Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01737 CTCTCCAAATTACATCAATTTTCCTGAAGAAACAAAAGAAAGAGCTTAATTACAACACTTTCCTCAGAGATTCTGCAGATTACAACACAGCCTCTGTTCATATAATTCCAGTTCTATAGCTAGCTTACAGATGAGGCACAATTCCAAGAATCAACCTCAGCTTTTCTGGCCGAGAGTGGTCTTGCGCAAATGGCTCAATATCAGCGCTAAAGAGTCGGATTACAGTGCCGATACCGAAGATGATGAAGATGTGAATTCTTCCGATTCTGAGACTGAAGCAGAATGTCGTTTTAGGGGAAGAGAATCACGCTTTAAGGTAGACAACAGTAACAGAGATGAACCACTGGTTGATGCTAATGATGTGCTGCCGAGGTTGAGAAGAAGAAATTCAGAAACATTTAGGACACAATATATCAACACAAAAGAACTCAGAATATGTGTTGGGACTTGGAATGTTGGAGGAAAACTACCTCCTGAAGATCTAGATATTGATGGCTGGATAGATACCAATGAGCCGGCTGATATCTATGTCCTTGGTCTCCAGGAGATTGTCCCATTGAATGCTGGAAATATATTTGGTGCTGAAGACAGTCGCCCAATTGCAAGGTGGGAAGATATTATCCGCGAAACATTGAATAGGGTTAGACCTGCTACAACCAAGATTAAGTGCTTTAGTGATCCACCATCTCCATCAAAGTTTAAGCCATCTGACGACATCCCAGATTTAGAGGAGGAGATTCTGCAGGAAAGTGATAGTGACATTGGTGAGGAAGTGCATCCATGTGATGAAGAATTCTTTGGCAAGGAAAATGTCGATGGACTAGTAGGTGATACAAATCTAAGCTTGAAATTCCCACTTTCTGAACTTTCTGCAAATACCAAATCAGGGATACTTGTAGAACAGGATTTAGTGAGGCAATATTCTTCTCCAAAGAGATTGGATCGGTTAAATTGCTTACGAACTGAAGACAGCACAGAGAATGACGAGGCTGTCTTACTACAGAACAGAAGACTAACTAAAATGCTTAGTGGGTCAGAAAGGATTGGTCTGTGTTGGCCCGAGCCTCCACTACACTTACTACCCCACAATGTTTTAGAGAGACCTAACTCATTTAAATCAATAAGATCGTTTAAAACATCCAAGTCCTTTGTTGCATATAATTCTTTCAAGTCAACCATGAATGAAATGCCATCAGGGATTGCTTTGCTTGGAGAAATTGATCTTGAGTCTCTCCTAAAACGAAAGAGAAGACCCTCATATGTTAGAATAGTAAGTAAACAAATGGTTGGTATTTTCCTCACAATATGGGTTCGTAGGAGTTTGCGAAGGCACATTCAGAATGTAAATGTATCTACTGTTGGTGTTGGTGTAATGGGCTACATTGGCAACAAGGGATCCATATCTGTCAGCATGTCCATATATCAGACCCTATTTTGCTTTATATGCACTCACCTGACTTCAGGTGAAAAGGAGGGAGATGAACTTAAAAGAAATGCTGACGTGAGTGAAATACATCGAAGAACTCAATTCCATCCACTTAATGGTATTGGGTTTCCTAAAATAATCCACGACCACGAGCGGATAATCTGGTTGGGTGATCTAAATTACCGCATCAACTTGTCTTATGAGAAGACAAGAGAGCTTATCTCGAGAAAAGAGTGGTCCAAATTAGCTGAGAATGACCAGTTATTGTGGGAGCTTAAAAAGGGTCGTGCATTTGATGGATGGACTGAGGGAAACCTAACTTTTGCTCCGACCTATAAATACGAGAACAATTCAGAGAAGTATTACGGCGAAGATCCAAAAGTTGGAAGGCGTACTCCAGCATGGTGTGACCGTATACTTTCATACGGAAAGGGATTGAAATTGTGCAATTATAGGAGAACTGAAATTAAATTCTCTGATCATAGACCAGTGACAGCCACCTATGTGGCCGAGGTCGAGGTTTTCTGTCCCCGTAAGCTACAGCGAGCTCTAACATTTACAGATGCAGAGATCGAAAATGAGGAAGTAGCAATGGATGTATACTGATTTTTCATCAGTAGCTTAAATACAGCTTTAGTGGTGAGAATTTATCTAATCTTTCATATGCCTCGAATCGATGTTCGATGTTCGATGTTGCGTATGGAGGATTCTTTAAATCAACAAAGATAATTTGGAGTAGCTTTCTGGTGCAACAAATATTGCACGGAAAACCCAAAGAGCTTAATCTTTTATAAAAGCAAGATTCGGGCTATTTGGCTAACAAGATTGTGTTTGGAGAACATGTAGCTCATGAGCTTTGTTGATAACTTGTATCTTACTCCATTCTTTGGATCACATTCTTTCTGTAGTTAGAGATGTGCATTGCAGTGGTTGTGTACATGAGTTATGTGTAGGGTTTCATTTACAAAATATATGGGAATGTACTTCTCTTAGTTTCTTTCTACTTGCACAGGTTTTTCCAAGTATATGAGAGCCTAGCATTGTATAGCAATAAAGTTTGAATAATGTTTAGAGATTGAGTTTTGTATCA 