Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi04g01848 GGCAAAGGAAGCTGGGAGAGAAATTGAACTTTGGTTCTTGCTTCTTCCTTGCGTAGTGTCGGGGCTTTCTTGGTTACAGAGAAAGAAATAAACAGTCATCTTGCAGTGAATTAATTGGCAGATCAAGGCAGGCATAAGGCATGGGACACCCCACAGAAAAGCTTGTTCTACTCATGATGTTGTCATTGTCAGCAGCGGCCTCGCAGGACTGTGACGAACGATGGTGTGGGAACATGGAAATTCCGTATCCATTCGGAACGAAAGAGCAGTGTTATCTAAGTGACACTTTCTTGATCACCTGCAACAAAACATATCATCCTCCAAGAGCATTTATCGGGAATGGTAACGTTGATGTAACAAATATATCGATCGACGACAGCGAGCTCGACATCTCGTTTTTCATAGCCAAAGATTGCTACACACAAAATGGTTCCCAGAATGGCAGCCATAACTTCGCCACACTTCAAACGCCATTATTCACAATTTCTAACACCAAGAACAAGTTCGTCGCAATCGGTTGCGATACATCAGCTCATATTTCTGGCAATATCCAAGGGGATACCTATAGAGGTGGGTGCATGGCCTTGTGTGGAAACACTACTAAAACTATAAGAGATGGGCACTGCGCTGGGAATGGGTGCTGTGAGTTGGAAATTCCTGAAGGCCTCAAATATTTGGAGTTGGAAGTGAAGAGCTTCAACAAACACTCCGAGGTATTTAAGTTTAATCCATGTGGGTATGCTTTTGTTATTCAACATGACAAATTCAATTTCTCCTCCAAATATATTTCCAATTTTACACCACTTGAAGTTCCATTGGTGCTTGATTGGGCAATCCCAAACAATACTTGCTCAAAATCAAACAACGAAACCAATTGCAATAATATATGTGGACCAAATACCAAAAAGATTAACTTCCTCAATGATGGTTCTGAATATCGTTGCCGATGTTTGGATGGTTTCAAGGGAAATCCATATCGTCCTCAAGGTTGTGAAGATATAAATGAATGCAAGGATAAAAGGTTGAATGACTGTGAATATAAACACATGTGTTCTAACACACAAGGAAACTATACCTGCGGTTGTCCTAAGAACTATAAAGGAGATGGAAGGAGAGGATGCATCCCAACATATAAGGCCTTTGTTCAATACATCGTTGGATGTACGATAGGGTTAACAATTTTAGTGATTGGGTGCACATTGTTATGCTTGGGGTATGCAAAGTGGAAGGCCAACCACCAAAAGAACAAATTTTTCAAGAAAAACGGAGGCTTTTTGCTTGAAGAACATCTTTCTAAGTGGGAATCACCGGTCGAGATATTCAGAATTTTCACCCATGAAGAGTTGAAGAAGGCTACAAACAAGTTCCATGAAAGCACAGTGGTGGGAAAAGGTGGCTTTGGCACTGTTTACAAAGGTGTCTTAGATGACGGCTTGATGGTTGCAATTAAGAAATCAAAATTAGTGGATCAATCCCAAACTGACCAATTCATTAACGAAGTCATTGTTTTGTCCCAAATCAACCATCGCAACGTGGTCAAGCTTTTGGGGTGTTGTTTGGAGACAAAAGTTCCTTTGTTGGTCTACGAGTTTGTAACCAACCGCACTCTCTTTGAACACCTCCACAACAAAACCAATCATCCCCCTCTTTCTTGGGAAACTCGTTTGAAAATAGCTTCAGAAATTGCCAGCGTCCTCGCATATTTGCATTCTTCAACTTCAAATCCCATCATTCATAGAGATATCAAGTCTTCTAATGTACTTTTAGACCATGATTACACTGCAAAGTTGTCCGATTTTGGAGCTTCGAAGCTGGTCCCATTGAATCATACTCAGTTATCCACAATGGTACAAGGGACTCTTGGATATTTGGACCCTGAATACTTGTTGACGAGTGAGTTGACGGAAAAAAGCGACGTATACAGCTTTGGAATTTTGCTTTTTGAACTTATAACAGGGAAGAAGGCTGTGCGTTTTGACGTGCCAGAAGAAGAAAGAATTCTAGCCAAGATAGTCCTATATGCGATGAATGAAAATCGTTTGGAAGAAATTGTTGAGCAGGGTCTGGCAACGGAAGGAAATATTGACGAGATAAAAGAGGTGGCAAAGCTAGCAAAAGAGTGTGTAAAAGTAAAAGGGGAGGAGCGTCCCAACATGAAGGAGGTGGCTATGGAGTTGGAGGGGCTGCAAATGTTGCATGGTTAACCTCATTTCAACATGTCGGCAAATGAACTTTAGACTCAAACCTTTTTCTTTTTTACATATGTGGGAATGAGACATTGAACCTCCAATCTTGAAGTTGATAGTAGATTATTCATGCTAGTTGAACACTGTCCATTTATTATTAATTTGTCTGACAATGTGTATCACTAAATACGATGTATAGTCGTATAATGTTTAAAATTTATAAATGATAGATCTATTACTTA 2428 40.36 MGHPTEKLVLLMMLSLSAAASQDCDERWCGNMEIPYPFGTKEQCYLSDTFLITCNKTYHPPRAFIGNGNVDVTNISIDDSELDISFFIAKDCYTQNGSQNGSHNFATLQTPLFTISNTKNKFVAIGCDTSAHISGNIQGDTYRGGCMALCGNTTKTIRDGHCAGNGCCELEIPEGLKYLELEVKSFNKHSEVFKFNPCGYAFVIQHDKFNFSSKYISNFTPLEVPLVLDWAIPNNTCSKSNNETNCNNICGPNTKKINFLNDGSEYRCRCLDGFKGNPYRPQGCEDINECKDKRLNDCEYKHMCSNTQGNYTCGCPKNYKGDGRRGCIPTYKAFVQYIVGCTIGLTILVIGCTLLCLGYAKWKANHQKNKFFKKNGGFLLEEHLSKWESPVEIFRIFTHEELKKATNKFHESTVVGKGGFGTVYKGVLDDGLMVAIKKSKLVDQSQTDQFINEVIVLSQINHRNVVKLLGCCLETKVPLLVYEFVTNRTLFEHLHNKTNHPPLSWETRLKIASEIASVLAYLHSSTSNPIIHRDIKSSNVLLDHDYTAKLSDFGASKLVPLNHTQLSTMVQGTLGYLDPEYLLTSELTEKSDVYSFGILLFELITGKKAVRFDVPEEERILAKIVLYAMNENRLEEIVEQGLATEGNIDEIKEVAKLAKECVKVKGEERPNMKEVAMELEGLQMLHG 687
