 + XM_039030706.1 Bhi04g01409 33018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01409 359 Pfam Cyclin, C-terminal domain 200 292 IPR004367 -
Bhi04g01409 359 Gene3D - 81 198 - -
Bhi04g01409 359 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 351 - -
Bhi04g01409 359 Pfam Cyclin, N-terminal domain 71 197 IPR006671 -
Bhi04g01409 359 CDD CYCLIN 98 190 IPR013763 -
Bhi04g01409 359 SUPERFAMILY Cyclin-like 62 197 IPR036915 -
Bhi04g01409 359 SMART Cyclin_C_2 200 325 IPR004367 -
Bhi04g01409 359 SMART cyclin_7 103 191 IPR013763 -
Bhi04g01409 359 PANTHER CYCLINS 1 351 IPR039361 -
Bhi04g01409 359 MobiDBLite consensus disorder prediction 332 353 - -
Bhi04g01409 359 Gene3D - 70 281 - -
Bhi04g01409 359 SUPERFAMILY Cyclin-like 183 295 IPR036915 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01149 Bhi-Chr3:23219008 Bhi04g01409 Bhi-Chr4:35696122 6.36E-106 dispersed
Bhi04g00381 Bhi-Chr4:9350821 Bhi04g01409 Bhi-Chr4:35696122 9.90E-56 dispersed
Bhi04g01409 Bhi-Chr4:35696122 Bhi11g01121 Bhi-Chr11:32717102 8.03E-57 dispersed
Bhi04g01409 Bhi-Chr4:35696122 Bhi01g01689 Bhi-Chr1:35769856 4.47E-50 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01409 K18810 - csv:101216206 619.772