Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01497 AACAAACTCATCAGAGAAGGAAAAAAAAAAAAAAAAAAAAAAGTAGAGAGAAAATTAATGGCAGAAAGTAGAAGAAAGAGACTTGATGAAGCCGCCATTGAAGGAAACGTAACGACGTTGTTAGAGTTACTCCAACAAGATCCAATGTTACTTGCCAGACTCAACCTCAACGACTTCAACGAGACTCCTCTGCACGTGGCTGCTCTTCATGGTCACGTGACATTTGTGGACGAGATTCTCAAGCGAAGGCCTCAGCTGGCCAAAGACTCGGATTCTCGCCATTGTTCCGCCCTCCACTGTGCCGCCGCCGAAGGGTTTTTAGACATTGTCAAAATTCTGGTGCGAGTTGATCCTGATATGTGTTCTATCTGCAACGAAGATGGGCGCAACCCTATTCACCTTGCCGCCATCAAAGGCCGGGTCGATGTCTTGGCCGAGCTCGTTCGAGTCAGACCCACAGCTGCTCGAACTGCAGTGGACGACGGCGGAACGGTGTTGCATTTATGTGTGAAGTACAAACAGCTGGAGGCTCTCGAGATGTTGATTGAAACTATGGCAGTGAAAGACGGTGATTTTATCAATACTCAGGATGATTACGGCTTCACTATCCTTCATTTAGCCGTCTCCAACAAACAACTTCAGATAGTACAATATCTAATCAACCATACTGGAATCGAAGTAAATGCAAAAACTTCAAATGGGTTAACAGCTCTTGACATTCTAACTCAAAGCCATAGAGAATTAAAGGACATGGACATTGCAGAAGCTCTCATAGCCGCCAATGCCGTCCGAACCACAAACAAACAACCATCGTCGCCGTCTTCTCGTGTCAGGAAAAACAAAAAGACAGGTCTTAGATGGGCTTTTTCAGCCTTATTCCACAATGGAGATTGGTGGTTTAAGAACGAAACAAGCGGGTGGTTAATGAAGCAAGAATCACTAATGGTTGTAGCATCCCTAATTGCAACAATGGCTTTTCAAGCTGGAATGAACCCTCCCGGTGGGATTTGGCAAGACGATAATGCATCGGGAAATCCAAGACAGACGGCAGGAACATCGGTAATGGCCGGAAAGGACAAAGCAACATACAATAAGTATCTTTTGTCTAACACAGTAGGGTTCATGACTTCATTCATTGCAATTGTGATGATTCTCATTGGGTTGCCTCAAAAACGTATTTGCATGAGGGTTTTGATCATGACTATGTGTGCTGCTGTGTGTTCCATGGCTTTCACTTATGGATATTCCATAAGGTTTTTCACTCCACTACCACAACCTGCAACCTCCAACTCCAATTCTCTGGCTCCATCTCCACAACTTGCAGGAGGTTCTATCTCCGGTACTCCGCGGCTAAAGTCGGACTCCGTCATCTCTTTGATTTCGTTTATTGTCGCTGCCGTTGTGACTTCTTCCATGGTACTTTTCTTGGTTGGGAAGCTCTTCTACGTTCATTCTCGACAGAATAAATCTACTGAAAACCCAGATACTCCTCCGCTATGATATATAATTCTGCTCTCCGCTAGCAGTCAAGTATTGCTCCCTTTTAGTTCTACACATCCTGGTTCCAAAATTGGCCAGACAATAGATATCCTATTTATAATGTTTTTCTTTATTGTTTCTCATTTGTTCCAAAATTGGCCAGACAAAAGAACTGTTTATAATGTTTTTGTTTCTTTTTTCGATTCAATCAGAAAAATATCAGCGTACTAAGTATTTGGTAATAGTTCTTTTTTAACTTATAT 1742 42.82 MAESRRKRLDEAAIEGNVTTLLELLQQDPMLLARLNLNDFNETPLHVAALHGHVTFVDEILKRRPQLAKDSDSRHCSALHCAAAEGFLDIVKILVRVDPDMCSICNEDGRNPIHLAAIKGRVDVLAELVRVRPTAARTAVDDGGTVLHLCVKYKQLEALEMLIETMAVKDGDFINTQDDYGFTILHLAVSNKQLQIVQYLINHTGIEVNAKTSNGLTALDILTQSHRELKDMDIAEALIAANAVRTTNKQPSSPSSRVRKNKKTGLRWAFSALFHNGDWWFKNETSGWLMKQESLMVVASLIATMAFQAGMNPPGGIWQDDNASGNPRQTAGTSVMAGKDKATYNKYLLSNTVGFMTSFIAIVMILIGLPQKRICMRVLIMTMCAAVCSMAFTYGYSIRFFTPLPQPATSNSNSLAPSPQLAGGSISGTPRLKSDSVISLISFIVAAVVTSSMVLFLVGKLFYVHSRQNKSTENPDTPPL 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 36946928 36948872 + XM_039029639.1 Bhi04g01497 33106