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 45986355 45990473 - XM_039030621.1 Bhi04g01848 33457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi04g01848 687 CDD STKc_IRAK 415 682 - -
Bhi04g01848 687 Pfam Wall-associated receptor kinase galacturonan-binding 24 83 IPR025287 GO:0030247
Bhi04g01848 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 530 542 IPR008271 GO:0004672|GO:0006468
Bhi04g01848 687 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 20 685 IPR045274 GO:0007166
Bhi04g01848 687 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 20 685 - -
Bhi04g01848 687 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 304 315 IPR000152 -
Bhi04g01848 687 Gene3D Transferase(Phosphotransferase) domain 1 485 686 - -
Bhi04g01848 687 SMART egfca_6 286 328 IPR001881 GO:0005509
Bhi04g01848 687 SUPERFAMILY EGF/Laminin 281 323 - -
Bhi04g01848 687 ProSitePatterns Calcium-binding EGF-like domain signature. 286 313 IPR018097 GO:0005509
Bhi04g01848 687 Gene3D Phosphorylase Kinase; domain 1 381 484 - -
Bhi04g01848 687 Gene3D Plasmodium vivax P25 domain 228 335 - -
Bhi04g01848 687 ProSitePatterns Protein kinases ATP-binding region signature. 415 438 IPR017441 GO:0005524
Bhi04g01848 687 Pfam Protein kinase domain 409 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g01848 687 Pfam Calcium-binding EGF domain 286 327 IPR001881 GO:0005509
Bhi04g01848 687 SMART serkin_6 409 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g01848 687 ProSiteProfiles Protein kinase domain profile. 409 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi04g01848 687 SUPERFAMILY Protein kinase-like (PK-like) 389 680 IPR011009 -
Bhi04g01848 687 ProSiteProfiles EGF-like domain profile. 286 328 IPR000742 -
Bhi04g01848 687 SMART egf_5 236 285 IPR000742 -
Bhi04g01848 687 SMART egf_5 289 328 IPR000742 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01845 Bhi-Chr4:45603516 Bhi04g01848 Bhi-Chr4:45986355 0 dispersed
Bhi04g01846 Bhi-Chr4:45702780 Bhi04g01848 Bhi-Chr4:45986355 0 dispersed
Bhi04g01848 Bhi-Chr4:45986355 Bhi04g01850 Bhi-Chr4:46165461 0 dispersed
Bhi04g01847 Bhi-Chr4:45797137 Bhi04g01848 Bhi-Chr4:45986355 0 tandem
Bhi04g01848 Bhi-Chr4:45986355 Bhi04g01849 Bhi-Chr4:46101641 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87699 PF00069 Pkinase 4.70E-49 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi04g01848 - - cmos:111461403 890.182