Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01810 ACAAAGCAAATCCAAACCTAAACCCTTGATTTCACAATGGCCTCTGGGGAAGAGAAGTATCGTTCGCTTTTGCGTGGAGATGAAGAGAAAAACACCAAATGGAGATATGGGGTTCCTCCTAACTATGATGTTGTCAACAAACTCTTTGAAGAAGAGAGGACTAATGTATGGCCTGTTGGGTCACTTGAAGAGAGGGTGCAAAGCCTAGTGAAAAATTTTGAGATGGAAATGTTCCATAAGATATCACGCAATGACTTCAGAACATTAGATTTAGACAAGTATACTTTCAGTCTCAATGGAAGAAAGCCTTTAGCTGTTGAAGAAGTAAGTAAACTCGGAGGTTACAATCCCTTTCTTCAGACCTCTCTCCCTGAGGAGTATAGGTACTATAATGCTGCAAAGGAGACTGCCGAATCGTCTCACCGAACTTTCAGTGCGACGTTCCTTAGAGGTTTTGCTCTTGAAATTATCCAAGTTTATTCAGGGCCCCCAAATATTGTGTTCAAGTTCAGGCATTGGGGCTACATGGAGGGGCCTTTTAAAAGCCATGCCCCCACTGGGGAGAGAATTGAATTCTATGGAGTTGCCATTTTTAAGGTGAATGAGAAAGATAAAATTGAGGGGGTAGAGTTCTTTTTTGACCCAGCGGAATTGCTTGGAAAACTCCTGAAAGGTCCTAGCTTGGATGGCTTGGTTGAAAAGGCGGTTTCGAGCTGCCCTGTCTTGAGAAGCACGGGGTAGAATATTAATTTGTGATTCAATATTTCAATCTTCTACCAATTTATTGCCTGGGATTACAAGTATATCAAGAAGCAAACAAATGTAACCACATCATTATCTACTAGTTGAAATAAAGCTCTATCTCTTTCGTGTTCCTTTTTC 882 41.16 MASGEEKYRSLLRGDEEKNTKWRYGVPPNYDVVNKLFEEERTNVWPVGSLEERVQSLVKNFEMEMFHKISRNDFRTLDLDKYTFSLNGRKPLAVEEVSKLGGYNPFLQTSLPEEYRYYNAAKETAESSHRTFSATFLRGFALEIIQVYSGPPNIVFKFRHWGYMEGPFKSHAPTGERIEFYGVAIFKVNEKDKIEGVEFFFDPAELLGKLLKGPSLDGLVEKAVSSCPVLRSTG 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 44649316 44650922 - XM_039029337.1 Bhi04g01810 33419

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01810 234 PANTHER PATHOGEN-RELATED PROTEIN-LIKE 3 233 - -
Bhi04g01810 234 PANTHER PATHOGENESIS-RELATED FAMILY PROTEIN 3 233 - -
Bhi04g01810 234 Gene3D - 107 211 - -
Bhi04g01810 234 SUPERFAMILY NTF2-like 123 209 IPR032710 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01810 - - - csv:101202865 439.884
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01810 Bhi-Chr4:44649316 Bhi07g00009 Bhi-Chr7:489887 7.73E-69 dispersed
Bhi04g01810 Bhi-Chr4:44649316 Bhi04g01811 Bhi-Chr4:44649459 8.58E-140 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1225 . . . . . . . . . Cmo15g00624 . . . . . . . Bhi04g01810 . . . . . Lcy10g1321 . . . . . . . . . . . . . . Cme03g00393 . . . . . . . . . . . . . . Car15g00569 . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002742 0 2 0 0 1 2 2 2 1 2 2 2 2 2 2 2 2 1 2 2 2 2 1 3 3 2 2 2 2 3 53
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi04g01810 Bhi_Chr04 FPKM 42.098118 44.58083 32.730259 35.1544 32.272705 30.362755 32.312721 50.972305 47.307838 49.785568