Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01831 ATTTGTTTCACAATATAGTAATTCCCTCCCAAAACAAAACCAAAAAAAAAATAATAATAACAAATTTAAATAAAAGACTAAAAAAGAAAAATGGGAATAATTAAGGTGGGTGAGGGAAGAGGCAGTGCAGTCGGAAGAGCCGTCGTTGTTGCCGCCGTTATCGGGTTGGTTATGATGTCTCAGTTCGAAAGCGTGGAGGCAGTCGTTTACGTTGTCGGCGATTCCCGTGGATGGACTTTTAACGTCCAAGATTGGCCCAAAGGAAAACGTTTTCGTGCTGGCGATATTCTCAAGTTTAATTACAACCCGACATTTCATAACGTGGTGGTGGTGAACCAAGTTGGGTACGCCAGCTGCAGAACTCCGGCGGGTGCGAAAGTGTACAAATCCGGCAGCGATCAGATAAAGTTACCCAAAGGAAAAAGCTTTTTCATCTGCAACTTCCCCGGCCACTGTGAGTCCGGCATGAAGATTGCCGTCGATGCTCTCTAAAATTACTTCCCAACGACGAACCCTACCCTTACTCACTTTATTTACTGCTGTTAAAATAAAAAGTAAAACTCTGTCGTCCTTTATTTATAATTCATATATTGTGCGTCTTTTGCTTTTTCTATGCCAACTGTCGTTTCTTTCCTCCACCACATAAGATTTTTCTTGTTTTTTTTCCTTTAATTTTTCTGTATGTGTTCGATTTTAGCAAAATATTCGAATTATTATATACCTAATAAATTCAAGAAAGTGATGCACTCCAAA 753 39.58 MGIIKVGEGRGSAVGRAVVVAAVIGLVMMSQFESVEAVVYVVGDSRGWTFNVQDWPKGKRFRAGDILKFNYNPTFHNVVVVNQVGYASCRTPAGAKVYKSGSDQIKLPKGKSFFICNFPGHCESGMKIAVDAL 133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 45187337 45189089 + XM_039029748.1 Bhi04g01831 33440

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01831 133 CDD Plantacyanin 39 132 IPR041844 -
Bhi04g01831 133 ProSiteProfiles Phytocyanin domain profile. 38 133 IPR003245 GO:0009055
Bhi04g01831 133 SUPERFAMILY Cupredoxins 39 132 IPR008972 -
Bhi04g01831 133 ProSitePatterns Type-1 copper (blue) proteins signature. 110 126 IPR028871 -
Bhi04g01831 133 PANTHER BLUE COPPER PROTEIN 15 131 IPR039391 GO:0009055
Bhi04g01831 133 Gene3D - 38 132 IPR008972 -
Bhi04g01831 133 Pfam Plastocyanin-like domain 48 126 IPR003245 GO:0009055
Bhi04g01831 133 PANTHER BLUE PROTEIN, PUTATIVE-RELATED 15 131 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01831 - - - csv:101220519 200.675
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01629 Bhi-Chr1:34248568 Bhi04g01831 Bhi-Chr4:45187337 1.88E-47 dispersed
Bhi01g01630 Bhi-Chr1:34301712 Bhi04g01831 Bhi-Chr4:45187337 2.75E-50 dispersed
Bhi04g01831 Bhi-Chr4:45187337 Bhi05g00351 Bhi-Chr5:6833206 1.21E-23 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1192 Blo01g01321 . Bda01g00688 . Bpe02g00618 . . Bma01g02106 . Cmo15g00642 . . . . Sed01g0954 . . Bhi04g01831 Tan11g1205 Cmetu03g0089 . Hepe02g2751 . Lcy10g1303 . . . . . . . . . . Cone20ag0408 . . . Cme03g00426 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi08g00269 . Chy03g00573 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000300 8 5 4 2 2 5 6 3 5 4 3 5 8 4 4 7 5 4 3 4 4 5 2 4 6 5 4 8 6 4 139
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi04g01831 Bhi_Chr04 FPKM 0.0 0.0 3.747516 3.446267 3.154021 2.904958 3.203925 0.0 0.0 0.0