Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01632 CACTTTTACCCTCTTCAACGACTTCACTTCACATAGACGTTCTTCACCAATTTCCCCCTTTTCTCTCTCTCTCTCTCTCCGGAGAGAGAAAACCCACCGGCGACCGCCATTTCCGACCAACCATGCTCTTGAAGCCCTCCAACACCGTTGCCGTCGTATTCATGCTCGCTTTCGCATTATTCATCATCTTCTTCACTGGCTTCCTCGAATTTCCACCAGCATCCACTTCCATCGTACCGCCCACCGACGATCTGAATCTCTCCGCACCCCAATTCGCTTCCGACCCTTTCACTGATTTGATCATCGCCTTCAAGAAATGGGATTCTCAGGTGGGTTGTGATCGGTTCCGGGAGAAAATTAGCGGCGGTTTGAGCAATGGGTCTTCGTCAGTTTCGCTGCAGCAAGTCGGCGGCGACTCTAATTCGGAATGTGGGGGGCTGAAACTGAATCATGTTGCTGTTTTGGTGAAAGGATGGACTTGGATTCCTGATAATTTAGACAATTTGTATTCGTGTTCTTGTGGATTGAGCTGTCTTTGGACTAAATCTTCTGTTCTTGCCGATAAACCTGACGCCTTGTTATTCGAAACCAGTACGCCTCCGCGGCAGAGGCACAGAGGAGATCCGCTTCGCATATATATGGATCTCGAGGCTGGTCGGAAGCGCTCAGGTTTGGAGGATCTATTTGTTAGTTATCATGCAGACGATGATGTTCAGTCAACTTATGCAGGAGCACTCTTTCACAATGGTCGAAACTATCACGTATCTTCTAAAAAAAACAATGATACACTCATTTATTGGTCGTCGTCTCGTTGTCTTCCCCAAAGAAATCAGCTTGCTAAGAAGCTTCTAAGTTTGCTGCCTCATCATTCATTTGGCAAGTGCTTGAACAACGTAGGTGGACTCGATATGGCCCTTTCGATGTACCCTGAATGTGCAAATGATGGCAGTGTCACCCCAAAATGGTGGGATCACTTGCATTGTGCAATGTCTCACTACAAATTCGTTCTCGCAATTGAAAACACAATGACTGAGAGTTACGTAACAGAGAAGCTATTTTATGCGCTAGACTCTGGTTCGGTTCCGATCTATTTTGGTGCCCCTAATGTTTGGGACTTTGTTCCTCCACATTCTATAATTGATGGATCTAAATTCAGCTCCTTGGAAGAGTTAGCTTCTTATGTAAAGCGACTTGCGGATGATCCAGTAGCTTATGCCGAGTACCATGCTTGGAGACGATGCCGTGCATTGGGTAACTATAGAAGGACCCGAGCTGCAAGCCTCGACACGCTGCCATGCCGTGTGTGTGATGCTGTGAGCAGAAGGGGTGGTAGAAATGGCTGAGCTCATCCAGTTTCTTTTTTTTGGTTTCCATTGTTATACTGTTGTTTATCAATGTGAATTGGAATCTCCATTTCTAATTGCCTTTGTTTTTGTTGTCACCAGTAGACAGGGGAATGAGTTGCTGTATAAGGAAATTAGTGTAGGTAGAAAGATCATAAATGATGAGAGAAAAATGTATTTGATTTATGTTATATTACACACTTTAGAAAAAATTTATAATT 1564 44.63 MLLKPSNTVAVVFMLAFALFIIFFTGFLEFPPASTSIVPPTDDLNLSAPQFASDPFTDLIIAFKKWDSQVGCDRFREKISGGLSNGSSSVSLQQVGGDSNSECGGLKLNHVAVLVKGWTWIPDNLDNLYSCSCGLSCLWTKSSVLADKPDALLFETSTPPRQRHRGDPLRIYMDLEAGRKRSGLEDLFVSYHADDDVQSTYAGALFHNGRNYHVSSKKNNDTLIYWSSSRCLPQRNQLAKKLLSLLPHHSFGKCLNNVGGLDMALSMYPECANDGSVTPKWWDHLHCAMSHYKFVLAIENTMTESYVTEKLFYALDSGSVPIYFGAPNVWDFVPPHSIIDGSKFSSLEELASYVKRLADDPVAYAEYHAWRRCRALGNYRRTRAASLDTLPCRVCDAVSRRGGRNG 406
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 40566136 40569527 - XM_039029687.1 Bhi04g01632 33241

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01632 406 Gene3D - 171 379 IPR038577 -
Bhi04g01632 406 PANTHER ALPHA-(1,4)-FUCOSYLTRANSFERASE 13 405 - -
Bhi04g01632 406 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 220 401 IPR001503 GO:0006486|GO:0008417|GO:0016020
Bhi04g01632 406 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 13 405 IPR001503 GO:0006486|GO:0008417|GO:0016020
Bhi04g01632 406 PIRSF FucT_plant 1 406 IPR017177 -
Bhi04g01632 406 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 100 400 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01632 K14412 FUT13, FucTC; alpha-1,4-fucosyltransferase [EC:2.4.1.65] - csv:101216230 777.319
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01632 Bhi-Chr4:40566136 Bhi05g01064 Bhi-Chr5:38443637 1.56E-14 dispersed
Bhi04g01632 Bhi-Chr4:40566136 Bhi05g01063 Bhi-Chr5:38443637 1.17E-14 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi07g01534 . 100 565 Xyloglucan Fucosyltransferase1 AT1G14080 57.5 1.8e-155 547.0
Bhi07g01534 . 80 566 Xyloglucan Fucosyltransferase1 AT1G14100 58.7 4.0e-165 578.9
Bhi07g01534 . 101 570 Xyloglucan Fucosyltransferase1 AT1G14110 53.9 1.2e-136 484.2
