Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01846 ATGAATTTTCCATCCAAATTTCCTAATTTTTTTAATATATGTGGACCAAACGCCAAAAAGATTAGCTTCCTCAGTGATGGATCTCAATATCGTTGCCGATGTTTGGATGGTTTCAGAGGGAATCCATATCACCCTCTAGGTTGTCAAGATGTAGATGAATGCAAGGAAGGGCTGAATGATTGCGTAGATAAGCATAGGTGTGTTAACACACGTGGAAACTATACCTGCAGTTGTCGTAAGAACTATAAAGGAGATGGAAGAAAGAGCGGAAAAGGATGCAATCCAATTCAAATCAATAAAAGCTTCACTCAATACATGATCAGATGTACGGTAGGGCTAACAGTTTTAGTGATTGGGTGCACATTTTTATGTTTGGGTTATGCAAAGTGGAAGCTCATTCAACAGAAGAATAATTTCTTCAAGAAGAATGGAGGCTTGGTGCTTCAACATCTTTCTCAGTCGCAATCACAGGTGGATACGTTCAGAATTTTCACCCATGAAGAGTTGAAGAAGGCAACAAACAAGTTCAATGACAGTGCAGTGGTGGGAAAAGGTGGCTTTGGCACCGTTTACAAAGCCGTCTTAGACGACGGTTTGATAGTCGCAATCAAGAAATCAAAACTACTTGACCAATCTCAAACTGACCAATTCATTAACGAAGTCATTGTTTTGTCACAAATCAACCATCGCAACGTCGTCAAGCTAATAGGGTGCTGTTTGGAGACAAAAGTTCCTTTGTTGGTCTATGAGTTCGTAACCAACGGCACTCTCTTTGAACACATCCACAACAAAATCGACCATGCTCCTCTTTCCTGGGAAATTCGACTTAAGATAGCTTCAAAAATTGCCAGCGTCCTCGAGTATTTGCATTCTTCTACTTGTATTCCCATCATCCACAAAGATATCAAGTCTTCTAATGTACTTTTAGACCATGATTACACTGCAAAACTGTCTGATTTTGGAGCTTCGAAGCTGGTTCCACTAGATCATACTCAGCTATCCACAATGGTGCAAGGGACACTTGGATATTTAGACCCGNAGTACTTGTTGACAAGTGAATTGACGAAGAAGAGCGACGTGTACAGCTTTAGAATTTTGGTTTTTGAGCTTATAACGGGAAGGAAGGCAGTGCGTTTTGATGTGCCAGAAGCCGAAAGAACTCTAGCTAAGATAGCCCTGTGTGCGATGAATGAAAATCGTTTCGAAGAAATTGTTGAGGAGGGATTGGCAACGGAAGCAAATATTGAGGAGATAAAAGAAGTGGGAAAGCTAGCAAAAGAGTGCGTAAGAGTAAAAGGTGATGAGCGTCCTACCATGAAGGAGGTGGCTTTGGAGTTGGCGGAGCTGCGAATGCTACATGCTTAA 1365 41.32 MNFPSKFPNFFNICGPNAKKISFLSDGSQYRCRCLDGFRGNPYHPLGCQDVDECKEGLNDCVDKHRCVNTRGNYTCSCRKNYKGDGRKSGKGCNPIQINKSFTQYMIRCTVGLTVLVIGCTFLCLGYAKWKLIQQKNNFFKKNGGLVLQHLSQSQSQVDTFRIFTHEELKKATNKFNDSAVVGKGGFGTVYKAVLDDGLIVAIKKSKLLDQSQTDQFINEVIVLSQINHRNVVKLIGCCLETKVPLLVYEFVTNGTLFEHIHNKIDHAPLSWEIRLKIASKIASVLEYLHSSTCIPIIHKDIKSSNVLLDHDYTAKLSDFGASKLVPLDHTQLSTMVQGTLGYLDPXYLLTSELTKKSDVYSFRILVFELITGRKAVRFDVPEAERTLAKIALCAMNENRFEEIVEEGLATEANIEEIKEVGKLAKECVRVKGDERPTMKEVALELAELRMLHA 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 45702780 45710519 + XM_039029986.1 Bhi04g01846 33455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01846 454 CDD EGF_CA 50 85 - -
Bhi04g01846 454 SMART serkin_6 176 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g01846 454 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 67 78 IPR000152 -
Bhi04g01846 454 Gene3D Transferase(Phosphotransferase) domain 1 252 453 - -
Bhi04g01846 454 CDD STKc_IRAK 182 449 - -
Bhi04g01846 454 Gene3D Laminin 10 51 - -
Bhi04g01846 454 ProSiteProfiles EGF-like domain profile. 50 85 IPR000742 -
Bhi04g01846 454 ProSiteProfiles Protein kinase domain profile. 176 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g01846 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 297 309 IPR008271 GO:0004672|GO:0006468
Bhi04g01846 454 Gene3D Laminin 52 89 - -
Bhi04g01846 454 Pfam Protein kinase domain 177 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g01846 454 SMART egfca_6 50 94 IPR001881 GO:0005509
Bhi04g01846 454 Gene3D Phosphorylase Kinase; domain 1 147 251 - -
Bhi04g01846 454 SUPERFAMILY Protein kinase-like (PK-like) 152 446 IPR011009 -
Bhi04g01846 454 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 25 452 - -
Bhi04g01846 454 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 25 452 IPR045274 GO:0007166
Bhi04g01846 454 ProSitePatterns Calcium-binding EGF-like domain signature. 50 76 IPR018097 GO:0005509
Bhi04g01846 454 SUPERFAMILY EGF/Laminin 49 85 - -
Bhi04g01846 454 ProSitePatterns Protein kinases ATP-binding region signature. 182 205 IPR017441 GO:0005524
Bhi04g01846 454 Pfam Calcium-binding EGF domain 50 87 IPR001881 GO:0005509
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01846 Bhi-Chr4:45702780 Bhi04g01848 Bhi-Chr4:45986355 0 dispersed
Bhi04g01845 Bhi-Chr4:45603516 Bhi04g01846 Bhi-Chr4:45702780 0 tandem
Bhi04g01846 Bhi-Chr4:45702780 Bhi04g01847 Bhi-Chr4:45797137 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87697 PF00069 Pkinase 9.70E-46 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01846 - - bhj:120076222 910.212