2516 39.75 MRHNSKNQPQLFWPRVVLRKWLNISAKESDYSADTEDDEDVNSSDSETEAECRFRGRESRFKVDNSNRDEPLVDANDVLPRLRRRNSETFRTQYINTKELRICVGTWNVGGKLPPEDLDIDGWIDTNEPADIYVLGLQEIVPLNAGNIFGAEDSRPIARWEDIIRETLNRVRPATTKIKCFSDPPSPSKFKPSDDIPDLEEEILQESDSDIGEEVHPCDEEFFGKENVDGLVGDTNLSLKFPLSELSANTKSGILVEQDLVRQYSSPKRLDRLNCLRTEDSTENDEAVLLQNRRLTKMLSGSERIGLCWPEPPLHLLPHNVLERPNSFKSIRSFKTSKSFVAYNSFKSTMNEMPSGIALLGEIDLESLLKRKRRPSYVRIVSKQMVGIFLTIWVRRSLRRHIQNVNVSTVGVGVMGYIGNKGSISVSMSIYQTLFCFICTHLTSGEKEGDELKRNADVSEIHRRTQFHPLNGIGFPKIIHDHERIIWLGDLNYRINLSYEKTRELISRKEWSKLAENDQLLWELKKGRAFDGWTEGNLTFAPTYKYENNSEKYYGEDPKVGRRTPAWCDRILSYGKGLKLCNYRRTEIKFSDHRPVTATYVAEVEVFCPRKLQRALTFTDAEIENEEVAMDVY 633
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 42377372 42396545 + XM_039028591.1 Bhi04g01737 33346

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01737 633 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 3 11 629 - -
Bhi04g01737 633 SUPERFAMILY DNase I-like 89 170 IPR036691 -
Bhi04g01737 633 MobiDBLite consensus disorder prediction 29 49 - -
Bhi04g01737 633 SUPERFAMILY DNase I-like 358 618 IPR036691 -
Bhi04g01737 633 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 11 629 IPR045849 GO:0004445|GO:0046855
Bhi04g01737 633 Gene3D Endonuclease/exonuclease/phosphatase 79 183 IPR036691 -
Bhi04g01737 633 Gene3D Endonuclease/exonuclease/phosphatase 331 632 IPR036691 -
Bhi04g01737 633 SMART i5p_5 310 608 IPR000300 GO:0016791|GO:0046856
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01737 - - - bhj:120075315 1253.81
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01737 Bhi-Chr4:42377372 Bhi04g01744 Bhi-Chr4:42385492 0 dispersed
Bhi11g00123 Bhi-Chr11:2797421 Bhi04g01737 Bhi-Chr4:42377372 4.43E-160 dispersed
Bhi04g01736 Bhi-Chr4:42377345 Bhi04g01737 Bhi-Chr4:42377372 0 tandem
Bhi04g01737 Bhi-Chr4:42377372 Bhi04g01738 Bhi-Chr4:42377374 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1334 . . . . . . . . Cmo04g02580 Cmo15g00580 . . . . . . Cpe13g00701 Bhi04g01737 . . . . . . Cla08g00742 Cam08g1169 Cec08g0759 Cco08g0867 Clacu08g0876 . Cre08g0677 . . Cone17ag0768 Cone20ag0358 . . . . . . . Bda13g01416 . . Bma01g01429 . . . . . . Car04g02373 Car15g00534 Cpe01g02134 . . . . . . . . . . . . . . . Lsi08g00578 . Chy03g00484 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003115 1 10 2 1 2 1 2 1 1 1 1 1 1 1 1 2 1 2 2 1 1 1 1 1 1 1 1 5 4 1 52
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi04g01737 Bhi_Chr04 FPKM 6.525701 7.874327 21.18239 24.601297 100.905319 97.788376 100.511559 14.158906 12.912581 12.123116