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01497 480 Pfam Domain of unknown function 291 398 IPR026961 -
Bhi04g01497 480 PANTHER - 7 403 - -
Bhi04g01497 480 ProSiteProfiles Ankyrin repeat region circular profile. 108 130 - -
Bhi04g01497 480 ProSiteProfiles Ankyrin repeat region circular profile. 180 203 - -
Bhi04g01497 480 PANTHER CASKIN 7 403 - -
Bhi04g01497 480 SMART ANK_2a 180 210 IPR002110 GO:0005515
Bhi04g01497 480 SMART ANK_2a 40 69 IPR002110 GO:0005515
Bhi04g01497 480 SMART ANK_2a 74 103 IPR002110 GO:0005515
Bhi04g01497 480 SMART ANK_2a 108 137 IPR002110 GO:0005515
Bhi04g01497 480 SMART ANK_2a 4 33 IPR002110 GO:0005515
Bhi04g01497 480 SMART ANK_2a 214 249 IPR002110 GO:0005515
Bhi04g01497 480 SMART ANK_2a 142 171 IPR002110 GO:0005515
Bhi04g01497 480 Gene3D - 2 294 IPR036770 -
Bhi04g01497 480 ProSiteProfiles Ankyrin repeat profile. 180 203 IPR002110 GO:0005515
Bhi04g01497 480 ProSiteProfiles Ankyrin repeat profile. 40 72 IPR002110 GO:0005515
Bhi04g01497 480 ProSiteProfiles Ankyrin repeat profile. 108 130 IPR002110 GO:0005515
Bhi04g01497 480 SUPERFAMILY Ankyrin repeat 10 239 IPR036770 -
Bhi04g01497 480 Pfam Ankyrin repeats (3 copies) 142 211 IPR002110 GO:0005515
Bhi04g01497 480 Pfam Ankyrin repeats (3 copies) 11 96 IPR002110 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01497 - - - bhj:120075898 946.036
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02748 Bhi-Chr1:67961572 Bhi04g01497 Bhi-Chr4:36946928 6.74E-62 dispersed
Bhi04g01497 Bhi-Chr4:36946928 Bhi09g00184 Bhi-Chr9:4129694 5.48E-09 dispersed
Bhi12g00943 Bhi-Chr12:28514996 Bhi04g01497 Bhi-Chr4:36946928 1.40E-23 dispersed
Bhi04g01495 Bhi-Chr4:36879380 Bhi04g01497 Bhi-Chr4:36946928 1.94E-70 proximal
Bhi04g01497 Bhi-Chr4:36946928 Bhi04g01498 Bhi-Chr4:36965689 1.31E-16 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g137 . . . . . . . . . . . . . . Sed08g1788 . . Bhi04g01497 Tan02g1599 Cmetu03g0638 . Hepe08g1418 . Lcy13g2206 . . . . . . . . . . . . . . . . Blo18g00266 . . . . . Bma02g00544 . . . . . . . . . . . . . . . . . . . . . . . Lsi08g00846 . Chy03g00665 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002621 0 1 10 2 1 1 1 1 1 1 1 1 1 3 1 2 1 0 1 1 1 1 3 6 4 4 2 1 3 2 58
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi04g01497 Bhi_Chr04 FPKM 32.173756 32.250648 6.430981 5.501615 2.063855 1.706719 2.388041 5.687436 4.81366 5.856074