Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01789 CAATTCACAATTATCTCCCACACACCCTCTTCTTCGTCATATCATAAGACATAGTCCACTACATACCTGAAAATTCCCATCTCAAACCGCCATGGCTGCAACTTCTGGTGCTGTGCTTAATGGGTTGGGTTCACCCTTCCTCCGTGGAGGTAGCAGAACTCAGACCTTGTTGGCCGGAGTCCGAGGCGGTGTCAATGTTGTTAGCTCTCGCAAGCTTGTCGTTGTCGCTGCTGCTCAGCCTAAGAAGTCTTGGCTCCCTGCCGTTAAGGGCGGTGGCAACTTGGTCGACCCAGAATGGCTTGATGGCTCACTTCCAGGCGACTACGGGTTCGACCCACTGGGATTGGGGAAGGACCCAGCATTTCTGAAGTGGTACAGAGAGGCAGAGCTGATCCACGGCCGGTGGGCAATGGCAGCAGTGGTCGGAATCTTCATAGGACAAGCCTGGAGTGGGATCCCATGGTTCGAAGCTGGAGCAGATCCAGGTGCTATTGCTCCATTCTCCTTCGGATCACTGCTAGGAACTCAGCTTCTGCTAATGGGATGGGTTGAAAGCAAGCGATGGGTGGATTTCTTCAACCCAGAATCTCAATCGGTGGAATGGGCGACGCCATGGTCGAGGACGGCAGAGAATTTCGCAAACGCAACCGGAGAACAAGGGTATCCCGGAGGAAAATTCTTCGATCCATTGGGATTTGCAGGAACTATTAAAGATGGGGTTTACATTCCAGACACAGAGAAATTGGAGAGATTGAAGTTGGCGGAGATCAAACATGCTAGGATCGCCATGTTAGCAATGCTCACCTTCTACTTTGAAGCTGGACAGGGGAAGACACCATTGGGTGCTCTTGGATTGTAAGAAAAACAAAAAACAAAAAAAACCCAAAAATTGTTGATGTGAAGGTAAAATTGTTCATAATTTAACAAAAAAAAAAGGGACGGAAGATGTGTTGATGATTTGGAGATAGATTTTGAATGGGGTTTTGTTGGAGCCTCAAAATCAAACTTCAAAATTGAGTGTGTGCCGTTTCCAAAGTCTCTGCACTTTGCCTTATTGATTCTTAGTTGCTTGAATTGCTCAAA 1083 47.65 MAATSGAVLNGLGSPFLRGGSRTQTLLAGVRGGVNVVSSRKLVVVAAAQPKKSWLPAVKGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLTFYFEAGQGKTPLGALGL 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 43338563 43339969 - XM_039029198.1 Bhi04g01789 33398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01789 255 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 255 IPR001344 GO:0009765|GO:0016020
Bhi04g01789 255 Gene3D Chlorophyll a/b binding protein domain 67 254 - -
Bhi04g01789 255 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC 1 255 - -
Bhi04g01789 255 SUPERFAMILY Chlorophyll a-b binding protein 58 255 - -
Bhi04g01789 255 Pfam Chlorophyll A-B binding protein 67 243 IPR022796 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01789 Bhi-Chr4:43338563 Bhi07g01927 Bhi-Chr7:51621075 1.75E-35 dispersed
Bhi04g01789 Bhi-Chr4:43338563 Bhi08g01147 Bhi-Chr8:36268098 5.19E-28 transposed
Bhi04g01789 Bhi-Chr4:43338563 Bhi02g00306 Bhi-Chr2:5798916 3.75E-28 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01789 K08917 - csv:101204705 491.5