Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi04g01773 | TATTATTTAAGTATAGACATACACAGTTCATGGGTTCGATTTAAGAGAAAGGAATTGGTGAAGAAGTCCGGCCTTGGAGAGAGAGAGAGCGCAAAAAGTTGAGGCTCTTGCTCTGCTCTGGGTTCCCTTCCAAGCTAAAGAAAAAATGATGGATTTCTGGTCATTCTTTAAACGCCTTTTTGTTTGTACTCTCTCCTCAAAGATACATTAACACAACTAGGCCTTTTGTAAAACCGGTTAAATGTCATTCCGTAGCATACTTCGTGATGTGAGGGATGGATTTGGAAGCTTATCAAGGCGTAGTTTTGAGGTGAGGCTGTCTGGAAATTCCAGGGGTAAATCTCATGGACCAGTTCATGAGTTTAATGATGAGCCTCTGCTAATTCAGACTAGCCATTGGGCTAGCCTTCCACCCGAATTATTATGTGATGTGGTCCGAAGACTGGAGGCGAGTGAGAATACTTGGCCTTCTCGGAGAAATGTTGTTGCTTGTGCTGCTGTATGTAGGTCATGGAGGGACATGTGCAGAGAAATGGTCAAAAGCCCCGAGTTGTCTGGAAAAATTACCTTCCCAATTGCCTTGAAGCAGCCTGGGCCACGCGATGGCACTATTCAATGCTTTATCAAGAGGAACAAATCTAATTTAACCTATCATCTTTACCTTTGCCTTAGTCCTGCTTTACTTGTTGAAAATGGGAAATTTCTTCTTTCTGCAAAAAGAACCAGGAGAACTACTTCTACGGAGTATGTTATATCATTGGCTGCGGACGATATATCAAGATCGAGCAACGGTTATATAGGAAAGCTAAGATCAAATTTTCTGGGAACCAAGTTCATTATATATGATACACAACCTCCTTACAACAACAACCAAATTCCGACCCTTGGGCGAAGTCGAAGATTCTACTCCAAAAAGGTCTCACCGAAGGTCCCAGCTGGAAGCTACAGCATTGCACAAATTGCATACGAGTTGAATGTATTAGGTACAAGGGGACCCCGGAGAATGAACTGCACCATGTACTCAATCCCCACTTCATCTCTTGAGCCAGGTTGCTCGGTTCCAGGCCAGCCTGAGCTCAATCCTCGCCCTCTCGAAGACTCATTTCGTAGCATCTCATTCTCCAAGTCAATTGATCATTCCACTGAGTTCAGCAGTTCCCGCTTCTCCGATGTTGCGGGAATGCTTGTTGACGAAGAGGGTGAGGTGAAGGATCGACCCTTGATTCTCCGGAACAAGGCACCTAGATGGCACGAGCAGTTGCAGTGTTGGTGTCTCAATTTTCGTGGGAGGGTGACAGTTGCATCTGTAAAGAACTTTCAGCTAATTGCTGCAACCTCACCTGCTGCAGAAGCCCCTGTACCGTCGCAGCCACCTCCCCAGCCCGCCCAACCTACCCATTCTGACCATGACAAGATCATTCTTCAGTTTGGAAAGGTCGGTAAGGACATGTTTACGATGGATTATCGATACCCGCTGTCTGCATTCCAGGCTTTTGCTATATGTCTCAGCAGCTTTGACACTAAATTGGCATGTGAATAGACAAGAAGAAAGACACCCAACAGAAAACATGAAACAGGAAAATGAACAATTCAGATAATGGTAAGAAATGAAGAAAAAAATTTAGTTGGCAATTAGTGGTTTTCCTTAGTGTTTTTATAGGGTGATGTTTGAATGCAGTTGTATTAAATTAGAAACTCTCACTCACTGCAAAGAATTAGAACAATTTCTTTGAACCTCACTCTCATCATTCATGGAGATTACCTTC | 1766 | 43.71 | MSFRSILRDVRDGFGSLSRRSFEVRLSGNSRGKSHGPVHEFNDEPLLIQTSHWASLPPELLCDVVRRLEASENTWPSRRNVVACAAVCRSWRDMCREMVKSPELSGKITFPIALKQPGPRDGTIQCFIKRNKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYVISLAADDISRSSNGYIGKLRSNFLGTKFIIYDTQPPYNNNQIPTLGRSRRFYSKKVSPKVPAGSYSIAQIAYELNVLGTRGPRRMNCTMYSIPTSSLEPGCSVPGQPELNPRPLEDSFRSISFSKSIDHSTEFSSSRFSDVAGMLVDEEGEVKDRPLILRNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIAATSPAAEAPVPSQPPPQPAQPTHSDHDKIILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE | 432 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 43071404 | 43075749 | - | XM_039029607.1 | Bhi04g01773 | 33382 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi04g01773 | 432 | Pfam | F-box domain | 53 | 99 | IPR001810 | GO:0005515 | |
Bhi04g01773 | 432 | Gene3D | - | 48 | 103 | - | - | |
Bhi04g01773 | 432 | PRINTS | Tubby superfamily signature | 169 | 185 | IPR000007 | - | |
Bhi04g01773 | 432 | PRINTS | Tubby superfamily signature | 185 | 209 | IPR000007 | - | |
Bhi04g01773 | 432 | PRINTS | Tubby superfamily signature | 234 | 261 | IPR000007 | - | |
Bhi04g01773 | 432 | PRINTS | Tubby superfamily signature | 329 | 346 | IPR000007 | - | |
Bhi04g01773 | 432 | PRINTS | Tubby superfamily signature | 347 | 363 | IPR000007 | - | |
Bhi04g01773 | 432 | PRINTS | Tubby superfamily signature | 389 | 408 | IPR000007 | - | |
Bhi04g01773 | 432 | PRINTS | Tubby superfamily signature | 410 | 432 | IPR000007 | - | |
Bhi04g01773 | 432 | Pfam | Tub family | 114 | 427 | IPR000007 | - | |
Bhi04g01773 | 432 | ProSitePatterns | Tub family signature 2. | 417 | 432 | IPR018066 | - | |
Bhi04g01773 | 432 | SUPERFAMILY | F-box domain | 48 | 96 | IPR036047 | GO:0005515 | |
Bhi04g01773 | 432 | PANTHER | TUBBY-RELATED | 1 | 432 | - | - | |
Bhi04g01773 | 432 | PANTHER | TUBBY-LIKE F-BOX PROTEIN | 1 | 432 | - | - | |
Bhi04g01773 | 432 | ProSitePatterns | Tub family signature 1. | 347 | 360 | IPR018066 | - | |
Bhi04g01773 | 432 | SUPERFAMILY | Tubby C-terminal domain-like | 102 | 432 | IPR025659 | - | |
Bhi04g01773 | 432 | MobiDBLite | consensus disorder prediction | 368 | 388 | - | - | |
Bhi04g01773 | 432 | Gene3D | Tubby Protein; Chain A | 113 | 426 | IPR025659 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi04g01773 | Bhi-Chr4:43071404 | Bhi04g02131 | Bhi-Chr4:57228311 | 0 | dispersed | |
Bhi04g01773 | Bhi-Chr4:43071404 | Bhi04g01774 | Bhi-Chr4:43071404 | 0 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
1001 | PF01167 | Tub | 9.10E-116 | CL0395 | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi04g01773 | K19600 | - | csv:101203074 | 849.351 |