Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01479 TATTTATTTATTTTTTAAAAAATTTTGTTCTTCGTCCTTGCCACCGATTGGAAGAAGAACAACAACATTGTAATTAACAAAAGACCCTTTTTGATTGGATTTGAGGATTAGAAGGGGAAGGATTTGGAACATCATGGATTGCTTTGTGGATTTGTGATGTTGAAGAGGAAAAAGAAGGTGAAGAAGAAGAAAGGGAAGTCTCTACAGTTGACGAGCTGAGAAATTAGAAAGGAATTCTAAAGAGGGAAATTGATGGGCCTATCAGATTTCCAAGTTCAAATTTCTCCTTATAATTGGTGGCTTGATCCAGTGTAGTTGACCAGATCTGAATGTTCATTTCATTTTTCCCTCACTTTTTTAGGCCTTCCACGTGTTGCTTCCCCTGACTTGGCTTCCTACTTTGGGTCTTATCAAGTTTCTTACGGATGGAAAATGGTTTGTTCAACCCCAACATTCACATTCCAAGATCATTCTTAATGACAGAAAAAGGCGGTGGATTAGTTGAAATATGACAGGTCTTGTTATTTTAGAGGGGTTAGGGGGTAACTTTTATCATTGCTTAGGTAGAGAATTTGATGGAGGAAATGTCCCCAGCGGTTGTGGTGCCATTTAGGGTAGGTAATTCAGTCTGTGATAACCCCAACATGGCAACCCCCATGGATATCACAAGACTTAAGCTAATGGCAGATACTGCTGGTTTGTTATCTGATTCTGTGACTAAGGCTTCTGATGACCTGACTGAAGTAGGTTCTGATGATTGTAAGAGTTCTAATGGGGAGGAAGAGGTTGGTATTACTACAGTTTCGGTTACGAATGACAAGTGCGAAGGAGTTCCATTGTCAGTTGTGTTATCTCAAAATAATAGCAGTTGGGTTGCGGAAAATGAGTCGATATCCCATGGAAGTGAGGAAGATGATTCTTTATCTTTAGAGGGCGATCACATTTATGATAGCTCTTGTTCGCATTCAGTGATTAGTGAGAATAGCAGTATTTGTGGTGATGATTTTTTAGGTTCTGAGGTATCTTCTTTTGAAGCATTTGATTCCATCAGCAATGCAAAGGACATTAGCAGCGTTGAGATTGCAGCTAAAGCCAATATTGAAGAGACTAATGTCGAAAGTCTTGACACTCAGATTGCGAGTTCTTCTTCTGCAGCAGCTAGCCTTGAAGAAGATGTTGGAGATGGGCTAGGCACTGAAGCATGTAATAACATGGTTCTTCAGCTTCCTCTTGAGAAAAGGGCAAGCGAACCAGTCGGTCGAAGTGTTTTTGAGGTAGATTGTGTTCCCCTTTGGGGATTTACGTCGGTCTGTGGAAGAAGACCCGAGATGGAAGATGCAGTGGCAACTGTACCGAGGTTTTCGGAACTTCCAGTCCAAATGCTTGTTGGTGACCGAGTTCTTGATGGCTCAAACAAGGCTATAGCTCACCAAACCGTTCATTTTTTTGGGGTTTATGATGGTCACGGTGGATCTCAGGTCGCAAATTTTTGTCGTGAACGTATGCATTTGGCTTTATCTGAGGAGATAGAATTGGCTAAGCAAGATATAGCTGTTGGCAATATGAAGGATAATTGCCAAGAGCTATGGAGAAAGGCATTCACCAAATGTTTTCTAAAAGTTGATGCTGAAATTGGAGGGGGAACTGGTGTTGAGCCTGTTGCGCCAGAAACTGTAGGCTCCACTGCTGTTGTTGCAATTATCTGTGCCTCTCACATTATTGTTGCAAACTGTGGAGACTCAAGAGCAGTTCTTTGTCGTGGGAAGGAGCCAATGGCATTGTCTGTGGATCATAAACCAAACAGAGAAGATGAATATGAAAGGATTGAGGCCGCGGGAGGAAAGGTCATACAGTGGAACGGGCACCGTGTTTTTGGTGTTCTTGCAATGTCGAGATCCATTGGTGATAGATACTTGAAACCATGGATCATCCCAGAGCCAGAAGTGATGTTCCTCCCTCGGGCGAAAGACGACGAATGCCTCGTTCTAGCGAGTGATGGTTTATGGGATGTGATGACAAATGAAGAGGTATGCGACTTGGCTCGAAGACGAATCCTACTCTGGCACAAGAAGAATGGCGTCAGTTTGCCTTCTGAGAGGGGGCTGGGGATCGATCCTGCAGCCCAAGCAGCCGCAGAATACCTCTCAAACCGAGCTCTTCAAAAGGGCAGCAAAGACAACATCACAGTAATCGTGATCGATTTGAAAGCTCAAAGGAAGTTCAAGACAAAATCATAACGAAATCATTCTTCCTCTTTTTAGTTGTACTTGTACCATATTATTGTTATGATTTATGAGACAAGGAAACACGATGATATTAATGTTCGCCCGACTATTTTTCTTCGGGGCATTATGATATTAATGATATGAATGTGAAGGAAGTATGCAGCATTCTAGAATCTCCATGGCACTAAGAGCATTTGTTATAAGCTCTTCAGTCCTGATGAGTTCTGGCAATGTAAATGACTGCTGCAGCAATGTGATAGAATAGGTGAAACAAACTGGGAAACCCTTCCACTTTTATGCACTATTTTCTTTGTATCAATTCGTACTCTTGGTGCTTATTATAAAGAATTAGCAGAAATTGAGGCTTTTCTTTTGTTA 2603 41.76 MEEMSPAVVVPFRVGNSVCDNPNMATPMDITRLKLMADTAGLLSDSVTKASDDLTEVGSDDCKSSNGEEEVGITTVSVTNDKCEGVPLSVVLSQNNSSWVAENESISHGSEEDDSLSLEGDHIYDSSCSHSVISENSSICGDDFLGSEVSSFEAFDSISNAKDISSVEIAAKANIEETNVESLDTQIASSSSAAASLEEDVGDGLGTEACNNMVLQLPLEKRASEPVGRSVFEVDCVPLWGFTSVCGRRPEMEDAVATVPRFSELPVQMLVGDRVLDGSNKAIAHQTVHFFGVYDGHGGSQVANFCRERMHLALSEEIELAKQDIAVGNMKDNCQELWRKAFTKCFLKVDAEIGGGTGVEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKEPMALSVDHKPNREDEYERIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAKDDECLVLASDGLWDVMTNEEVCDLARRRILLWHKKNGVSLPSERGLGIDPAAQAAAEYLSNRALQKGSKDNITVIVIDLKAQRKFKTKS 553
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 36821451 36826633 + XM_039030554.1 Bhi04g01479 33088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01479 553 CDD PP2Cc 241 543 IPR001932 -
Bhi04g01479 553 Gene3D - 226 553 IPR036457 -
Bhi04g01479 553 SUPERFAMILY PP2C-like 236 544 IPR036457 -
Bhi04g01479 553 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 121 552 - -
Bhi04g01479 553 ProSitePatterns PPM-type phosphatase domain signature. 290 298 IPR000222 GO:0043169
Bhi04g01479 553 ProSiteProfiles PPM-type phosphatase domain profile. 239 543 IPR001932 -
Bhi04g01479 553 SMART PP2C_4 229 541 IPR001932 -
Bhi04g01479 553 Pfam Protein phosphatase 2C 267 536 IPR001932 -
Bhi04g01479 553 PANTHER ALPHABET, ISOFORM E-RELATED 121 552 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01479 Bhi-Chr4:36821451 Bhi04g01481 Bhi-Chr4:36821617 0 dispersed
Bhi08g00562 Bhi-Chr8:18887721 Bhi04g01479 Bhi-Chr4:36821451 7.40E-80 dispersed
Bhi04g01478 Bhi-Chr4:36821451 Bhi04g01479 Bhi-Chr4:36821451 0 tandem
Bhi04g01479 Bhi-Chr4:36821451 Bhi04g01480 Bhi-Chr4:36821451 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01479 K14497 - csv:101207918 1048.11