Bhi05g01063 . 34 546 Xyloglucan Fucosyltransferase1 AT1G49710 64.2 5.9e-193 671.4
Bhi01g01672 . 1 514 Xyloglucan Fucosyltransferase1 AT1G49710 62.5 3.0e-184 642.5
Bhi01g01671 . 1 435 Xyloglucan Fucosyltransferase1 AT1G49710 63.0 1.3e-152 537.3
Bhi05g01064 . 128 455 Xyloglucan Fucosyltransferase1 AT1G49710 75.1 7.6e-148 521.5
Bhi04g01632 . 7 405 Xyloglucan Fucosyltransferase1 AT1G71990 69.9 3.6e-169 592.0
Bhi07g01534 . 6 566 Xyloglucan Fucosyltransferase1 AT2G03210 56.7 2.4e-182 636.3
Bhi01g03067 . 20 501 Xyloglucan Fucosyltransferase1 AT2G03210 51.1 1.7e-140 497.3
Bhi07g01534 . 36 566 Xyloglucan Fucosyltransferase1 AT2G03220 64.5 3.5e-199 692.2
Bhi01g03067 . 15 501 Xyloglucan Fucosyltransferase1 AT2G03220 52.6 1.9e-152 537.0
Bhi07g01534 . 101 565 Xyloglucan Fucosyltransferase1 AT2G15350 54.9 6.7e-152 535.0
Bhi07g01534 . 101 565 Xyloglucan Fucosyltransferase1 AT2G15370 54.4 4.3e-146 515.8
Bhi07g01534 . 92 565 Xyloglucan Fucosyltransferase1 AT2G15390 54.9 5.0e-150 528.9
Bhi05g01063 . 34 546 Xyloglucan Fucosyltransferase1 AT3G19280 63.5 7.1e-191 664.5
Bhi01g01672 . 1 514 Xyloglucan Fucosyltransferase1 AT3G19280 64.3 4.0e-186 648.7
Bhi01g01671 . 1 436 Xyloglucan Fucosyltransferase1 AT3G19280 64.8 2.0e-153 540.0
Bhi05g01064 . 128 455 Xyloglucan Fucosyltransferase1 AT3G19280 76.8 1.9e-151 533.5
Bhi07g01534 . 6 566 Xyloglucan Fucosyltransferase1 AT2G03210 56.7 2.4e-182 636.3
Bhi01g03067 . 20 501 Xyloglucan Fucosyltransferase1 AT2G03210 51.1 1.7e-140 497.3
Bhi07g01534 . 36 566 Xyloglucan Fucosyltransferase1 AT2G03220 64.5 3.5e-199 692.2
Bhi01g03067 . 15 501 Xyloglucan Fucosyltransferase1 AT2G03220 52.6 1.9e-152 537.0
Bhi07g01534 . 6 566 Xyloglucan Fucosyltransferase1 AT2G03210 56.7 2.4e-182 636.3
Bhi01g03067 . 20 501 Xyloglucan Fucosyltransferase1 AT2G03210 51.1 1.7e-140 497.3
Bhi07g01534 . 92 565 Xyloglucan Fucosyltransferase1 AT2G15390 54.9 5.0e-150 528.9
Bhi07g01534 . 101 565 Xyloglucan Fucosyltransferase1 AT2G15370 54.4 4.3e-146 515.8
Bhi07g01534 . 100 565 Xyloglucan Fucosyltransferase1 AT1G14080 57.5 1.8e-155 547.0
Bhi07g01534 . 80 566 Xyloglucan Fucosyltransferase1 AT1G14100 58.7 4.0e-165 578.9
Bhi07g01534 . 101 570 Xyloglucan Fucosyltransferase1 AT1G14110 53.9 1.2e-136 484.2
Bhi07g01534 . 101 565 Xyloglucan Fucosyltransferase1 AT2G15350 54.9 6.7e-152 535.0
Bhi05g01063 . 34 546 Xyloglucan Fucosyltransferase1 AT3G19280 63.5 7.1e-191 664.5
Bhi01g01672 . 1 514 Xyloglucan Fucosyltransferase1 AT3G19280 64.3 4.0e-186 648.7
Bhi01g01671 . 1 436 Xyloglucan Fucosyltransferase1 AT3G19280 64.8 2.0e-153 540.0
Bhi05g01064 . 128 455 Xyloglucan Fucosyltransferase1 AT3G19280 76.8 1.9e-151 533.5
Bhi05g01063 . 34 546 Xyloglucan Fucosyltransferase1 AT1G49710 64.2 5.9e-193 671.4
Bhi01g01672 . 1 514 Xyloglucan Fucosyltransferase1 AT1G49710 62.5 3.0e-184 642.5
Bhi01g01671 . 1 435 Xyloglucan Fucosyltransferase1 AT1G49710 63.0 1.3e-152 537.3
Bhi05g01064 . 128 455 Xyloglucan Fucosyltransferase1 AT1G49710 75.1 7.6e-148 521.5
Bhi04g01632 . 7 405 Xyloglucan Fucosyltransferase1 AT1G71990 69.9 3.6e-169 592.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010578 1 1 1 1 1 1 2 1 1 0 0 1 2 1 1 2 1 2 2 1 1 1 1 1 1 0 1 1 1 1 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi04g01632 Bhi_Chr04 FPKM 2.556373 3.772319 2.979699 4.311291 3.860969 3.34983 3.043877 1.868238 3.63223 3.274443